RNA–Protein interactions for RNA: ENST00000529611.5

CCDC90B-213, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2 BASIC

Gene CCDC90B, Length 1,986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-213ENST00000529611 NCOA5Q9HCD5 579 aaKnown RBP18.19■□□□□ 0.5
CCDC90B-213ENST00000529611 ANO8Q9HCE9 1232 aaPredicted RBP18.19■□□□□ 0.5
CCDC90B-213ENST00000529611 INCENPQ9NQS7 918 aa18.19■□□□□ 0.5
CCDC90B-213ENST00000529611 BRPF3Q9ULD4 1205 aa18.19■□□□□ 0.5
CCDC90B-213ENST00000529611 NAP1L2Q9ULW6 460 aaPredicted RBP18.19■□□□□ 0.5
CCDC90B-213ENST00000529611 PARP3Q9Y6F1 533 aa18.19■□□□□ 0.5
CCDC90B-213ENST00000529611 CCDC88AQ3V6T2 1871 aa18.19■□□□□ 0.5
CCDC90B-213ENST00000529611 PPEF1O14829 653 aaPredicted RBP18.19■□□□□ 0.5
CCDC90B-213ENST00000529611 MSL1Q68DK7 614 aa18.19■□□□□ 0.5
CCDC90B-213ENST00000529611 CDC37L1Q7L3B6 337 aa18.19■□□□□ 0.5
CCDC90B-213ENST00000529611 WDR66Q8TBY9 1149 aa18.19■□□□□ 0.5
CCDC90B-213ENST00000529611 CAMKK2Q96RR4 588 aa18.19■□□□□ 0.5
CCDC90B-213ENST00000529611 POLLQ9UGP5 575 aa18.19■□□□□ 0.5
CCDC90B-213ENST00000529611 KLF18A0A0U1RQI7 1052 aa18.18■□□□□ 0.5
CCDC90B-213ENST00000529611 EZH2Q15910 746 aaKnown RBP18.18■□□□□ 0.5
CCDC90B-213ENST00000529611 SPTY2D1Q68D10 685 aaPredicted RBP18.18■□□□□ 0.5
CCDC90B-213ENST00000529611 TMED8Q6PL24 325 aaPredicted RBP18.18■□□□□ 0.5
CCDC90B-213ENST00000529611 TBC1D16Q8TBP0 767 aa18.18■□□□□ 0.5
CCDC90B-213ENST00000529611 STAG1Q8WVM7 1258 aa18.18■□□□□ 0.5
CCDC90B-213ENST00000529611 ANGEL1Q9UNK9 670 aaKnown RBP18.18■□□□□ 0.5
CCDC90B-213ENST00000529611 ATP6V1DQ9Y5K8 247 aa18.18■□□□□ 0.5
CCDC90B-213ENST00000529611 SH2B2O14492 632 aaPredicted RBP18.17■□□□□ 0.5
CCDC90B-213ENST00000529611 EN1Q05925 392 aaPredicted RBP18.17■□□□□ 0.5
CCDC90B-213ENST00000529611 SP8Q8IXZ3 490 aa18.17■□□□□ 0.5
CCDC90B-213ENST00000529611 DDX11Q96FC9 970 aa18.17■□□□□ 0.5
CCDC90B-213ENST00000529611 CNNM2Q9H8M5 875 aa18.17■□□□□ 0.5
CCDC90B-213ENST00000529611 CD209Q9NNX6 404 aa18.17■□□□□ 0.5
CCDC90B-213ENST00000529611 HPS5Q9UPZ3 1129 aa18.17■□□□□ 0.5
CCDC90B-213ENST00000529611 COL11A2P13942 1736 aaPredicted RBP18.17■□□□□ 0.5
CCDC90B-213ENST00000529611 PTPDC1A2A3K4 754 aa18.17■□□□□ 0.5
CCDC90B-213ENST00000529611 NPR1P16066 1061 aa18.17■□□□□ 0.5
CCDC90B-213ENST00000529611 PPARAQ07869 468 aa18.17■□□□□ 0.5
CCDC90B-213ENST00000529611 MFSD6Q6ZSS7 791 aa18.17■□□□□ 0.5
CCDC90B-213ENST00000529611 GPT2Q8TD30 523 aa18.17■□□□□ 0.5
CCDC90B-213ENST00000529611 TMEM87BQ96K49 555 aa18.17■□□□□ 0.5
CCDC90B-213ENST00000529611 GDPD2Q9HCC8 539 aa18.17■□□□□ 0.5
CCDC90B-213ENST00000529611 KIAA1551Q9HCM1 1747 aa18.16■□□□□ 0.5
CCDC90B-213ENST00000529611 GOLGA8BA8MQT2 603 aa18.16■□□□□ 0.5
CCDC90B-213ENST00000529611 IGSF3O75054 1194 aa18.16■□□□□ 0.5
CCDC90B-213ENST00000529611 IL1R1P14778 569 aa18.16■□□□□ 0.5
CCDC90B-213ENST00000529611 PDE6BP35913 854 aa18.16■□□□□ 0.5
CCDC90B-213ENST00000529611 HMGN5P82970 282 aaKnown RBP18.16■□□□□ 0.5
CCDC90B-213ENST00000529611 SLC15A2Q16348 729 aa18.16■□□□□ 0.5
CCDC90B-213ENST00000529611 DZIP1Q86YF9 867 aaKnown RBP18.16■□□□□ 0.5
CCDC90B-213ENST00000529611 CHMP4CQ96CF2 233 aa18.16■□□□□ 0.5
CCDC90B-213ENST00000529611 KRT23Q9C075 422 aa18.16■□□□□ 0.5
CCDC90B-213ENST00000529611 AATFQ9NY61 560 aaKnown RBP eCLIP18.16■□□□□ 0.5
CCDC90B-213ENST00000529611 ZSWIM5Q9P217 1185 aa18.16■□□□□ 0.5
CCDC90B-213ENST00000529611 ANAPC4Q9UJX5 808 aa18.16■□□□□ 0.5
CCDC90B-213ENST00000529611 ATP6V0A2Q9Y487 856 aa18.16■□□□□ 0.5
CCDC90B-213ENST00000529611 KDM4AO75164 1064 aa18.15■□□□□ 0.5
CCDC90B-213ENST00000529611 LDHBP07195 334 aaKnown RBP18.15■□□□□ 0.5
CCDC90B-213ENST00000529611 GIMAP6Q6P9H5 292 aa18.15■□□□□ 0.5
CCDC90B-213ENST00000529611 TMEM87AQ8NBN3 555 aa18.15■□□□□ 0.5
CCDC90B-213ENST00000529611 IGDCC4Q8TDY8 1250 aa18.15■□□□□ 0.5
CCDC90B-213ENST00000529611 CNPY2Q9Y2B0 182 aa18.15■□□□□ 0.5
CCDC90B-213ENST00000529611 BAZ2AQ9UIF9 1905 aaKnown RBP18.15■□□□□ 0.5
CCDC90B-213ENST00000529611 FAM184AQ8NB25 1140 aa18.15■□□□□ 0.5
CCDC90B-213ENST00000529611 FBXO41Q8TF61 875 aa18.15■□□□□ 0.5
CCDC90B-213ENST00000529611 GRIK5Q16478 980 aa18.14■□□□□ 0.49
CCDC90B-213ENST00000529611 USP48Q86UV5 1035 aa18.14■□□□□ 0.49
CCDC90B-213ENST00000529611 FERMT3Q86UX7 667 aa18.14■□□□□ 0.49
CCDC90B-213ENST00000529611 RNF41Q9H4P4 317 aaPredicted RBP18.14■□□□□ 0.49
CCDC90B-213ENST00000529611 LY9Q9HBG7 655 aa18.14■□□□□ 0.49
CCDC90B-213ENST00000529611 SENP2Q9HC62 589 aa18.14■□□□□ 0.49
CCDC90B-213ENST00000529611 MINDY4BA8MYZ0 360 aa18.13■□□□□ 0.49
CCDC90B-213ENST00000529611 C6orf229H3BNL8 230 aa18.13■□□□□ 0.49
CCDC90B-213ENST00000529611 SMIM22K7EJ46 135 aa18.13■□□□□ 0.49
CCDC90B-213ENST00000529611 DNM1Q05193 864 aaKnown RBP18.13■□□□□ 0.49
CCDC90B-213ENST00000529611 CRNKL1Q9BZJ0 848 aaKnown RBP18.13■□□□□ 0.49
CCDC90B-213ENST00000529611 DUOX1Q9NRD9 1551 aa18.13■□□□□ 0.49
CCDC90B-213ENST00000529611 NCLP19338 710 aaKnown RBP18.13■□□□□ 0.49
CCDC90B-213ENST00000529611 ALDH1B1P30837 517 aa18.13■□□□□ 0.49
CCDC90B-213ENST00000529611 RRP12Q5JTH9 1297 aaKnown RBP18.13■□□□□ 0.49
CCDC90B-213ENST00000529611 APOA5Q6Q788 366 aa18.13■□□□□ 0.49
CCDC90B-213ENST00000529611 SGMS1Q86VZ5 419 aa18.13■□□□□ 0.49
CCDC90B-213ENST00000529611 RAB11FIP4Q86YS3 637 aa18.13■□□□□ 0.49
CCDC90B-213ENST00000529611 STK11IPQ8N1F8 1099 aa18.13■□□□□ 0.49
CCDC90B-213ENST00000529611 MASTLQ96GX5 879 aa18.13■□□□□ 0.49
CCDC90B-213ENST00000529611 TOMM22Q9NS69 142 aa18.13■□□□□ 0.49
CCDC90B-213ENST00000529611 KIF3AQ9Y496 699 aa18.13■□□□□ 0.49
CCDC90B-213ENST00000529611 DHX16O60231 1041 aaKnown RBP18.12■□□□□ 0.49
CCDC90B-213ENST00000529611 LIFRP42702 1097 aa18.12■□□□□ 0.49
CCDC90B-213ENST00000529611 TMEM67Q5HYA8 995 aa18.12■□□□□ 0.49
CCDC90B-213ENST00000529611 CTR9Q6PD62 1173 aa18.12■□□□□ 0.49
CCDC90B-213ENST00000529611 DCP1AQ9NPI6 582 aaPredicted RBP18.12■□□□□ 0.49
CCDC90B-213ENST00000529611 STK32BQ9NY57 414 aa18.12■□□□□ 0.49
CCDC90B-213ENST00000529611 CYP2D7A0A087X1C5 515 aa18.11■□□□□ 0.49
CCDC90B-213ENST00000529611 FSD2A1L4K1 749 aa18.11■□□□□ 0.49
CCDC90B-213ENST00000529611 IFIT3O14879 490 aaKnown RBP18.11■□□□□ 0.49
CCDC90B-213ENST00000529611 PPFIA3O75145 1194 aa18.11■□□□□ 0.49
CCDC90B-213ENST00000529611 MBD3O95983 291 aa18.11■□□□□ 0.49
CCDC90B-213ENST00000529611 FDPSP14324 419 aaKnown RBP18.11■□□□□ 0.49
CCDC90B-213ENST00000529611 CAVIN1Q6NZI2 390 aaKnown RBP18.11■□□□□ 0.49
CCDC90B-213ENST00000529611 OLFM4Q6UX06 510 aa18.11■□□□□ 0.49
CCDC90B-213ENST00000529611 ATP8A2Q9NTI2 1148 aa18.11■□□□□ 0.49
CCDC90B-213ENST00000529611 H3BQV1 296 aa18.11■□□□□ 0.49
CCDC90B-213ENST00000529611 GADD45BO75293 160 aaPredicted RBP18.11■□□□□ 0.49
CCDC90B-213ENST00000529611 DIXDC1Q155Q3 683 aa18.11■□□□□ 0.49
CCDC90B-213ENST00000529611 QSER1Q2KHR3 1735 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms