RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 GRIK5Q16478 980 aa11.82□□□□□ -0.52
CHD7-208ENST00000528280 PKN2Q16513 984 aaKnown RBP11.82□□□□□ -0.52
CHD7-208ENST00000528280 HSP90AB4PQ58FF6 505 aa11.82□□□□□ -0.52
CHD7-208ENST00000528280 CCDC158Q5M9N0 1113 aa11.82□□□□□ -0.52
CHD7-208ENST00000528280 DCAF15Q66K64 600 aa11.82□□□□□ -0.52
CHD7-208ENST00000528280 FAM163AQ96GL9 167 aaPredicted RBP11.82□□□□□ -0.52
CHD7-208ENST00000528280 NOP58Q9Y2X3 529 aaKnown RBP11.82□□□□□ -0.52
CHD7-208ENST00000528280 ECM29Q5VYK3 1845 aa11.81□□□□□ -0.52
CHD7-208ENST00000528280 ADORA1P30542 326 aa11.81□□□□□ -0.52
CHD7-208ENST00000528280 GSTO1P78417 241 aa11.81□□□□□ -0.52
CHD7-208ENST00000528280 NOM1Q5C9Z4 860 aaKnown RBP11.81□□□□□ -0.52
CHD7-208ENST00000528280 ERICH6Q7L0X2 663 aa11.81□□□□□ -0.52
CHD7-208ENST00000528280 DZIP1Q86YF9 867 aaKnown RBP11.81□□□□□ -0.52
CHD7-208ENST00000528280 ERC1Q8IUD2 1116 aa11.81□□□□□ -0.52
CHD7-208ENST00000528280 FAM151AQ8WW52 585 aa11.81□□□□□ -0.52
CHD7-208ENST00000528280 TEPSINQ96N21 525 aa11.81□□□□□ -0.52
CHD7-208ENST00000528280 USP40Q9NVE5 1235 aa11.81□□□□□ -0.52
CHD7-208ENST00000528280 ABCF2Q9UG63 623 aa11.81□□□□□ -0.52
CHD7-208ENST00000528280 RCAN3Q9UKA8 241 aa11.81□□□□□ -0.52
CHD7-208ENST00000528280 DDX19BQ9UMR2 479 aa11.81□□□□□ -0.52
CHD7-208ENST00000528280 CSADQ9Y600 493 aa11.81□□□□□ -0.52
CHD7-208ENST00000528280 DLL1O00548 723 aa11.8□□□□□ -0.52
CHD7-208ENST00000528280 PRDX5P30044 214 aa11.8□□□□□ -0.52
CHD7-208ENST00000528280 RASGRF1Q13972 1273 aa11.8□□□□□ -0.52
CHD7-208ENST00000528280 RPAP2Q8IXW5 612 aaPredicted RBP11.8□□□□□ -0.52
CHD7-208ENST00000528280 SPATA5Q8NB90 893 aa11.8□□□□□ -0.52
CHD7-208ENST00000528280 TMEM39BQ9GZU3 492 aa11.8□□□□□ -0.52
CHD7-208ENST00000528280 HMMRO75330 724 aa11.79□□□□□ -0.52
CHD7-208ENST00000528280 WDHD1O75717 1129 aaPredicted RBP11.79□□□□□ -0.52
CHD7-208ENST00000528280 RLBP1P12271 317 aa11.79□□□□□ -0.52
CHD7-208ENST00000528280 ARID4AP29374 1257 aaPredicted RBP11.79□□□□□ -0.52
CHD7-208ENST00000528280 PDE3AQ14432 1141 aa11.79□□□□□ -0.52
CHD7-208ENST00000528280 TNNI3KQ59H18 835 aa11.79□□□□□ -0.52
CHD7-208ENST00000528280 CDC42EP5Q6NZY7 148 aa11.79□□□□□ -0.52
CHD7-208ENST00000528280 WNK4Q96J92 1243 aa11.79□□□□□ -0.52
CHD7-208ENST00000528280 ZNF512BQ96KM6 892 aaPredicted RBP11.79□□□□□ -0.52
CHD7-208ENST00000528280 CFHR5Q9BXR6 569 aa11.79□□□□□ -0.52
CHD7-208ENST00000528280 DAGLAQ9Y4D2 1042 aa11.79□□□□□ -0.52
CHD7-208ENST00000528280 FPGT-TNNI3KV9GXZ4 949 aa11.79□□□□□ -0.52
CHD7-208ENST00000528280 AOX1Q06278 1338 aa11.79□□□□□ -0.52
CHD7-208ENST00000528280 RBBP6Q7Z6E9 1792 aaKnown RBP11.79□□□□□ -0.52
CHD7-208ENST00000528280 MKI67P46013 3256 aaKnown RBP11.78□□□□□ -0.52
CHD7-208ENST00000528280 ENTPD3O75355 529 aa11.78□□□□□ -0.52
CHD7-208ENST00000528280 DIXDC1Q155Q3 683 aa11.78□□□□□ -0.52
CHD7-208ENST00000528280 TTC39AQ5SRH9 613 aa11.78□□□□□ -0.52
CHD7-208ENST00000528280 TMED8Q6PL24 325 aaPredicted RBP11.78□□□□□ -0.52
CHD7-208ENST00000528280 PANK1Q8TE04 598 aa11.78□□□□□ -0.52
CHD7-208ENST00000528280 NOL10Q9BSC4 688 aaKnown RBP11.78□□□□□ -0.52
CHD7-208ENST00000528280 IDI2Q9BXS1 227 aa11.78□□□□□ -0.52
CHD7-208ENST00000528280 ZNF341Q9BYN7 854 aa11.78□□□□□ -0.52
CHD7-208ENST00000528280 HMG20BQ9P0W2 317 aa11.78□□□□□ -0.52
CHD7-208ENST00000528280 LRP2BPQ9P2M1 347 aa11.78□□□□□ -0.52
CHD7-208ENST00000528280 ARAP2Q8WZ64 1704 aa11.77□□□□□ -0.52
CHD7-208ENST00000528280 TESPA1A2RU30 521 aaPredicted RBP11.77□□□□□ -0.53
CHD7-208ENST00000528280 NPM3O75607 178 aaKnown RBP11.77□□□□□ -0.53
CHD7-208ENST00000528280 GTF2A2P52657 109 aa11.77□□□□□ -0.53
CHD7-208ENST00000528280 CACNB3P54284 484 aa11.77□□□□□ -0.53
CHD7-208ENST00000528280 MKRN3Q13064 507 aaKnown RBP11.77□□□□□ -0.53
CHD7-208ENST00000528280 CEP85Q6P2H3 762 aa11.77□□□□□ -0.53
CHD7-208ENST00000528280 IFNL1Q8IU54 200 aa11.77□□□□□ -0.53
CHD7-208ENST00000528280 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.77□□□□□ -0.53
CHD7-208ENST00000528280 CLMNQ96JQ2 1002 aa11.77□□□□□ -0.53
CHD7-208ENST00000528280 C1orf115Q9H7X2 142 aa11.77□□□□□ -0.53
CHD7-208ENST00000528280 GAKO14976 1311 aa11.77□□□□□ -0.53
CHD7-208ENST00000528280 RPAP1Q9BWH6 1393 aaPredicted RBP11.77□□□□□ -0.53
CHD7-208ENST00000528280 GPR75-ASB3A0A0A6YYF3 556 aa11.76□□□□□ -0.53
CHD7-208ENST00000528280 TBC1D8O95759 1140 aa11.76□□□□□ -0.53
CHD7-208ENST00000528280 BAG3O95817 575 aa11.76□□□□□ -0.53
CHD7-208ENST00000528280 MECOMQ03112 1051 aa11.76□□□□□ -0.53
CHD7-208ENST00000528280 TCP10Q12799 353 aa11.76□□□□□ -0.53
CHD7-208ENST00000528280 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.76□□□□□ -0.53
CHD7-208ENST00000528280 ERO1BQ86YB8 467 aa11.76□□□□□ -0.53
CHD7-208ENST00000528280 OPTNQ96CV9 577 aa11.76□□□□□ -0.53
CHD7-208ENST00000528280 ELP3Q9H9T3 547 aa11.76□□□□□ -0.53
CHD7-208ENST00000528280 ZBTB40Q9NUA8 1239 aa11.76□□□□□ -0.53
CHD7-208ENST00000528280 RAI14Q9P0K7 980 aa11.76□□□□□ -0.53
CHD7-208ENST00000528280 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.76□□□□□ -0.53
CHD7-208ENST00000528280 FZD1Q9UP38 647 aa11.76□□□□□ -0.53
CHD7-208ENST00000528280 MYH13Q9UKX3 1938 aa11.76□□□□□ -0.53
CHD7-208ENST00000528280 GPR25O00155 361 aa11.75□□□□□ -0.53
CHD7-208ENST00000528280 RAB11FIP3O75154 756 aa11.75□□□□□ -0.53
CHD7-208ENST00000528280 PLCG2P16885 1265 aa11.75□□□□□ -0.53
CHD7-208ENST00000528280 VGLL4Q14135 290 aa11.75□□□□□ -0.53
CHD7-208ENST00000528280 ARHGEF6Q15052 776 aa11.75□□□□□ -0.53
CHD7-208ENST00000528280 CERS3Q8IU89 383 aa11.75□□□□□ -0.53
CHD7-208ENST00000528280 ZSCAN29Q8IWY8 852 aaPredicted RBP11.75□□□□□ -0.53
CHD7-208ENST00000528280 NSUN4Q96CB9 384 aaKnown RBP11.75□□□□□ -0.53
CHD7-208ENST00000528280 WRNIP1Q96S55 665 aa11.75□□□□□ -0.53
CHD7-208ENST00000528280 ZCCHC17Q9NP64 241 aaKnown RBP11.75□□□□□ -0.53
CHD7-208ENST00000528280 ZNF112Q9UJU3 913 aa11.75□□□□□ -0.53
CHD7-208ENST00000528280 COG6Q9Y2V7 657 aa11.75□□□□□ -0.53
CHD7-208ENST00000528280 MROH7-TTC4A0A0A0MT08 1334 aa11.75□□□□□ -0.53
CHD7-208ENST00000528280 SSC5DA1L4H1 1573 aa11.75□□□□□ -0.53
CHD7-208ENST00000528280 SZT2Q5T011 3432 aa11.74□□□□□ -0.53
CHD7-208ENST00000528280 KIAA0100Q14667 2235 aaKnown RBP11.74□□□□□ -0.53
CHD7-208ENST00000528280 SPDYE5A6NIY4 337 aa11.74□□□□□ -0.53
CHD7-208ENST00000528280 FKTNO75072 461 aa11.74□□□□□ -0.53
CHD7-208ENST00000528280 CETPP11597 493 aa11.74□□□□□ -0.53
CHD7-208ENST00000528280 MCAMP43121 646 aa11.74□□□□□ -0.53
CHD7-208ENST00000528280 BTDP43251 543 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms