RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 LAMB1P07942 1786 aa19.32■□□□□ 0.68
CLNS1A-210ENST00000528364 SPDYE5A6NIY4 337 aa19.32■□□□□ 0.68
CLNS1A-210ENST00000528364 LDHBP07195 334 aaKnown RBP19.32■□□□□ 0.68
CLNS1A-210ENST00000528364 INPP5BP32019 993 aa19.32■□□□□ 0.68
CLNS1A-210ENST00000528364 TAF1CQ15572 869 aaPredicted RBP19.32■□□□□ 0.68
CLNS1A-210ENST00000528364 INTS3Q68E01 1043 aaKnown RBP19.32■□□□□ 0.68
CLNS1A-210ENST00000528364 ZFPM1Q8IX07 1006 aa19.32■□□□□ 0.68
CLNS1A-210ENST00000528364 FAM151AQ8WW52 585 aa19.32■□□□□ 0.68
CLNS1A-210ENST00000528364 USP40Q9NVE5 1235 aa19.32■□□□□ 0.68
CLNS1A-210ENST00000528364 PTPN22Q9Y2R2 807 aa19.32■□□□□ 0.68
CLNS1A-210ENST00000528364 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.32■□□□□ 0.68
CLNS1A-210ENST00000528364 IRF6O14896 467 aa19.31■□□□□ 0.68
CLNS1A-210ENST00000528364 BCAR3O75815 825 aa19.31■□□□□ 0.68
CLNS1A-210ENST00000528364 CCDC102BQ68D86 513 aa19.31■□□□□ 0.68
CLNS1A-210ENST00000528364 ERO1BQ86YB8 467 aa19.31■□□□□ 0.68
CLNS1A-210ENST00000528364 ARHGAP45Q92619 1136 aa19.31■□□□□ 0.68
CLNS1A-210ENST00000528364 EFCC1Q9HA90 598 aa19.31■□□□□ 0.68
CLNS1A-210ENST00000528364 FAM198AQ9UFP1 575 aa19.31■□□□□ 0.68
CLNS1A-210ENST00000528364 DENND2AQ9ULE3 1009 aa19.31■□□□□ 0.68
CLNS1A-210ENST00000528364 HDAC5Q9UQL6 1122 aa19.31■□□□□ 0.68
CLNS1A-210ENST00000528364 MYH13Q9UKX3 1938 aa19.31■□□□□ 0.68
CLNS1A-210ENST00000528364 TFCP2Q12800 502 aa19.3■□□□□ 0.68
CLNS1A-210ENST00000528364 ZNF341Q9BYN7 854 aa19.3■□□□□ 0.68
CLNS1A-210ENST00000528364 ZFYVE28Q9HCC9 887 aa19.3■□□□□ 0.68
CLNS1A-210ENST00000528364 KIAA0100Q14667 2235 aaKnown RBP19.3■□□□□ 0.68
CLNS1A-210ENST00000528364 AK9Q5TCS8 1911 aa19.29■□□□□ 0.68
CLNS1A-210ENST00000528364 POTEFA5A3E0 1075 aa19.29■□□□□ 0.68
CLNS1A-210ENST00000528364 BTBD19C9JJ37 291 aa19.29■□□□□ 0.68
CLNS1A-210ENST00000528364 SRGAP3O43295 1099 aa19.29■□□□□ 0.68
CLNS1A-210ENST00000528364 DCAF15Q66K64 600 aa19.29■□□□□ 0.68
CLNS1A-210ENST00000528364 SALL1Q9NSC2 1324 aa19.28■□□□□ 0.68
CLNS1A-210ENST00000528364 GNAI3P08754 354 aa19.28■□□□□ 0.68
CLNS1A-210ENST00000528364 CETPP11597 493 aa19.28■□□□□ 0.68
CLNS1A-210ENST00000528364 RASGRF1Q13972 1273 aa19.28■□□□□ 0.68
CLNS1A-210ENST00000528364 FRAT1Q92837 279 aaPredicted RBP19.28■□□□□ 0.68
CLNS1A-210ENST00000528364 CLUAP1Q96AJ1 413 aa19.28■□□□□ 0.68
CLNS1A-210ENST00000528364 HOOK2Q96ED9 719 aa19.28■□□□□ 0.68
CLNS1A-210ENST00000528364 XAGE2Q96GT9 111 aa19.28■□□□□ 0.68
CLNS1A-210ENST00000528364 SEMA3EO15041 775 aa19.27■□□□□ 0.68
CLNS1A-210ENST00000528364 ECM2O94769 699 aaPredicted RBP19.27■□□□□ 0.68
CLNS1A-210ENST00000528364 SLURP2P0DP57 97 aa19.27■□□□□ 0.68
CLNS1A-210ENST00000528364 TRIM27P14373 513 aa19.27■□□□□ 0.68
CLNS1A-210ENST00000528364 PPIL2Q13356 520 aa19.27■□□□□ 0.68
CLNS1A-210ENST00000528364 SNAPC2Q13487 334 aa19.27■□□□□ 0.68
CLNS1A-210ENST00000528364 ABCF2Q9UG63 623 aa19.27■□□□□ 0.68
CLNS1A-210ENST00000528364 ZNF112Q9UJU3 913 aa19.27■□□□□ 0.68
CLNS1A-210ENST00000528364 RPAP1Q9BWH6 1393 aaPredicted RBP19.27■□□□□ 0.68
CLNS1A-210ENST00000528364 A0A1B0GUL7 405 aa19.26■□□□□ 0.67
CLNS1A-210ENST00000528364 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.26■□□□□ 0.67
CLNS1A-210ENST00000528364 NEUROD6Q96NK8 337 aa19.26■□□□□ 0.67
CLNS1A-210ENST00000528364 ARHGAP39Q9C0H5 1083 aa19.26■□□□□ 0.67
CLNS1A-210ENST00000528364 SLC34A2O95436 690 aa19.25■□□□□ 0.67
CLNS1A-210ENST00000528364 RGS3P49796 1198 aa19.25■□□□□ 0.67
CLNS1A-210ENST00000528364 PPATQ06203 517 aa19.25■□□□□ 0.67
CLNS1A-210ENST00000528364 MTX1Q13505 466 aa19.25■□□□□ 0.67
CLNS1A-210ENST00000528364 SH3BP5LQ7L8J4 393 aa19.25■□□□□ 0.67
CLNS1A-210ENST00000528364 MYH2Q9UKX2 1941 aa19.24■□□□□ 0.67
CLNS1A-210ENST00000528364 PNMA6EA0A0J9YXQ4 647 aa19.24■□□□□ 0.67
CLNS1A-210ENST00000528364 IPO8O15397 1037 aaKnown RBP19.24■□□□□ 0.67
CLNS1A-210ENST00000528364 TLR2O60603 784 aa19.24■□□□□ 0.67
CLNS1A-210ENST00000528364 ATF7IPQ6VMQ6 1270 aa19.24■□□□□ 0.67
CLNS1A-210ENST00000528364 PTCH2Q9Y6C5 1203 aa19.24■□□□□ 0.67
CLNS1A-210ENST00000528364 PI16Q6UXB8 463 aa19.23■□□□□ 0.67
CLNS1A-210ENST00000528364 TBC1D9Q6ZT07 1266 aa19.23■□□□□ 0.67
CLNS1A-210ENST00000528364 DZIP1Q86YF9 867 aaKnown RBP19.23■□□□□ 0.67
CLNS1A-210ENST00000528364 ZNF384Q8TF68 577 aa19.23■□□□□ 0.67
CLNS1A-210ENST00000528364 ARMC5Q96C12 935 aa19.23■□□□□ 0.67
CLNS1A-210ENST00000528364 DDX4Q9NQI0 724 aaKnown RBP19.23■□□□□ 0.67
CLNS1A-210ENST00000528364 AKAP2Q9Y2D5 859 aa19.23■□□□□ 0.67
CLNS1A-210ENST00000528364 GAKO14976 1311 aa19.23■□□□□ 0.67
CLNS1A-210ENST00000528364 ZBTB22O15209 634 aa19.22■□□□□ 0.67
CLNS1A-210ENST00000528364 GNAI2P04899 355 aa19.22■□□□□ 0.67
CLNS1A-210ENST00000528364 EN2P19622 333 aaPredicted RBP19.22■□□□□ 0.67
CLNS1A-210ENST00000528364 MOGSQ13724 837 aa19.22■□□□□ 0.67
CLNS1A-210ENST00000528364 ZGPATQ8N5A5 531 aaKnown RBP19.22■□□□□ 0.67
CLNS1A-210ENST00000528364 IDI2Q9BXS1 227 aa19.22■□□□□ 0.67
CLNS1A-210ENST00000528364 HMG20BQ9P0W2 317 aa19.22■□□□□ 0.67
CLNS1A-210ENST00000528364 CPA4Q9UI42 421 aa19.22■□□□□ 0.67
CLNS1A-210ENST00000528364 KCNH4Q9UQ05 1017 aa19.22■□□□□ 0.67
CLNS1A-210ENST00000528364 ZSWIM8A7E2V4 1837 aa19.21■□□□□ 0.67
CLNS1A-210ENST00000528364 DDTLA6NHG4 134 aaPredicted RBP19.21■□□□□ 0.67
CLNS1A-210ENST00000528364 PHF20L1A8MW92 1017 aa19.21■□□□□ 0.67
CLNS1A-210ENST00000528364 WDHD1O75717 1129 aaPredicted RBP19.21■□□□□ 0.67
CLNS1A-210ENST00000528364 MYCP01106 439 aaPredicted RBP19.21■□□□□ 0.67
CLNS1A-210ENST00000528364 BTDP43251 543 aa19.21■□□□□ 0.67
CLNS1A-210ENST00000528364 MECOMQ03112 1051 aa19.21■□□□□ 0.67
CLNS1A-210ENST00000528364 MVPQ14764 893 aaKnown RBP19.21■□□□□ 0.67
CLNS1A-210ENST00000528364 NOL9Q5SY16 702 aaKnown RBP19.21■□□□□ 0.67
CLNS1A-210ENST00000528364 PRPF38BQ5VTL8 546 aaKnown RBP19.21■□□□□ 0.67
CLNS1A-210ENST00000528364 TMEM57Q8N5G2 664 aa19.21■□□□□ 0.67
CLNS1A-210ENST00000528364 FAM163AQ96GL9 167 aaPredicted RBP19.21■□□□□ 0.67
CLNS1A-210ENST00000528364 PDHXO00330 501 aa19.2■□□□□ 0.66
CLNS1A-210ENST00000528364 ENTPD3O75355 529 aa19.2■□□□□ 0.66
CLNS1A-210ENST00000528364 CTGFP29279 349 aa19.2■□□□□ 0.66
CLNS1A-210ENST00000528364 LACTBP83111 547 aaPredicted RBP19.2■□□□□ 0.66
CLNS1A-210ENST00000528364 G3BP1Q13283 466 aaKnown RBP eCLIP19.2■□□□□ 0.66
CLNS1A-210ENST00000528364 PICALMQ13492 652 aa19.2■□□□□ 0.66
CLNS1A-210ENST00000528364 SPTY2D1Q68D10 685 aaPredicted RBP19.2■□□□□ 0.66
CLNS1A-210ENST00000528364 C17orf99Q6UX52 265 aa19.2■□□□□ 0.66
CLNS1A-210ENST00000528364 ERICH6Q7L0X2 663 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms