RNA–Protein interactions for RNA: ENST00000529529.1

TRIM3-209, Transcript of tripartite motif containing 3, humanhuman

TSL 4

Gene TRIM3, Length 785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-209ENST00000529529 USP40Q9NVE5 1235 aa20.05■□□□□ 0.8
TRIM3-209ENST00000529529 AKAP2Q9Y2D5 859 aa20.05■□□□□ 0.8
TRIM3-209ENST00000529529 SALL1Q9NSC2 1324 aa20.04■□□□□ 0.8
TRIM3-209ENST00000529529 A0A1B0GUL7 405 aa20.04■□□□□ 0.8
TRIM3-209ENST00000529529 GTF2A2P52657 109 aa20.04■□□□□ 0.8
TRIM3-209ENST00000529529 TCP10Q12799 353 aa20.04■□□□□ 0.8
TRIM3-209ENST00000529529 CRHR2Q13324 411 aa20.04■□□□□ 0.8
TRIM3-209ENST00000529529 DCAF15Q66K64 600 aa20.04■□□□□ 0.8
TRIM3-209ENST00000529529 DIEXFQ68CQ4 756 aaKnown RBP20.04■□□□□ 0.8
TRIM3-209ENST00000529529 FBXO46Q6PJ61 603 aaPredicted RBP20.04■□□□□ 0.8
TRIM3-209ENST00000529529 ZKSCAN4Q969J2 545 aaPredicted RBP20.04■□□□□ 0.8
TRIM3-209ENST00000529529 OTUD5Q96G74 571 aa20.04■□□□□ 0.8
TRIM3-209ENST00000529529 NEUROD6Q96NK8 337 aa20.04■□□□□ 0.8
TRIM3-209ENST00000529529 WRNIP1Q96S55 665 aa20.04■□□□□ 0.8
TRIM3-209ENST00000529529 CCL15-CCL14A0A0B4J2E2 113 aa20.03■□□□□ 0.8
TRIM3-209ENST00000529529 CCL15Q16663 113 aa20.03■□□□□ 0.8
TRIM3-209ENST00000529529 ZKSCAN2Q63HK3 967 aa20.03■□□□□ 0.8
TRIM3-209ENST00000529529 XAGE2Q96GT9 111 aa20.03■□□□□ 0.8
TRIM3-209ENST00000529529 NFIAQ12857 509 aa20.02■□□□□ 0.8
TRIM3-209ENST00000529529 ERO1BQ86YB8 467 aa20.02■□□□□ 0.8
TRIM3-209ENST00000529529 ZGPATQ8N5A5 531 aaKnown RBP20.02■□□□□ 0.8
TRIM3-209ENST00000529529 TMEM57Q8N5G2 664 aa20.02■□□□□ 0.8
TRIM3-209ENST00000529529 BRI3BPQ8WY22 251 aa20.02■□□□□ 0.8
TRIM3-209ENST00000529529 ZNF341Q9BYN7 854 aa20.02■□□□□ 0.8
TRIM3-209ENST00000529529 ABCF2Q9UG63 623 aa20.02■□□□□ 0.8
TRIM3-209ENST00000529529 SNCAIPQ9Y6H5 919 aa20.02■□□□□ 0.8
TRIM3-209ENST00000529529 SPDYE5A6NIY4 337 aa20.01■□□□□ 0.79
TRIM3-209ENST00000529529 ZBTB22O15209 634 aa20.01■□□□□ 0.79
TRIM3-209ENST00000529529 G3BP1Q13283 466 aaKnown RBP eCLIP20.01■□□□□ 0.79
TRIM3-209ENST00000529529 RASGRF1Q13972 1273 aa20.01■□□□□ 0.79
TRIM3-209ENST00000529529 TRIM17Q9Y577 477 aa20.01■□□□□ 0.79
TRIM3-209ENST00000529529 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.01■□□□□ 0.79
TRIM3-209ENST00000529529 PNMA6EA0A0J9YXQ4 647 aa20■□□□□ 0.79
TRIM3-209ENST00000529529 MVPQ14764 893 aaKnown RBP20■□□□□ 0.79
TRIM3-209ENST00000529529 GORABQ5T7V8 394 aa20■□□□□ 0.79
TRIM3-209ENST00000529529 SPTY2D1Q68D10 685 aaPredicted RBP20■□□□□ 0.79
TRIM3-209ENST00000529529 ERO1AQ96HE7 468 aa20■□□□□ 0.79
TRIM3-209ENST00000529529 FAM198AQ9UFP1 575 aa20■□□□□ 0.79
TRIM3-209ENST00000529529 SP3Q02447 781 aa19.99■□□□□ 0.79
TRIM3-209ENST00000529529 DZIP1Q86YF9 867 aaKnown RBP19.99■□□□□ 0.79
TRIM3-209ENST00000529529 ZFPM1Q8IX07 1006 aa19.99■□□□□ 0.79
TRIM3-209ENST00000529529 FAM43AQ8N2R8 423 aa19.99■□□□□ 0.79
TRIM3-209ENST00000529529 CD99L2Q8TCZ2 262 aa19.99■□□□□ 0.79
TRIM3-209ENST00000529529 ZFYVE28Q9HCC9 887 aa19.99■□□□□ 0.79
TRIM3-209ENST00000529529 RPAP1Q9BWH6 1393 aaPredicted RBP19.98■□□□□ 0.79
TRIM3-209ENST00000529529 IRF6O14896 467 aa19.98■□□□□ 0.79
TRIM3-209ENST00000529529 CETPP11597 493 aa19.98■□□□□ 0.79
TRIM3-209ENST00000529529 INPP5BP32019 993 aa19.98■□□□□ 0.79
TRIM3-209ENST00000529529 TAF1CQ15572 869 aaPredicted RBP19.98■□□□□ 0.79
TRIM3-209ENST00000529529 OTOP1Q7RTM1 612 aa19.98■□□□□ 0.79
TRIM3-209ENST00000529529 SLF2Q8IX21 1173 aa19.98■□□□□ 0.79
TRIM3-209ENST00000529529 PDS5AQ29RF7 1337 aaKnown RBP19.98■□□□□ 0.79
TRIM3-209ENST00000529529 PPATQ06203 517 aa19.97■□□□□ 0.79
TRIM3-209ENST00000529529 PPIL2Q13356 520 aa19.97■□□□□ 0.79
TRIM3-209ENST00000529529 SNAPC2Q13487 334 aa19.97■□□□□ 0.79
TRIM3-209ENST00000529529 ERICH6Q7L0X2 663 aa19.97■□□□□ 0.79
TRIM3-209ENST00000529529 ZNF112Q9UJU3 913 aa19.97■□□□□ 0.79
TRIM3-209ENST00000529529 OTOFQ9HC10 1997 aa19.97■□□□□ 0.79
TRIM3-209ENST00000529529 RGS3P49796 1198 aa19.96■□□□□ 0.79
TRIM3-209ENST00000529529 FAM163AQ96GL9 167 aaPredicted RBP19.96■□□□□ 0.79
TRIM3-209ENST00000529529 IDI2Q9BXS1 227 aa19.96■□□□□ 0.79
TRIM3-209ENST00000529529 EFCC1Q9HA90 598 aa19.96■□□□□ 0.79
TRIM3-209ENST00000529529 HMG20BQ9P0W2 317 aa19.96■□□□□ 0.79
TRIM3-209ENST00000529529 GAKO14976 1311 aa19.96■□□□□ 0.79
TRIM3-209ENST00000529529 ENTPD3O75355 529 aa19.95■□□□□ 0.78
TRIM3-209ENST00000529529 WDHD1O75717 1129 aaPredicted RBP19.95■□□□□ 0.78
TRIM3-209ENST00000529529 ATP8B2P98198 1209 aa19.95■□□□□ 0.78
TRIM3-209ENST00000529529 MECOMQ03112 1051 aa19.95■□□□□ 0.78
TRIM3-209ENST00000529529 SPATA5Q8NB90 893 aa19.95■□□□□ 0.78
TRIM3-209ENST00000529529 PTPN22Q9Y2R2 807 aa19.95■□□□□ 0.78
TRIM3-209ENST00000529529 MYH13Q9UKX3 1938 aa19.95■□□□□ 0.78
TRIM3-209ENST00000529529 BTBD19C9JJ37 291 aa19.94■□□□□ 0.78
TRIM3-209ENST00000529529 BTDP43251 543 aa19.94■□□□□ 0.78
TRIM3-209ENST00000529529 PI16Q6UXB8 463 aa19.94■□□□□ 0.78
TRIM3-209ENST00000529529 TBC1D9Q6ZT07 1266 aa19.94■□□□□ 0.78
TRIM3-209ENST00000529529 ZSCAN29Q8IWY8 852 aaPredicted RBP19.94■□□□□ 0.78
TRIM3-209ENST00000529529 FTSJ3Q8IY81 847 aaKnown RBP19.94■□□□□ 0.78
TRIM3-209ENST00000529529 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.94■□□□□ 0.78
TRIM3-209ENST00000529529 OS9Q13438 667 aaPredicted RBP19.93■□□□□ 0.78
TRIM3-209ENST00000529529 POLA2Q14181 598 aa19.93■□□□□ 0.78
TRIM3-209ENST00000529529 SSH3Q8TE77 659 aa19.93■□□□□ 0.78
TRIM3-209ENST00000529529 C1orf115Q9H7X2 142 aa19.93■□□□□ 0.78
TRIM3-209ENST00000529529 LAMB1P07942 1786 aa19.93■□□□□ 0.78
TRIM3-209ENST00000529529 GPR75-ASB3A0A0A6YYF3 556 aa19.92■□□□□ 0.78
TRIM3-209ENST00000529529 ZBTB7BO15156 539 aaPredicted RBP19.92■□□□□ 0.78
TRIM3-209ENST00000529529 SURF6O75683 361 aaKnown RBP19.92■□□□□ 0.78
TRIM3-209ENST00000529529 LDHCP07864 332 aa19.92■□□□□ 0.78
TRIM3-209ENST00000529529 CAP1Q01518 475 aa19.92■□□□□ 0.78
TRIM3-209ENST00000529529 PICALMQ13492 652 aa19.92■□□□□ 0.78
TRIM3-209ENST00000529529 ARHGEF6Q15052 776 aa19.92■□□□□ 0.78
TRIM3-209ENST00000529529 SH3BP5LQ7L8J4 393 aa19.92■□□□□ 0.78
TRIM3-209ENST00000529529 ITPRIPQ8IWB1 547 aa19.92■□□□□ 0.78
TRIM3-209ENST00000529529 ZCCHC17Q9NP64 241 aaKnown RBP19.92■□□□□ 0.78
TRIM3-209ENST00000529529 RAI14Q9P0K7 980 aa19.92■□□□□ 0.78
TRIM3-209ENST00000529529 MROH7-TTC4A0A0A0MT08 1334 aa19.92■□□□□ 0.78
TRIM3-209ENST00000529529 UQCRFS1P1P0C7P4 283 aa19.91■□□□□ 0.78
TRIM3-209ENST00000529529 ARID4AP29374 1257 aaPredicted RBP19.91■□□□□ 0.78
TRIM3-209ENST00000529529 GSTO1P78417 241 aa19.91■□□□□ 0.78
TRIM3-209ENST00000529529 NOL9Q5SY16 702 aaKnown RBP19.91■□□□□ 0.78
TRIM3-209ENST00000529529 ZNF384Q8TF68 577 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms