RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 TBC1D9Q6ZT07 1266 aa17.54■□□□□ 0.4
CAPN1-216ENST00000528739 RPAP2Q8IXW5 612 aaPredicted RBP17.54■□□□□ 0.4
CAPN1-216ENST00000528739 REM2Q8IYK8 340 aaPredicted RBP17.54■□□□□ 0.4
CAPN1-216ENST00000528739 SNRKQ9NRH2 765 aa17.54■□□□□ 0.4
CAPN1-216ENST00000528739 LRP2BPQ9P2M1 347 aa17.54■□□□□ 0.4
CAPN1-216ENST00000528739 CAPN15O75808 1086 aa17.53■□□□□ 0.4
CAPN1-216ENST00000528739 PDE3AQ14432 1141 aa17.53■□□□□ 0.4
CAPN1-216ENST00000528739 LDLRAD1Q5T700 205 aa17.53■□□□□ 0.4
CAPN1-216ENST00000528739 CDAN1Q8IWY9 1227 aa17.53■□□□□ 0.4
CAPN1-216ENST00000528739 ANKRD13AQ8IZ07 590 aa17.53■□□□□ 0.4
CAPN1-216ENST00000528739 CLMNQ96JQ2 1002 aa17.53■□□□□ 0.4
CAPN1-216ENST00000528739 ARID4AP29374 1257 aaPredicted RBP17.52■□□□□ 0.4
CAPN1-216ENST00000528739 MCAMP43121 646 aa17.52■□□□□ 0.4
CAPN1-216ENST00000528739 GSTO1P78417 241 aa17.52■□□□□ 0.4
CAPN1-216ENST00000528739 FAM83AQ86UY5 434 aa17.52■□□□□ 0.4
CAPN1-216ENST00000528739 AACSQ86V21 672 aa17.52■□□□□ 0.4
CAPN1-216ENST00000528739 ZSCAN29Q8IWY8 852 aaPredicted RBP17.52■□□□□ 0.4
CAPN1-216ENST00000528739 HOOK2Q96ED9 719 aa17.52■□□□□ 0.4
CAPN1-216ENST00000528739 ELP3Q9H9T3 547 aa17.52■□□□□ 0.4
CAPN1-216ENST00000528739 IL1RAPL2Q9NP60 686 aa17.52■□□□□ 0.4
CAPN1-216ENST00000528739 ZBTB40Q9NUA8 1239 aa17.52■□□□□ 0.4
CAPN1-216ENST00000528739 RNF186Q9NXI6 227 aa17.52■□□□□ 0.4
CAPN1-216ENST00000528739 PDS5AQ29RF7 1337 aaKnown RBP17.51■□□□□ 0.39
CAPN1-216ENST00000528739 LDHCP07864 332 aa17.51■□□□□ 0.39
CAPN1-216ENST00000528739 BTDP43251 543 aa17.51■□□□□ 0.39
CAPN1-216ENST00000528739 MECOMQ03112 1051 aa17.51■□□□□ 0.39
CAPN1-216ENST00000528739 SREBF2Q12772 1141 aa17.51■□□□□ 0.39
CAPN1-216ENST00000528739 MAP3K11Q16584 847 aa17.51■□□□□ 0.39
CAPN1-216ENST00000528739 FKBP1CQ5VVH2 108 aa17.51■□□□□ 0.39
CAPN1-216ENST00000528739 SPRYD7Q5W111 196 aa17.51■□□□□ 0.39
CAPN1-216ENST00000528739 TEPSINQ96N21 525 aa17.51■□□□□ 0.39
CAPN1-216ENST00000528739 NOL10Q9BSC4 688 aaKnown RBP17.51■□□□□ 0.39
CAPN1-216ENST00000528739 CSADQ9Y600 493 aa17.51■□□□□ 0.39
CAPN1-216ENST00000528739 ARAP2Q8WZ64 1704 aa17.5■□□□□ 0.39
CAPN1-216ENST00000528739 MAP3K9P80192 1104 aa17.5■□□□□ 0.39
CAPN1-216ENST00000528739 PICALMQ13492 652 aa17.5■□□□□ 0.39
CAPN1-216ENST00000528739 DCAF15Q66K64 600 aa17.5■□□□□ 0.39
CAPN1-216ENST00000528739 MIGA2Q7L4E1 593 aa17.5■□□□□ 0.39
CAPN1-216ENST00000528739 FAM151AQ8WW52 585 aa17.5■□□□□ 0.39
CAPN1-216ENST00000528739 EAF2Q96CJ1 260 aaPredicted RBP17.5■□□□□ 0.39
CAPN1-216ENST00000528739 SSC5DA1L4H1 1573 aa17.49■□□□□ 0.39
CAPN1-216ENST00000528739 NFIAQ12857 509 aa17.49■□□□□ 0.39
CAPN1-216ENST00000528739 CLASRPQ8N2M8 674 aaKnown RBP17.49■□□□□ 0.39
CAPN1-216ENST00000528739 RHPN1Q8TCX5 695 aa17.49■□□□□ 0.39
CAPN1-216ENST00000528739 WNK4Q96J92 1243 aa17.49■□□□□ 0.39
CAPN1-216ENST00000528739 TLR7Q9NYK1 1049 aaKnown RBP17.49■□□□□ 0.39
CAPN1-216ENST00000528739 DBNLQ9UJU6 430 aaKnown RBP17.49■□□□□ 0.39
CAPN1-216ENST00000528739 MYH13Q9UKX3 1938 aa17.49■□□□□ 0.39
CAPN1-216ENST00000528739 MROH7-TTC4A0A0A0MT08 1334 aa17.48■□□□□ 0.39
CAPN1-216ENST00000528739 THSD7BQ9C0I4 1608 aa17.48■□□□□ 0.39
CAPN1-216ENST00000528739 MANSC4A6NHS7 340 aaPredicted RBP17.48■□□□□ 0.39
CAPN1-216ENST00000528739 UNCXA6NJT0 531 aa17.48■□□□□ 0.39
CAPN1-216ENST00000528739 ZBTB22O15209 634 aa17.48■□□□□ 0.39
CAPN1-216ENST00000528739 ZAP70P43403 619 aa17.48■□□□□ 0.39
CAPN1-216ENST00000528739 KIF1BPQ96EK5 621 aa17.48■□□□□ 0.39
CAPN1-216ENST00000528739 WRNIP1Q96S55 665 aa17.48■□□□□ 0.39
CAPN1-216ENST00000528739 SAGE1Q9NXZ1 904 aa17.48■□□□□ 0.39
CAPN1-216ENST00000528739 ECM29Q5VYK3 1845 aa17.48■□□□□ 0.39
CAPN1-216ENST00000528739 TBC1D8O95759 1140 aa17.47■□□□□ 0.39
CAPN1-216ENST00000528739 IFIT2P09913 472 aaKnown RBP17.47■□□□□ 0.39
CAPN1-216ENST00000528739 ZBTB48P10074 688 aaPredicted RBP17.47■□□□□ 0.39
CAPN1-216ENST00000528739 RGS3P49796 1198 aa17.47■□□□□ 0.39
CAPN1-216ENST00000528739 NAA16Q6N069 864 aaPredicted RBP17.47■□□□□ 0.39
CAPN1-216ENST00000528739 NSUN4Q96CB9 384 aaKnown RBP17.47■□□□□ 0.39
CAPN1-216ENST00000528739 OPTNQ96CV9 577 aa17.47■□□□□ 0.39
CAPN1-216ENST00000528739 ZNF341Q9BYN7 854 aa17.47■□□□□ 0.39
CAPN1-216ENST00000528739 GAKO14976 1311 aa17.47■□□□□ 0.39
CAPN1-216ENST00000528739 RAB11FIP3O75154 756 aa17.46■□□□□ 0.39
CAPN1-216ENST00000528739 TM4SF4P48230 202 aa17.46■□□□□ 0.39
CAPN1-216ENST00000528739 VGLL4Q14135 290 aa17.46■□□□□ 0.39
CAPN1-216ENST00000528739 SIRT2Q8IXJ6 389 aa17.46■□□□□ 0.39
CAPN1-216ENST00000528739 OTUD5Q96G74 571 aa17.46■□□□□ 0.39
CAPN1-216ENST00000528739 FAM163AQ96GL9 167 aaPredicted RBP17.46■□□□□ 0.39
CAPN1-216ENST00000528739 FAM198AQ9UFP1 575 aa17.46■□□□□ 0.39
CAPN1-216ENST00000528739 GPR75-ASB3A0A0A6YYF3 556 aa17.45■□□□□ 0.38
CAPN1-216ENST00000528739 IDH1O75874 414 aaKnown RBP17.45■□□□□ 0.38
CAPN1-216ENST00000528739 BAG3O95817 575 aa17.45■□□□□ 0.38
CAPN1-216ENST00000528739 CYP2E1P05181 493 aaPredicted RBP17.45■□□□□ 0.38
CAPN1-216ENST00000528739 INHBEP58166 350 aa17.45■□□□□ 0.38
CAPN1-216ENST00000528739 OTUD7BQ6GQQ9 843 aa17.45■□□□□ 0.38
CAPN1-216ENST00000528739 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.45■□□□□ 0.38
CAPN1-216ENST00000528739 ZFPM1Q8IX07 1006 aa17.45■□□□□ 0.38
CAPN1-216ENST00000528739 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.45■□□□□ 0.38
CAPN1-216ENST00000528739 ZKSCAN4Q969J2 545 aaPredicted RBP17.45■□□□□ 0.38
CAPN1-216ENST00000528739 ENTPD3O75355 529 aa17.44■□□□□ 0.38
CAPN1-216ENST00000528739 TEX11Q8IYF3 940 aa17.44■□□□□ 0.38
CAPN1-216ENST00000528739 CNKSR2Q8WXI2 1034 aa17.44■□□□□ 0.38
CAPN1-216ENST00000528739 ZNF512BQ96KM6 892 aaPredicted RBP17.44■□□□□ 0.38
CAPN1-216ENST00000528739 IDI2Q9BXS1 227 aa17.44■□□□□ 0.38
CAPN1-216ENST00000528739 NDUFB9Q9Y6M9 179 aa17.44■□□□□ 0.38
CAPN1-216ENST00000528739 ALDH1A1P00352 501 aa17.43■□□□□ 0.38
CAPN1-216ENST00000528739 GJA5P36382 358 aa17.43■□□□□ 0.38
CAPN1-216ENST00000528739 RRP1P56182 461 aaKnown RBP17.43■□□□□ 0.38
CAPN1-216ENST00000528739 DGKZQ13574 1117 aa17.43■□□□□ 0.38
CAPN1-216ENST00000528739 PIH1D3Q9NQM4 214 aaKnown RBP17.43■□□□□ 0.38
CAPN1-216ENST00000528739 AATFQ9NY61 560 aaKnown RBP eCLIP17.43■□□□□ 0.386e-6■■■■■ 54.7
CAPN1-216ENST00000528739 CYP7A1P22680 504 aa17.42■□□□□ 0.38
CAPN1-216ENST00000528739 IFNL1Q8IU54 200 aa17.42■□□□□ 0.38
CAPN1-216ENST00000528739 ZNF384Q8TF68 577 aa17.42■□□□□ 0.38
CAPN1-216ENST00000528739 DNAJC2Q99543 621 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms