RNA–Protein interactions for RNA: ENST00000529205.1

HIF3A-212, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-212ENST00000529205 CPA4Q9UI42 421 aa16.96■□□□□ 0.31
HIF3A-212ENST00000529205 RPAP1Q9BWH6 1393 aaPredicted RBP16.95■□□□□ 0.3
HIF3A-212ENST00000529205 PDHXO00330 501 aa16.95■□□□□ 0.3
HIF3A-212ENST00000529205 NBPF7P0C2Y1 421 aaPredicted RBP16.95■□□□□ 0.3
HIF3A-212ENST00000529205 APOBEC3HQ6NTF7 200 aaKnown RBP16.95■□□□□ 0.3
HIF3A-212ENST00000529205 FAM151AQ8WW52 585 aa16.95■□□□□ 0.3
HIF3A-212ENST00000529205 BICC1Q9H694 974 aaKnown RBP16.95■□□□□ 0.3
HIF3A-212ENST00000529205 BCAMP50895 628 aa16.94■□□□□ 0.3
HIF3A-212ENST00000529205 LRRC24Q50LG9 513 aa16.94■□□□□ 0.3
HIF3A-212ENST00000529205 WDR66Q8TBY9 1149 aa16.94■□□□□ 0.3
HIF3A-212ENST00000529205 MRS2Q9HD23 443 aa16.94■□□□□ 0.3
HIF3A-212ENST00000529205 NR2E3Q9Y5X4 410 aa16.94■□□□□ 0.3
HIF3A-212ENST00000529205 UTYO14607 1347 aa16.94■□□□□ 0.3
HIF3A-212ENST00000529205 MYPNQ86TC9 1320 aa16.94■□□□□ 0.3
HIF3A-212ENST00000529205 KIF16BQ96L93 1317 aa16.94■□□□□ 0.3
HIF3A-212ENST00000529205 KIAA0100Q14667 2235 aaKnown RBP16.93■□□□□ 0.3
HIF3A-212ENST00000529205 HTTP42858 3142 aa16.93■□□□□ 0.3
HIF3A-212ENST00000529205 GJB1P08034 283 aa16.93■□□□□ 0.3
HIF3A-212ENST00000529205 OSBPP22059 807 aa16.93■□□□□ 0.3
HIF3A-212ENST00000529205 GJA8P48165 433 aa16.93■□□□□ 0.3
HIF3A-212ENST00000529205 FCGRTP55899 365 aa16.93■□□□□ 0.3
HIF3A-212ENST00000529205 MTFR1Q15390 333 aa16.93■□□□□ 0.3
HIF3A-212ENST00000529205 PUM3Q15397 648 aaKnown RBP16.93■□□□□ 0.3
HIF3A-212ENST00000529205 RABL6Q3YEC7 729 aaPredicted RBP16.93■□□□□ 0.3
HIF3A-212ENST00000529205 KAZALD1Q96I82 304 aa16.93■□□□□ 0.3
HIF3A-212ENST00000529205 PARK7Q99497 189 aaKnown RBP16.93■□□□□ 0.3
HIF3A-212ENST00000529205 RNF208Q9H0X6 261 aa16.93■□□□□ 0.3
HIF3A-212ENST00000529205 CCL5P13501 91 aa16.92■□□□□ 0.3
HIF3A-212ENST00000529205 INPP5BP32019 993 aa16.92■□□□□ 0.3
HIF3A-212ENST00000529205 KCNH4Q9UQ05 1017 aa16.92■□□□□ 0.3
HIF3A-212ENST00000529205 SLC5A1P13866 664 aa16.91■□□□□ 0.3
HIF3A-212ENST00000529205 CAPN2P17655 700 aa16.91■□□□□ 0.3
HIF3A-212ENST00000529205 VGLL2Q8N8G2 317 aa16.91■□□□□ 0.3
HIF3A-212ENST00000529205 ZNF112Q9UJU3 913 aa16.91■□□□□ 0.3
HIF3A-212ENST00000529205 MKI67P46013 3256 aaKnown RBP16.9■□□□□ 0.3
HIF3A-212ENST00000529205 CXCL11O14625 94 aa16.9■□□□□ 0.3
HIF3A-212ENST00000529205 TCP10Q12799 353 aa16.9■□□□□ 0.3
HIF3A-212ENST00000529205 NOL9Q5SY16 702 aaKnown RBP16.9■□□□□ 0.3
HIF3A-212ENST00000529205 FASTKD5Q7L8L6 764 aaKnown RBP16.9■□□□□ 0.3
HIF3A-212ENST00000529205 SLAIN1Q8ND83 568 aa16.9■□□□□ 0.3
HIF3A-212ENST00000529205 SHISA4Q96DD7 197 aa16.9■□□□□ 0.3
HIF3A-212ENST00000529205 RBM27Q9P2N5 1060 aaKnown RBP16.9■□□□□ 0.3
HIF3A-212ENST00000529205 CTGFP29279 349 aa16.89■□□□□ 0.29
HIF3A-212ENST00000529205 LPIN2Q92539 896 aa16.89■□□□□ 0.29
HIF3A-212ENST00000529205 GNL3LQ9NVN8 582 aaKnown RBP16.89■□□□□ 0.29
HIF3A-212ENST00000529205 CENPFP49454 3210 aa16.89■□□□□ 0.29
HIF3A-212ENST00000529205 FGFR2P21802 821 aa16.88■□□□□ 0.29
HIF3A-212ENST00000529205 CDC42EP5Q6NZY7 148 aa16.88■□□□□ 0.29
HIF3A-212ENST00000529205 ANKRD44Q8N8A2 993 aa16.88■□□□□ 0.29
HIF3A-212ENST00000529205 SPINK5Q9NQ38 1064 aaPredicted RBP16.88■□□□□ 0.29
HIF3A-212ENST00000529205 PICK1Q9NRD5 415 aa16.88■□□□□ 0.29
HIF3A-212ENST00000529205 USP40Q9NVE5 1235 aa16.88■□□□□ 0.29
HIF3A-212ENST00000529205 LDHBP07195 334 aaKnown RBP16.87■□□□□ 0.29
HIF3A-212ENST00000529205 PRKCZQ05513 592 aa16.87■□□□□ 0.29
HIF3A-212ENST00000529205 KLHDC4Q8TBB5 520 aa16.87■□□□□ 0.29
HIF3A-212ENST00000529205 U2AF1L4Q8WU68 220 aaKnown RBP16.87■□□□□ 0.29
HIF3A-212ENST00000529205 DAGLAQ9Y4D2 1042 aa16.87■□□□□ 0.29
HIF3A-212ENST00000529205 ADGRA2Q96PE1 1338 aa16.87■□□□□ 0.29
HIF3A-212ENST00000529205 ZSWIM8A7E2V4 1837 aa16.86■□□□□ 0.29
HIF3A-212ENST00000529205 EYA2O00167 538 aa16.86■□□□□ 0.29
HIF3A-212ENST00000529205 ANP32CO43423 234 aa16.86■□□□□ 0.29
HIF3A-212ENST00000529205 EVI5O60447 810 aa16.86■□□□□ 0.29
HIF3A-212ENST00000529205 FARP2O94887 1054 aaPredicted RBP16.86■□□□□ 0.29
HIF3A-212ENST00000529205 SGPL1O95470 568 aa16.86■□□□□ 0.29
HIF3A-212ENST00000529205 CYP2C8P10632 490 aa16.86■□□□□ 0.29
HIF3A-212ENST00000529205 BCRP11274 1271 aa16.86■□□□□ 0.29
HIF3A-212ENST00000529205 PTPRCP08575 1304 aa16.86■□□□□ 0.29
HIF3A-212ENST00000529205 A0A1W2PPC1 479 aa16.85■□□□□ 0.29
HIF3A-212ENST00000529205 ADCY3O60266 1144 aa16.85■□□□□ 0.29
HIF3A-212ENST00000529205 TFRCP02786 760 aaKnown RBP16.85■□□□□ 0.29
HIF3A-212ENST00000529205 DIXDC1Q155Q3 683 aa16.85■□□□□ 0.29
HIF3A-212ENST00000529205 UBE2Q1Q7Z7E8 422 aa16.85■□□□□ 0.29
HIF3A-212ENST00000529205 ZSCAN29Q8IWY8 852 aaPredicted RBP16.85■□□□□ 0.29
HIF3A-212ENST00000529205 SCYL3Q8IZE3 742 aa16.85■□□□□ 0.29
HIF3A-212ENST00000529205 ZGPATQ8N5A5 531 aaKnown RBP16.85■□□□□ 0.29
HIF3A-212ENST00000529205 PXYLP1Q8TE99 480 aa16.85■□□□□ 0.29
HIF3A-212ENST00000529205 SMCR8Q8TEV9 937 aaPredicted RBP16.85■□□□□ 0.29
HIF3A-212ENST00000529205 SLC45A1Q9Y2W3 748 aa16.85■□□□□ 0.29
HIF3A-212ENST00000529205 LRRFIP2Q9Y608 721 aaKnown RBP16.85■□□□□ 0.29
HIF3A-212ENST00000529205 ZHX2Q9Y6X8 837 aa16.85■□□□□ 0.29
HIF3A-212ENST00000529205 BRCA2P51587 3418 aa16.85■□□□□ 0.29
HIF3A-212ENST00000529205 TNPO2O14787 897 aaKnown RBP16.84■□□□□ 0.29
HIF3A-212ENST00000529205 NFIAQ12857 509 aa16.84■□□□□ 0.29
HIF3A-212ENST00000529205 MOGSQ13724 837 aa16.84■□□□□ 0.29
HIF3A-212ENST00000529205 GPAT2Q6NUI2 795 aa16.84■□□□□ 0.29
HIF3A-212ENST00000529205 GADL1Q6ZQY3 521 aa16.84■□□□□ 0.29
HIF3A-212ENST00000529205 SLF2Q8IX21 1173 aa16.84■□□□□ 0.29
HIF3A-212ENST00000529205 UNC93B1Q9H1C4 597 aa16.84■□□□□ 0.29
HIF3A-212ENST00000529205 DENND2AQ9ULE3 1009 aa16.84■□□□□ 0.29
HIF3A-212ENST00000529205 GABRQQ9UN88 632 aa16.84■□□□□ 0.29
HIF3A-212ENST00000529205 A0A0G2JLL6 359 aaPredicted RBP16.83■□□□□ 0.28
HIF3A-212ENST00000529205 SEMA3EO15041 775 aa16.83■□□□□ 0.28
HIF3A-212ENST00000529205 ENTPD3O75355 529 aa16.83■□□□□ 0.28
HIF3A-212ENST00000529205 PRDX5P30044 214 aa16.83■□□□□ 0.28
HIF3A-212ENST00000529205 FLT3LGP49771 235 aa16.83■□□□□ 0.28
HIF3A-212ENST00000529205 PRRT2Q7Z6L0 340 aaPredicted RBP16.83■□□□□ 0.28
HIF3A-212ENST00000529205 MRPL50Q8N5N7 158 aaKnown RBP16.83■□□□□ 0.28
HIF3A-212ENST00000529205 COA7Q96BR5 231 aa16.83■□□□□ 0.28
HIF3A-212ENST00000529205 CEP126Q9P2H0 1117 aa16.83■□□□□ 0.28
HIF3A-212ENST00000529205 FAM198AQ9UFP1 575 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms