RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 COL4A5P29400 1685 aa9.51□□□□□ -0.89
SSBP3-211ENST00000528787 ZNF532Q9HCE3 1301 aa9.51□□□□□ -0.89
SSBP3-211ENST00000528787 NF2P35240 595 aa9.5□□□□□ -0.89
SSBP3-211ENST00000528787 BTDP43251 543 aa9.5□□□□□ -0.89
SSBP3-211ENST00000528787 USP5P45974 858 aa9.5□□□□□ -0.89
SSBP3-211ENST00000528787 SCNN1DP51172 638 aa9.5□□□□□ -0.89
SSBP3-211ENST00000528787 PRELPP51888 382 aa9.5□□□□□ -0.89
SSBP3-211ENST00000528787 ZMYM1Q5SVZ6 1142 aa9.5□□□□□ -0.89
SSBP3-211ENST00000528787 TSHZ3Q63HK5 1081 aa9.5□□□□□ -0.89
SSBP3-211ENST00000528787 PI16Q6UXB8 463 aa9.5□□□□□ -0.89
SSBP3-211ENST00000528787 FAM83AQ86UY5 434 aa9.5□□□□□ -0.89
SSBP3-211ENST00000528787 SULF1Q8IWU6 871 aa9.5□□□□□ -0.89
SSBP3-211ENST00000528787 CERS5Q8N5B7 392 aa9.5□□□□□ -0.89
SSBP3-211ENST00000528787 ANTXR1Q9H6X2 564 aa9.5□□□□□ -0.89
SSBP3-211ENST00000528787 JAG2Q9Y219 1238 aa9.5□□□□□ -0.89
SSBP3-211ENST00000528787 ZBTB12Q9Y330 459 aaPredicted RBP9.5□□□□□ -0.89
SSBP3-211ENST00000528787 MYO5AQ9Y4I1 1855 aaKnown RBP9.5□□□□□ -0.89
SSBP3-211ENST00000528787 ENTPD3O75355 529 aa9.49□□□□□ -0.89
SSBP3-211ENST00000528787 HLA-DOAP06340 250 aa9.49□□□□□ -0.89
SSBP3-211ENST00000528787 PCP11498 1178 aaKnown RBP9.49□□□□□ -0.89
SSBP3-211ENST00000528787 MCCP23508 829 aa9.49□□□□□ -0.89
SSBP3-211ENST00000528787 YY1P25490 414 aa9.49□□□□□ -0.89
SSBP3-211ENST00000528787 SUPT20HL1Q3ZLR7 823 aa9.49□□□□□ -0.89
SSBP3-211ENST00000528787 RNF20Q5VTR2 975 aa9.49□□□□□ -0.89
SSBP3-211ENST00000528787 TTC6Q86TZ1 520 aa9.49□□□□□ -0.89
SSBP3-211ENST00000528787 SLC51AQ86UW1 340 aa9.49□□□□□ -0.89
SSBP3-211ENST00000528787 LDHDQ86WU2 507 aa9.49□□□□□ -0.89
SSBP3-211ENST00000528787 TEX11Q8IYF3 940 aa9.49□□□□□ -0.89
SSBP3-211ENST00000528787 IDI2Q9BXS1 227 aa9.49□□□□□ -0.89
SSBP3-211ENST00000528787 TAF1DQ9H5J8 278 aaPredicted RBP9.49□□□□□ -0.89
SSBP3-211ENST00000528787 KCNQ5Q9NR82 932 aa9.49□□□□□ -0.89
SSBP3-211ENST00000528787 USP40Q9NVE5 1235 aa9.49□□□□□ -0.89
SSBP3-211ENST00000528787 DAGLAQ9Y4D2 1042 aa9.49□□□□□ -0.89
SSBP3-211ENST00000528787 CCDC171Q6TFL3 1326 aa9.49□□□□□ -0.89
SSBP3-211ENST00000528787 COL2A1P02458 1487 aaPredicted RBP9.48□□□□□ -0.89
SSBP3-211ENST00000528787 FOCADQ5VW36 1801 aa9.48□□□□□ -0.89
SSBP3-211ENST00000528787 TCRBV5S4A2TA0A5A2 114 aa9.48□□□□□ -0.89
SSBP3-211ENST00000528787 PATL2C9JE40 543 aaKnown RBP9.48□□□□□ -0.89
SSBP3-211ENST00000528787 WNT10BO00744 389 aa9.48□□□□□ -0.89
SSBP3-211ENST00000528787 APPP05067 770 aa9.48□□□□□ -0.89
SSBP3-211ENST00000528787 GSPT1P15170 499 aaKnown RBP9.48□□□□□ -0.89
SSBP3-211ENST00000528787 CHMLP26374 656 aa9.48□□□□□ -0.89
SSBP3-211ENST00000528787 SPDYE2Q495Y8 402 aa9.48□□□□□ -0.89
SSBP3-211ENST00000528787 PPP4R3BQ5MIZ7 849 aa9.48□□□□□ -0.89
SSBP3-211ENST00000528787 CWC27Q6UX04 472 aaKnown RBP9.48□□□□□ -0.89
SSBP3-211ENST00000528787 CDC37L1Q7L3B6 337 aa9.48□□□□□ -0.89
SSBP3-211ENST00000528787 TRIM34Q9BYJ4 488 aa9.48□□□□□ -0.89
SSBP3-211ENST00000528787 AATFQ9NY61 560 aaKnown RBP eCLIP9.48□□□□□ -0.89
SSBP3-211ENST00000528787 ARPP21Q9UBL0 812 aaPredicted RBP9.48□□□□□ -0.89
SSBP3-211ENST00000528787 CLEC11AQ9Y240 323 aa9.48□□□□□ -0.89
SSBP3-211ENST00000528787 ZMYM6O95789 1325 aa9.48□□□□□ -0.89
SSBP3-211ENST00000528787 GPAA1O43292 621 aa9.47□□□□□ -0.89
SSBP3-211ENST00000528787 MBD4O95243 580 aa9.47□□□□□ -0.89
SSBP3-211ENST00000528787 DIXDC1Q155Q3 683 aa9.47□□□□□ -0.89
SSBP3-211ENST00000528787 TBC1D10BQ4KMP7 808 aaPredicted RBP9.47□□□□□ -0.89
SSBP3-211ENST00000528787 DCAF15Q66K64 600 aa9.47□□□□□ -0.89
SSBP3-211ENST00000528787 FAM151AQ8WW52 585 aa9.47□□□□□ -0.89
SSBP3-211ENST00000528787 DSCC1Q9BVC3 393 aa9.47□□□□□ -0.89
SSBP3-211ENST00000528787 PGAP2Q9UHJ9 254 aa9.47□□□□□ -0.89
SSBP3-211ENST00000528787 NDUFB9Q9Y6M9 179 aa9.47□□□□□ -0.89
SSBP3-211ENST00000528787 SLC4A4Q9Y6R1 1079 aa9.47□□□□□ -0.89
SSBP3-211ENST00000528787 U3KPZ7 1027 aaPredicted RBP9.47□□□□□ -0.89
SSBP3-211ENST00000528787 UNCXA6NJT0 531 aa9.46□□□□□ -0.9
SSBP3-211ENST00000528787 ZKSCAN1P17029 563 aaPredicted RBP9.46□□□□□ -0.9
SSBP3-211ENST00000528787 EPS15P42566 896 aa9.46□□□□□ -0.9
SSBP3-211ENST00000528787 TDO2P48775 406 aa9.46□□□□□ -0.9
SSBP3-211ENST00000528787 NMIQ13287 307 aaPredicted RBP9.46□□□□□ -0.9
SSBP3-211ENST00000528787 ALX1Q15699 326 aa9.46□□□□□ -0.9
SSBP3-211ENST00000528787 IMMTQ16891 758 aaKnown RBP9.46□□□□□ -0.9
SSBP3-211ENST00000528787 EAPPQ56P03 285 aaPredicted RBP9.46□□□□□ -0.9
SSBP3-211ENST00000528787 RBM26Q5T8P6 1007 aaKnown RBP9.46□□□□□ -0.9
SSBP3-211ENST00000528787 APOBEC3HQ6NTF7 200 aaKnown RBP9.46□□□□□ -0.9
SSBP3-211ENST00000528787 CDC42EP5Q6NZY7 148 aa9.46□□□□□ -0.9
SSBP3-211ENST00000528787 SAMD7Q7Z3H4 446 aa9.46□□□□□ -0.9
SSBP3-211ENST00000528787 ZSCAN29Q8IWY8 852 aaPredicted RBP9.46□□□□□ -0.9
SSBP3-211ENST00000528787 SMC1BQ8NDV3 1235 aa9.46□□□□□ -0.9
SSBP3-211ENST00000528787 EDC3Q96F86 508 aaKnown RBP9.46□□□□□ -0.9
SSBP3-211ENST00000528787 ZBED3Q96IU2 234 aaPredicted RBP9.46□□□□□ -0.9
SSBP3-211ENST00000528787 PRMT6Q96LA8 375 aaPredicted RBP9.46□□□□□ -0.9
SSBP3-211ENST00000528787 STRBPQ96SI9 672 aaKnown RBP9.46□□□□□ -0.9
SSBP3-211ENST00000528787 RIOK1Q9BRS2 568 aaKnown RBP9.46□□□□□ -0.9
SSBP3-211ENST00000528787 MXD3Q9BW11 206 aa9.46□□□□□ -0.9
SSBP3-211ENST00000528787 NAPBQ9H115 298 aa9.46□□□□□ -0.9
SSBP3-211ENST00000528787 RNF41Q9H4P4 317 aaPredicted RBP9.46□□□□□ -0.9
SSBP3-211ENST00000528787 RRAGCQ9HB90 399 aa9.46□□□□□ -0.9
SSBP3-211ENST00000528787 VEZTQ9HBM0 779 aa9.46□□□□□ -0.9
SSBP3-211ENST00000528787 PI4KBQ9UBF8 816 aa9.46□□□□□ -0.9
SSBP3-211ENST00000528787 ZNF70Q9UC06 446 aaPredicted RBP9.46□□□□□ -0.9
SSBP3-211ENST00000528787 MYH1P12882 1939 aa9.46□□□□□ -0.9
SSBP3-211ENST00000528787 NAV1Q8NEY1 1877 aa9.45□□□□□ -0.9
SSBP3-211ENST00000528787 SGSM2O43147 1006 aa9.45□□□□□ -0.9
SSBP3-211ENST00000528787 PPP1R12BO60237 982 aaPredicted RBP9.45□□□□□ -0.9
SSBP3-211ENST00000528787 POLR3DP05423 398 aaPredicted RBP9.45□□□□□ -0.9
SSBP3-211ENST00000528787 FKBP1BP68106 108 aa9.45□□□□□ -0.9
SSBP3-211ENST00000528787 PDE4BQ07343 736 aa9.45□□□□□ -0.9
SSBP3-211ENST00000528787 FSTL1Q12841 308 aa9.45□□□□□ -0.9
SSBP3-211ENST00000528787 KRT32Q14532 448 aa9.45□□□□□ -0.9
SSBP3-211ENST00000528787 FOXP4Q8IVH2 680 aaPredicted RBP9.45□□□□□ -0.9
SSBP3-211ENST00000528787 MIGA1Q8NAN2 632 aa9.45□□□□□ -0.9
SSBP3-211ENST00000528787 OSBP2Q969R2 916 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms