RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 SLC4A8Q2Y0W8 1093 aa8.16□□□□□ -1.1
CTNND1-218ENST00000528232 CCDC129Q6ZRS4 1044 aa8.16□□□□□ -1.1
CTNND1-218ENST00000528232 MYRIPQ8NFW9 859 aa8.16□□□□□ -1.1
CTNND1-218ENST00000528232 FAM227BQ96M60 508 aa8.16□□□□□ -1.1
CTNND1-218ENST00000528232 CEP152O94986 1710 aa8.16□□□□□ -1.1
CTNND1-218ENST00000528232 IGSF1Q8N6C5 1336 aa8.16□□□□□ -1.1
CTNND1-218ENST00000528232 IDEP14735 1019 aa8.16□□□□□ -1.1
CTNND1-218ENST00000528232 CAPN2P17655 700 aa8.16□□□□□ -1.1
CTNND1-218ENST00000528232 CETN2P41208 172 aa8.16□□□□□ -1.1
CTNND1-218ENST00000528232 FAM160A1Q05DH4 1040 aa8.16□□□□□ -1.1
CTNND1-218ENST00000528232 RPAINQ86UA6 219 aa8.16□□□□□ -1.1
CTNND1-218ENST00000528232 SPATS2Q86XZ4 545 aaKnown RBP8.16□□□□□ -1.1
CTNND1-218ENST00000528232 ARFGAP2Q8N6H7 521 aa8.16□□□□□ -1.1
CTNND1-218ENST00000528232 POLR1AO95602 1720 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-218ENST00000528232 ATP5JP18859 108 aa8.16□□□□□ -1.1
CTNND1-218ENST00000528232 ARHGAP25P42331 645 aa8.16□□□□□ -1.1
CTNND1-218ENST00000528232 NAPAP54920 295 aa8.16□□□□□ -1.1
CTNND1-218ENST00000528232 ZNF445P59923 1031 aa8.16□□□□□ -1.1
CTNND1-218ENST00000528232 HELBQ8NG08 1087 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-218ENST00000528232 GIGYF1O75420 1035 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-218ENST00000528232 CETN1Q12798 172 aa8.16□□□□□ -1.1
CTNND1-218ENST00000528232 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-218ENST00000528232 MIGA1Q8NAN2 632 aa8.16□□□□□ -1.1
CTNND1-218ENST00000528232 RRP36Q96EU6 259 aaKnown RBP8.16□□□□□ -1.1
CTNND1-218ENST00000528232 FAM89AQ96GI7 184 aa8.16□□□□□ -1.1
CTNND1-218ENST00000528232 ADGRB3O60242 1522 aa8.16□□□□□ -1.1
CTNND1-218ENST00000528232 SH3TC1Q8TE82 1336 aa8.16□□□□□ -1.1
CTNND1-218ENST00000528232 CCDC121Q6ZUS5 278 aa8.16□□□□□ -1.1
CTNND1-218ENST00000528232 ZNF830Q96NB3 372 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-218ENST00000528232 DSCC1Q9BVC3 393 aa8.16□□□□□ -1.1
CTNND1-218ENST00000528232 USP44Q9H0E7 712 aa8.16□□□□□ -1.1
CTNND1-218ENST00000528232 LUC7L2Q9Y383 392 aaKnown RBP8.16□□□□□ -1.1
CTNND1-218ENST00000528232 CDC42BPGQ6DT37 1551 aa8.15□□□□□ -1.1
CTNND1-218ENST00000528232 MROH5Q6ZUA9 1318 aa8.15□□□□□ -1.1
CTNND1-218ENST00000528232 ABCA9Q8IUA7 1624 aa8.15□□□□□ -1.1
CTNND1-218ENST00000528232 TIMM10P62072 90 aa8.15□□□□□ -1.1
CTNND1-218ENST00000528232 ANKS4BQ8N8V4 417 aa8.15□□□□□ -1.1
CTNND1-218ENST00000528232 KLHDC4Q8TBB5 520 aa8.15□□□□□ -1.1
CTNND1-218ENST00000528232 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.15□□□□□ -1.17e-6■□□□□ 8.3
CTNND1-218ENST00000528232 ERBB4Q15303 1308 aa8.15□□□□□ -1.1
CTNND1-218ENST00000528232 PSMA7O14818 248 aa8.15□□□□□ -1.1
CTNND1-218ENST00000528232 LDHBP07195 334 aaKnown RBP8.15□□□□□ -1.1
CTNND1-218ENST00000528232 PHKG2P15735 406 aa8.15□□□□□ -1.1
CTNND1-218ENST00000528232 CKAP4Q07065 602 aaKnown RBP8.15□□□□□ -1.1
CTNND1-218ENST00000528232 BEND3Q5T5X7 828 aa8.15□□□□□ -1.1
CTNND1-218ENST00000528232 DHX58Q96C10 678 aa8.15□□□□□ -1.1
CTNND1-218ENST00000528232 CLSTN2Q9H4D0 955 aa8.15□□□□□ -1.1
CTNND1-218ENST00000528232 ROBO2Q9HCK4 1378 aa8.15□□□□□ -1.1
CTNND1-218ENST00000528232 CLNS1AP54105 237 aaKnown RBP8.15□□□□□ -1.1
CTNND1-218ENST00000528232 GNG11P61952 73 aa8.15□□□□□ -1.1
CTNND1-218ENST00000528232 TUBB2AQ13885 445 aa8.15□□□□□ -1.1
CTNND1-218ENST00000528232 NAA25Q14CX7 972 aa8.15□□□□□ -1.1
CTNND1-218ENST00000528232 TUBB2BQ9BVA1 445 aa8.15□□□□□ -1.1
CTNND1-218ENST00000528232 MCM9Q9NXL9 1143 aa8.15□□□□□ -1.1
CTNND1-218ENST00000528232 USH1CQ9Y6N9 552 aa8.15□□□□□ -1.1
CTNND1-218ENST00000528232 TBCAO75347 108 aaKnown RBP8.15□□□□□ -1.11
CTNND1-218ENST00000528232 CYLC1P35663 651 aaPredicted RBP8.15□□□□□ -1.11
CTNND1-218ENST00000528232 ZNF496Q96IT1 587 aaPredicted RBP8.15□□□□□ -1.11
CTNND1-218ENST00000528232 TACO1Q9BSH4 297 aaKnown RBP8.15□□□□□ -1.11
CTNND1-218ENST00000528232 DNAI2Q9GZS0 605 aa8.15□□□□□ -1.11
CTNND1-218ENST00000528232 CPSF1Q10570 1443 aaKnown RBP8.15□□□□□ -1.11
CTNND1-218ENST00000528232 DEXIO95424 95 aa8.14□□□□□ -1.11
CTNND1-218ENST00000528232 ZNF853P0CG23 659 aa8.14□□□□□ -1.11
CTNND1-218ENST00000528232 ERO1AQ96HE7 468 aa8.14□□□□□ -1.11
CTNND1-218ENST00000528232 CCDC172P0C7W6 258 aa8.14□□□□□ -1.11
CTNND1-218ENST00000528232 IFI16Q16666 785 aaKnown RBP8.14□□□□□ -1.11
CTNND1-218ENST00000528232 LPIN2Q92539 896 aa8.14□□□□□ -1.11
CTNND1-218ENST00000528232 RBM17Q96I25 401 aaKnown RBP8.14□□□□□ -1.11
CTNND1-218ENST00000528232 VCXQ9H320 206 aa8.14□□□□□ -1.11
CTNND1-218ENST00000528232 TMX1Q9H3N1 280 aa8.14□□□□□ -1.11
CTNND1-218ENST00000528232 PTCH1Q13635 1447 aa8.14□□□□□ -1.11
CTNND1-218ENST00000528232 BICDL2A1A5D9 508 aa8.14□□□□□ -1.11
CTNND1-218ENST00000528232 GPAA1O43292 621 aa8.14□□□□□ -1.11
CTNND1-218ENST00000528232 MYO1BO43795 1136 aa8.14□□□□□ -1.11
CTNND1-218ENST00000528232 TRIM21P19474 475 aaKnown RBP8.14□□□□□ -1.11
CTNND1-218ENST00000528232 HSPA2P54652 639 aa8.14□□□□□ -1.11
CTNND1-218ENST00000528232 CEP120Q8N960 986 aa8.14□□□□□ -1.11
CTNND1-218ENST00000528232 DDX12PQ92771 950 aa8.14□□□□□ -1.11
CTNND1-218ENST00000528232 C8orf37Q96NL8 207 aa8.14□□□□□ -1.11
CTNND1-218ENST00000528232 CCDC113Q9H0I3 377 aa8.14□□□□□ -1.11
CTNND1-218ENST00000528232 ANGEL1Q9UNK9 670 aaKnown RBP8.14□□□□□ -1.11
CTNND1-218ENST00000528232 ALKQ9UM73 1620 aa8.14□□□□□ -1.11
CTNND1-218ENST00000528232 IFFO1Q0D2I5 559 aa8.14□□□□□ -1.11
CTNND1-218ENST00000528232 RILPL1Q5EBL4 403 aa8.14□□□□□ -1.11
CTNND1-218ENST00000528232 TEX2Q8IWB9 1127 aa8.14□□□□□ -1.11
CTNND1-218ENST00000528232 ZNF594Q96JF6 807 aaPredicted RBP8.14□□□□□ -1.11
CTNND1-218ENST00000528232 NAP1L4Q99733 375 aaKnown RBP8.14□□□□□ -1.11
CTNND1-218ENST00000528232 RBSNQ9H1K0 784 aa8.14□□□□□ -1.11
CTNND1-218ENST00000528232 LMBRD1Q9NUN5 540 aa8.14□□□□□ -1.11
CTNND1-218ENST00000528232 CCDC87Q9NVE4 849 aa8.14□□□□□ -1.11
CTNND1-218ENST00000528232 ZNF219Q9P2Y4 722 aaPredicted RBP8.14□□□□□ -1.11
CTNND1-218ENST00000528232 CAMSAP1Q5T5Y3 1602 aa8.14□□□□□ -1.11
CTNND1-218ENST00000528232 NEBLO76041 1014 aa8.14□□□□□ -1.11
CTNND1-218ENST00000528232 A1BGP04217 495 aa8.14□□□□□ -1.11
CTNND1-218ENST00000528232 ERCC3P19447 782 aa8.14□□□□□ -1.11
CTNND1-218ENST00000528232 IBSPP21815 317 aaPredicted RBP8.14□□□□□ -1.11
CTNND1-218ENST00000528232 GNA11P29992 359 aa8.14□□□□□ -1.11
CTNND1-218ENST00000528232 STAP2Q9UGK3 403 aa8.14□□□□□ -1.11
CTNND1-218ENST00000528232 HDAC9Q9UKV0 1011 aa8.14□□□□□ -1.11
CTNND1-218ENST00000528232 LMTK2Q8IWU2 1503 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms