RNA–Protein interactions for RNA: ENST00000529224.1

SSH3-206, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-206ENST00000529224 USP2O75604 605 aaPredicted RBP16.11■□□□□ 0.17
SSH3-206ENST00000529224 CACNB3P54284 484 aa16.11■□□□□ 0.17
SSH3-206ENST00000529224 DIXDC1Q155Q3 683 aa16.11■□□□□ 0.17
SSH3-206ENST00000529224 CEP85Q6P2H3 762 aa16.11■□□□□ 0.17
SSH3-206ENST00000529224 SLF2Q8IX21 1173 aa16.11■□□□□ 0.17
SSH3-206ENST00000529224 ZNF296Q8WUU4 475 aaPredicted RBP16.11■□□□□ 0.17
SSH3-206ENST00000529224 HOOK2Q96ED9 719 aa16.11■□□□□ 0.17
SSH3-206ENST00000529224 R3HDMLQ9H3Y0 253 aa16.11■□□□□ 0.17
SSH3-206ENST00000529224 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.11■□□□□ 0.17
SSH3-206ENST00000529224 ABCF2Q9UG63 623 aa16.11■□□□□ 0.17
SSH3-206ENST00000529224 DDX19BQ9UMR2 479 aa16.11■□□□□ 0.17
SSH3-206ENST00000529224 DOCK2Q92608 1830 aa16.1■□□□□ 0.17
SSH3-206ENST00000529224 UQCRFS1P1P0C7P4 283 aa16.1■□□□□ 0.17
SSH3-206ENST00000529224 ARID4AP29374 1257 aaPredicted RBP16.1■□□□□ 0.17
SSH3-206ENST00000529224 SOX10P56693 466 aa16.1■□□□□ 0.17
SSH3-206ENST00000529224 SREBF2Q12772 1141 aa16.1■□□□□ 0.17
SSH3-206ENST00000529224 TNNI3KQ59H18 835 aa16.1■□□□□ 0.17
SSH3-206ENST00000529224 CTU1Q7Z7A3 348 aaKnown RBP16.1■□□□□ 0.17
SSH3-206ENST00000529224 DZIP1Q86YF9 867 aaKnown RBP16.1■□□□□ 0.17
SSH3-206ENST00000529224 ANKRD13AQ8IZ07 590 aa16.1■□□□□ 0.17
SSH3-206ENST00000529224 CHMP4BQ9H444 224 aaKnown RBP16.1■□□□□ 0.17
SSH3-206ENST00000529224 FPGT-TNNI3KV9GXZ4 949 aa16.1■□□□□ 0.17
SSH3-206ENST00000529224 RPAP1Q9BWH6 1393 aaPredicted RBP16.1■□□□□ 0.17
SSH3-206ENST00000529224 TNRC18O15417 2968 aaPredicted RBP16.09■□□□□ 0.17
SSH3-206ENST00000529224 CDC42EP5Q6NZY7 148 aa16.09■□□□□ 0.17
SSH3-206ENST00000529224 ERICH6Q7L0X2 663 aa16.09■□□□□ 0.17
SSH3-206ENST00000529224 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.09■□□□□ 0.17
SSH3-206ENST00000529224 WNK4Q96J92 1243 aa16.09■□□□□ 0.17
SSH3-206ENST00000529224 HMG20BQ9P0W2 317 aa16.09■□□□□ 0.17
SSH3-206ENST00000529224 COG6Q9Y2V7 657 aa16.09■□□□□ 0.17
SSH3-206ENST00000529224 GPR25O00155 361 aa16.08■□□□□ 0.16
SSH3-206ENST00000529224 ZBTB48P10074 688 aaPredicted RBP16.08■□□□□ 0.16
SSH3-206ENST00000529224 GJA5P36382 358 aa16.08■□□□□ 0.16
SSH3-206ENST00000529224 SPATA5Q8NB90 893 aa16.08■□□□□ 0.16
SSH3-206ENST00000529224 CFHR5Q9BXR6 569 aa16.08■□□□□ 0.16
SSH3-206ENST00000529224 USP40Q9NVE5 1235 aa16.08■□□□□ 0.16
SSH3-206ENST00000529224 GAKO14976 1311 aa16.08■□□□□ 0.16
SSH3-206ENST00000529224 MAST2Q6P0Q8 1798 aa16.08■□□□□ 0.16
SSH3-206ENST00000529224 MANSC4A6NHS7 340 aaPredicted RBP16.07■□□□□ 0.16
SSH3-206ENST00000529224 SLC34A2O95436 690 aa16.07■□□□□ 0.16
SSH3-206ENST00000529224 INHBEP58166 350 aa16.07■□□□□ 0.16
SSH3-206ENST00000529224 HSP90AB4PQ58FF6 505 aa16.07■□□□□ 0.16
SSH3-206ENST00000529224 NOM1Q5C9Z4 860 aaKnown RBP16.07■□□□□ 0.16
SSH3-206ENST00000529224 CCDC158Q5M9N0 1113 aa16.07■□□□□ 0.16
SSH3-206ENST00000529224 TTC39AQ5SRH9 613 aa16.07■□□□□ 0.16
SSH3-206ENST00000529224 DCAF15Q66K64 600 aa16.07■□□□□ 0.16
SSH3-206ENST00000529224 ERC1Q8IUD2 1116 aa16.07■□□□□ 0.16
SSH3-206ENST00000529224 FAM151AQ8WW52 585 aa16.07■□□□□ 0.16
SSH3-206ENST00000529224 FAM163AQ96GL9 167 aaPredicted RBP16.07■□□□□ 0.16
SSH3-206ENST00000529224 CDK5RAP2Q96SN8 1893 aa16.06■□□□□ 0.16
SSH3-206ENST00000529224 IGF2BP3O00425 579 aaKnown RBP eCLIP16.06■□□□□ 0.16
SSH3-206ENST00000529224 MCAMP43121 646 aa16.06■□□□□ 0.16
SSH3-206ENST00000529224 GSTO1P78417 241 aa16.06■□□□□ 0.16
SSH3-206ENST00000529224 MAP3K9P80192 1104 aa16.06■□□□□ 0.16
SSH3-206ENST00000529224 PDE3AQ14432 1141 aa16.06■□□□□ 0.16
SSH3-206ENST00000529224 PI16Q6UXB8 463 aa16.06■□□□□ 0.16
SSH3-206ENST00000529224 IFNL1Q8IU54 200 aa16.06■□□□□ 0.16
SSH3-206ENST00000529224 DBNDD2Q9BQY9 259 aa16.06■□□□□ 0.16
SSH3-206ENST00000529224 ZBTB40Q9NUA8 1239 aa16.06■□□□□ 0.16
SSH3-206ENST00000529224 CSADQ9Y600 493 aa16.06■□□□□ 0.16
SSH3-206ENST00000529224 MROH7-TTC4A0A0A0MT08 1334 aa16.05■□□□□ 0.16
SSH3-206ENST00000529224 HMMRO75330 724 aa16.05■□□□□ 0.16
SSH3-206ENST00000529224 LDHCP07864 332 aa16.05■□□□□ 0.16
SSH3-206ENST00000529224 MECOMQ03112 1051 aa16.05■□□□□ 0.16
SSH3-206ENST00000529224 TCP10Q12799 353 aa16.05■□□□□ 0.16
SSH3-206ENST00000529224 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.05■□□□□ 0.16
SSH3-206ENST00000529224 RPAP2Q8IXW5 612 aaPredicted RBP16.05■□□□□ 0.16
SSH3-206ENST00000529224 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.05■□□□□ 0.16
SSH3-206ENST00000529224 ELP3Q9H9T3 547 aa16.05■□□□□ 0.16
SSH3-206ENST00000529224 HPS5Q9UPZ3 1129 aa16.05■□□□□ 0.16
SSH3-206ENST00000529224 EXOC6BQ9Y2D4 811 aa16.05■□□□□ 0.16
SSH3-206ENST00000529224 FOCADQ5VW36 1801 aa16.04■□□□□ 0.16
SSH3-206ENST00000529224 ALDH1A1P00352 501 aa16.04■□□□□ 0.16
SSH3-206ENST00000529224 NFIAQ12857 509 aa16.04■□□□□ 0.16
SSH3-206ENST00000529224 VGLL4Q14135 290 aa16.04■□□□□ 0.16
SSH3-206ENST00000529224 TBC1D9Q6ZT07 1266 aa16.04■□□□□ 0.16
SSH3-206ENST00000529224 OPTNQ96CV9 577 aa16.04■□□□□ 0.16
SSH3-206ENST00000529224 ZNF512BQ96KM6 892 aaPredicted RBP16.04■□□□□ 0.16
SSH3-206ENST00000529224 WRNIP1Q96S55 665 aa16.04■□□□□ 0.16
SSH3-206ENST00000529224 IDI2Q9BXS1 227 aa16.04■□□□□ 0.16
SSH3-206ENST00000529224 RAI14Q9P0K7 980 aa16.04■□□□□ 0.16
SSH3-206ENST00000529224 LRP2BPQ9P2M1 347 aa16.04■□□□□ 0.16
SSH3-206ENST00000529224 FAM198AQ9UFP1 575 aa16.04■□□□□ 0.16
SSH3-206ENST00000529224 HTTP42858 3142 aa16.04■□□□□ 0.16
SSH3-206ENST00000529224 FKTNO75072 461 aa16.03■□□□□ 0.16
SSH3-206ENST00000529224 BTDP43251 543 aa16.03■□□□□ 0.16
SSH3-206ENST00000529224 CNKSR2Q8WXI2 1034 aa16.03■□□□□ 0.16
SSH3-206ENST00000529224 NSUN4Q96CB9 384 aaKnown RBP16.03■□□□□ 0.16
SSH3-206ENST00000529224 EAF2Q96CJ1 260 aaPredicted RBP16.03■□□□□ 0.16
SSH3-206ENST00000529224 PTPN18Q99952 460 aa16.03■□□□□ 0.16
SSH3-206ENST00000529224 ZNF341Q9BYN7 854 aa16.03■□□□□ 0.16
SSH3-206ENST00000529224 DBNLQ9UJU6 430 aaKnown RBP16.03■□□□□ 0.16
SSH3-206ENST00000529224 RFX7Q2KHR2 1363 aa16.02■□□□□ 0.16
SSH3-206ENST00000529224 GPR75-ASB3A0A0A6YYF3 556 aa16.02■□□□□ 0.16
SSH3-206ENST00000529224 ENTPD3O75355 529 aa16.02■□□□□ 0.16
SSH3-206ENST00000529224 MAP4K4O95819 1239 aaPredicted RBP16.02■□□□□ 0.16
SSH3-206ENST00000529224 RGS3P49796 1198 aa16.02■□□□□ 0.16
SSH3-206ENST00000529224 PKN2Q16513 984 aaKnown RBP16.02■□□□□ 0.16
SSH3-206ENST00000529224 OTUD7BQ6GQQ9 843 aa16.02■□□□□ 0.16
SSH3-206ENST00000529224 ZNF384Q8TF68 577 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms