RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 MOGSQ13724 837 aa24.03■■□□□ 1.44
SSRP1-204ENST00000529002 ANKRD23Q86SG2 305 aa24.03■■□□□ 1.44
SSRP1-204ENST00000529002 NKX2-3Q8TAU0 364 aa24.03■■□□□ 1.44
SSRP1-204ENST00000529002 LRCH3Q96II8 777 aa24.03■■□□□ 1.44
SSRP1-204ENST00000529002 UNC93B1Q9H1C4 597 aa24.03■■□□□ 1.44
SSRP1-204ENST00000529002 GABRQQ9UN88 632 aa24.03■■□□□ 1.44
SSRP1-204ENST00000529002 MYH13Q9UKX3 1938 aa24.02■■□□□ 1.44
SSRP1-204ENST00000529002 HOXD10P28358 340 aa24.02■■□□□ 1.44
SSRP1-204ENST00000529002 HDLBPQ00341 1268 aaKnown RBP24.02■■□□□ 1.44
SSRP1-204ENST00000529002 VPS37DQ86XT2 251 aa24.02■■□□□ 1.44
SSRP1-204ENST00000529002 U2AF1L4Q8WU68 220 aaKnown RBP24.02■■□□□ 1.44
SSRP1-204ENST00000529002 KAZALD1Q96I82 304 aa24.02■■□□□ 1.44
SSRP1-204ENST00000529002 SUCLG2Q96I99 432 aa24.02■■□□□ 1.44
SSRP1-204ENST00000529002 ZDHHC15Q96MV8 337 aa24.02■■□□□ 1.44
SSRP1-204ENST00000529002 ZNF341Q9BYN7 854 aa24.02■■□□□ 1.44
SSRP1-204ENST00000529002 TMOD2Q9NZR1 351 aa24.02■■□□□ 1.44
SSRP1-204ENST00000529002 COL6A3P12111 3177 aa24.01■■□□□ 1.43
SSRP1-204ENST00000529002 FRAT2O75474 233 aaPredicted RBP24.01■■□□□ 1.43
SSRP1-204ENST00000529002 FARP2O94887 1054 aaPredicted RBP24.01■■□□□ 1.43
SSRP1-204ENST00000529002 EXOSC9Q06265 439 aaKnown RBP24.01■■□□□ 1.43
SSRP1-204ENST00000529002 CCDC27Q2M243 656 aa24.01■■□□□ 1.43
SSRP1-204ENST00000529002 LRRC24Q50LG9 513 aa24.01■■□□□ 1.43
SSRP1-204ENST00000529002 FAM83AQ86UY5 434 aa24.01■■□□□ 1.43
SSRP1-204ENST00000529002 C9orf78Q9NZ63 289 aaPredicted RBP24.01■■□□□ 1.43
SSRP1-204ENST00000529002 CYP2C8P10632 490 aa24■■□□□ 1.43
SSRP1-204ENST00000529002 BCAMP50895 628 aa24■■□□□ 1.43
SSRP1-204ENST00000529002 DCAF15Q66K64 600 aa24■■□□□ 1.43
SSRP1-204ENST00000529002 NR2E3Q9Y5X4 410 aa24■■□□□ 1.43
SSRP1-204ENST00000529002 KCNH4Q9UQ05 1017 aa23.99■■□□□ 1.43
SSRP1-204ENST00000529002 BCRP11274 1271 aa23.98■■□□□ 1.43
SSRP1-204ENST00000529002 UBXN2AP68543 259 aa23.98■■□□□ 1.43
SSRP1-204ENST00000529002 TCP10Q12799 353 aa23.98■■□□□ 1.43
SSRP1-204ENST00000529002 TBC1D22AQ8WUA7 517 aa23.98■■□□□ 1.43
SSRP1-204ENST00000529002 STAP2Q9UGK3 403 aa23.98■■□□□ 1.43
SSRP1-204ENST00000529002 SALL2Q9Y467 1007 aaPredicted RBP23.98■■□□□ 1.43
SSRP1-204ENST00000529002 ELNP15502 786 aa23.97■■□□□ 1.43
SSRP1-204ENST00000529002 IL16Q14005 1332 aa23.97■■□□□ 1.43
SSRP1-204ENST00000529002 FKBP1CQ5VVH2 108 aa23.97■■□□□ 1.43
SSRP1-204ENST00000529002 GPAT2Q6NUI2 795 aa23.97■■□□□ 1.43
SSRP1-204ENST00000529002 SLC4A10Q6U841 1118 aa23.97■■□□□ 1.43
SSRP1-204ENST00000529002 RPAP1Q9BWH6 1393 aaPredicted RBP23.97■■□□□ 1.43
SSRP1-204ENST00000529002 LAMA3Q16787 3333 aa23.97■■□□□ 1.43
SSRP1-204ENST00000529002 MROH5Q6ZUA9 1318 aa23.96■■□□□ 1.43
SSRP1-204ENST00000529002 SGPL1O95470 568 aa23.96■■□□□ 1.43
SSRP1-204ENST00000529002 NBPF7P0C2Y1 421 aaPredicted RBP23.96■■□□□ 1.43
SSRP1-204ENST00000529002 HOOK2Q96ED9 719 aa23.96■■□□□ 1.43
SSRP1-204ENST00000529002 ZNF112Q9UJU3 913 aa23.96■■□□□ 1.43
SSRP1-204ENST00000529002 PTPRFP10586 1907 aa23.96■■□□□ 1.43
SSRP1-204ENST00000529002 FCGRTP55899 365 aa23.95■■□□□ 1.42
SSRP1-204ENST00000529002 NFIAQ12857 509 aa23.95■■□□□ 1.42
SSRP1-204ENST00000529002 CAVIN4Q5BKX8 364 aa23.95■■□□□ 1.42
SSRP1-204ENST00000529002 METTL24Q5JXM2 366 aa23.95■■□□□ 1.42
SSRP1-204ENST00000529002 VGLL2Q8N8G2 317 aa23.95■■□□□ 1.42
SSRP1-204ENST00000529002 KLHDC4Q8TBB5 520 aa23.95■■□□□ 1.42
SSRP1-204ENST00000529002 ADCY3O60266 1144 aa23.94■■□□□ 1.42
SSRP1-204ENST00000529002 EVI5O60447 810 aa23.94■■□□□ 1.42
SSRP1-204ENST00000529002 HHIPL2Q6UWX4 724 aa23.94■■□□□ 1.42
SSRP1-204ENST00000529002 SLAIN1Q8ND83 568 aa23.94■■□□□ 1.42
SSRP1-204ENST00000529002 MRIQ9BWK5 157 aa23.94■■□□□ 1.42
SSRP1-204ENST00000529002 SPINK5Q9NQ38 1064 aaPredicted RBP23.94■■□□□ 1.42
SSRP1-204ENST00000529002 CUL9Q8IWT3 2517 aa23.93■■□□□ 1.42
SSRP1-204ENST00000529002 FLT3LGP49771 235 aa23.93■■□□□ 1.42
SSRP1-204ENST00000529002 DIXDC1Q155Q3 683 aa23.93■■□□□ 1.42
SSRP1-204ENST00000529002 FAM151AQ8WW52 585 aa23.93■■□□□ 1.42
SSRP1-204ENST00000529002 DEFB118Q96PH6 123 aa23.93■■□□□ 1.42
SSRP1-204ENST00000529002 PARK7Q99497 189 aaKnown RBP23.93■■□□□ 1.42
SSRP1-204ENST00000529002 BICC1Q9H694 974 aaKnown RBP23.93■■□□□ 1.42
SSRP1-204ENST00000529002 ALDH1L1O75891 902 aa23.92■■□□□ 1.42
SSRP1-204ENST00000529002 TFRCP02786 760 aaKnown RBP23.92■■□□□ 1.42
SSRP1-204ENST00000529002 INHAP05111 366 aa23.92■■□□□ 1.42
SSRP1-204ENST00000529002 CDC42EP5Q6NZY7 148 aa23.92■■□□□ 1.42
SSRP1-204ENST00000529002 ZFPM1Q8IX07 1006 aa23.92■■□□□ 1.42
SSRP1-204ENST00000529002 SRCIN1Q9C0H9 1055 aa23.92■■□□□ 1.42
SSRP1-204ENST00000529002 DOCK2Q92608 1830 aa23.91■■□□□ 1.42
SSRP1-204ENST00000529002 PDE8BO95263 885 aa23.91■■□□□ 1.42
SSRP1-204ENST00000529002 SLURP2P0DP57 97 aa23.91■■□□□ 1.42
SSRP1-204ENST00000529002 ANKRD44Q8N8A2 993 aa23.91■■□□□ 1.42
SSRP1-204ENST00000529002 DIS3LQ8TF46 1054 aaKnown RBP23.91■■□□□ 1.42
SSRP1-204ENST00000529002 DAGLAQ9Y4D2 1042 aa23.91■■□□□ 1.42
SSRP1-204ENST00000529002 PHIPQ8WWQ0 1821 aa23.91■■□□□ 1.42
SSRP1-204ENST00000529002 MAST3O60307 1309 aa23.9■■□□□ 1.42
SSRP1-204ENST00000529002 NOL9Q5SY16 702 aaKnown RBP23.9■■□□□ 1.42
SSRP1-204ENST00000529002 FAM198AQ9UFP1 575 aa23.9■■□□□ 1.42
SSRP1-204ENST00000529002 PAWRQ96IZ0 340 aaKnown RBP23.89■■□□□ 1.41
SSRP1-204ENST00000529002 TAOK2Q9UL54 1235 aa23.89■■□□□ 1.41
SSRP1-204ENST00000529002 A0A0C4DFX4 3053 aa23.89■■□□□ 1.41
SSRP1-204ENST00000529002 A0A1W2PPC1 479 aa23.88■■□□□ 1.41
SSRP1-204ENST00000529002 GADL1Q6ZQY3 521 aa23.88■■□□□ 1.41
SSRP1-204ENST00000529002 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.88■■□□□ 1.41
SSRP1-204ENST00000529002 SUGT1Q9Y2Z0 365 aa23.88■■□□□ 1.41
SSRP1-204ENST00000529002 ZHX2Q9Y6X8 837 aa23.88■■□□□ 1.41
SSRP1-204ENST00000529002 MYH2Q9UKX2 1941 aa23.88■■□□□ 1.41
SSRP1-204ENST00000529002 CXCL11O14625 94 aa23.87■■□□□ 1.41
SSRP1-204ENST00000529002 FGFR2P21802 821 aa23.87■■□□□ 1.41
SSRP1-204ENST00000529002 RABL6Q3YEC7 729 aaPredicted RBP23.87■■□□□ 1.41
SSRP1-204ENST00000529002 Q7L0L9 218 aa23.87■■□□□ 1.41
SSRP1-204ENST00000529002 ZMYND8Q9ULU4 1186 aaPredicted RBP23.87■■□□□ 1.41
SSRP1-204ENST00000529002 TNPO2O14787 897 aaKnown RBP23.86■■□□□ 1.41
SSRP1-204ENST00000529002 PRDX5P30044 214 aa23.86■■□□□ 1.41
SSRP1-204ENST00000529002 A0A0G2JLL6 359 aaPredicted RBP23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms