RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 PPP6R2O75170 966 aa16.81■□□□□ 0.28
CAPN1-214ENST00000528165 RABL6Q3YEC7 729 aaPredicted RBP16.81■□□□□ 0.28
CAPN1-214ENST00000528165 CCDC102BQ68D86 513 aa16.81■□□□□ 0.28
CAPN1-214ENST00000528165 CNNM3Q8NE01 707 aa16.81■□□□□ 0.28
CAPN1-214ENST00000528165 HPS5Q9UPZ3 1129 aa16.81■□□□□ 0.28
CAPN1-214ENST00000528165 EIF3JO75822 258 aaKnown RBP16.81■□□□□ 0.28
CAPN1-214ENST00000528165 SRGAP1Q7Z6B7 1085 aa16.81■□□□□ 0.28
CAPN1-214ENST00000528165 TICAM2Q86XR7 235 aa16.81■□□□□ 0.28
CAPN1-214ENST00000528165 GOLGA6L1Q8N7Z2 621 aa16.81■□□□□ 0.28
CAPN1-214ENST00000528165 HNRNPLLQ8WVV9 542 aaKnown RBP16.81■□□□□ 0.28
CAPN1-214ENST00000528165 ATG3Q9NT62 314 aa16.81■□□□□ 0.28
CAPN1-214ENST00000528165 POTEB2H3BUK9 544 aa16.8■□□□□ 0.28
CAPN1-214ENST00000528165 CCDC175P0C221 793 aa16.8■□□□□ 0.28
CAPN1-214ENST00000528165 HAND2P61296 217 aa16.8■□□□□ 0.28
CAPN1-214ENST00000528165 NOM1Q5C9Z4 860 aaKnown RBP16.8■□□□□ 0.28
CAPN1-214ENST00000528165 METTL16Q86W50 562 aaKnown RBP16.8■□□□□ 0.28
CAPN1-214ENST00000528165 PCDHA5Q9Y5H7 936 aa16.8■□□□□ 0.28
CAPN1-214ENST00000528165 ERLIN1O75477 346 aa16.8■□□□□ 0.28
CAPN1-214ENST00000528165 IMMTQ16891 758 aaKnown RBP16.8■□□□□ 0.28
CAPN1-214ENST00000528165 ANKRD13DQ6ZTN6 518 aa16.8■□□□□ 0.28
CAPN1-214ENST00000528165 PDE4BQ07343 736 aa16.79■□□□□ 0.28
CAPN1-214ENST00000528165 RESP18Q5W5W9 173 aa16.79■□□□□ 0.28
CAPN1-214ENST00000528165 CEP112Q8N8E3 955 aa16.79■□□□□ 0.28
CAPN1-214ENST00000528165 ZFP91Q96JP5 570 aaPredicted RBP16.79■□□□□ 0.28
CAPN1-214ENST00000528165 TBX22Q9Y458 520 aa16.79■□□□□ 0.28
CAPN1-214ENST00000528165 CUTAO60888 179 aa16.79■□□□□ 0.28
CAPN1-214ENST00000528165 LONRF3Q496Y0 759 aa16.79■□□□□ 0.28
CAPN1-214ENST00000528165 BEND6Q5SZJ8 279 aaPredicted RBP16.79■□□□□ 0.28
CAPN1-214ENST00000528165 PUF60Q9UHX1 559 aaKnown RBP16.79■□□□□ 0.28
CAPN1-214ENST00000528165 TAOK2Q9UL54 1235 aa16.79■□□□□ 0.28
CAPN1-214ENST00000528165 M0R2C6 588 aa16.78■□□□□ 0.28
CAPN1-214ENST00000528165 CTR9Q6PD62 1173 aa16.78■□□□□ 0.28
CAPN1-214ENST00000528165 VPS37DQ86XT2 251 aa16.78■□□□□ 0.28
CAPN1-214ENST00000528165 CLIC6Q96NY7 704 aa16.78■□□□□ 0.28
CAPN1-214ENST00000528165 MRPL44Q9H9J2 332 aaKnown RBP16.78■□□□□ 0.28
CAPN1-214ENST00000528165 LZTFL1Q9NQ48 299 aa16.78■□□□□ 0.28
CAPN1-214ENST00000528165 HOOK1Q9UJC3 728 aaKnown RBP16.78■□□□□ 0.28
CAPN1-214ENST00000528165 NFE2L3Q9Y4A8 694 aa16.78■□□□□ 0.28
CAPN1-214ENST00000528165 A0A087WZG4 1122 aa16.78■□□□□ 0.28
CAPN1-214ENST00000528165 FAM237AA0A1B0GTK4 181 aa16.78■□□□□ 0.28
CAPN1-214ENST00000528165 IFIT1P09914 478 aaKnown RBP16.78■□□□□ 0.28
CAPN1-214ENST00000528165 CDC27P30260 824 aa16.78■□□□□ 0.28
CAPN1-214ENST00000528165 TIMM10P62072 90 aa16.78■□□□□ 0.28
CAPN1-214ENST00000528165 FOXP4Q8IVH2 680 aaPredicted RBP16.78■□□□□ 0.28
CAPN1-214ENST00000528165 IRX2Q9BZI1 471 aaPredicted RBP16.78■□□□□ 0.28
CAPN1-214ENST00000528165 ANKZF1Q9H8Y5 726 aa16.78■□□□□ 0.28
CAPN1-214ENST00000528165 KCNH3Q9ULD8 1083 aa16.78■□□□□ 0.28
CAPN1-214ENST00000528165 PTPAQ15257 358 aa16.78■□□□□ 0.28
CAPN1-214ENST00000528165 RALYLQ86SE5 291 aaKnown RBP16.78■□□□□ 0.28
CAPN1-214ENST00000528165 ALG1Q9BT22 464 aa16.78■□□□□ 0.28
CAPN1-214ENST00000528165 KIF5CO60282 957 aa16.77■□□□□ 0.28
CAPN1-214ENST00000528165 BMP6P22004 513 aa16.77■□□□□ 0.28
CAPN1-214ENST00000528165 USP5P45974 858 aa16.77■□□□□ 0.28
CAPN1-214ENST00000528165 NOP2P46087 812 aaKnown RBP16.77■□□□□ 0.28
CAPN1-214ENST00000528165 SLC39A6Q13433 755 aa16.77■□□□□ 0.28
CAPN1-214ENST00000528165 LMBR1LQ6UX01 489 aa16.77■□□□□ 0.28
CAPN1-214ENST00000528165 RAI14Q9P0K7 980 aa16.77■□□□□ 0.28
CAPN1-214ENST00000528165 CDC23Q9UJX2 597 aa16.77■□□□□ 0.28
CAPN1-214ENST00000528165 MTF1Q14872 753 aa16.77■□□□□ 0.27
CAPN1-214ENST00000528165 MB21D2Q8IYB1 491 aaPredicted RBP16.77■□□□□ 0.27
CAPN1-214ENST00000528165 KCNH5Q8NCM2 988 aa16.77■□□□□ 0.27
CAPN1-214ENST00000528165 NCOA7Q8NI08 942 aa16.77■□□□□ 0.27
CAPN1-214ENST00000528165 DACH1Q9UI36 760 aa16.77■□□□□ 0.27
CAPN1-214ENST00000528165 RAB21Q9UL25 225 aa16.77■□□□□ 0.27
CAPN1-214ENST00000528165 RGPD2P0DJD1 1756 aa16.76■□□□□ 0.27
CAPN1-214ENST00000528165 TUBB4BP68371 445 aa16.76■□□□□ 0.27
CAPN1-214ENST00000528165 ZNF790Q6PG37 636 aa16.76■□□□□ 0.27
CAPN1-214ENST00000528165 OSBP2Q969R2 916 aa16.76■□□□□ 0.27
CAPN1-214ENST00000528165 AIFM3Q96NN9 605 aa16.76■□□□□ 0.27
CAPN1-214ENST00000528165 PLEKHG2Q9H7P9 1386 aa16.76■□□□□ 0.27
CAPN1-214ENST00000528165 ATP5J2-PTCD1G3V325 749 aa16.76■□□□□ 0.27
CAPN1-214ENST00000528165 PTCD1O75127 700 aaKnown RBP16.76■□□□□ 0.27
CAPN1-214ENST00000528165 ZNF18P17022 549 aa16.76■□□□□ 0.27
CAPN1-214ENST00000528165 IRX3P78415 501 aaPredicted RBP16.76■□□□□ 0.27
CAPN1-214ENST00000528165 HSP90B2PQ58FF3 399 aa16.76■□□□□ 0.27
CAPN1-214ENST00000528165 MSL3Q8N5Y2 521 aaKnown RBP16.76■□□□□ 0.27
CAPN1-214ENST00000528165 MSANTD4Q8NCY6 345 aa16.76■□□□□ 0.27
CAPN1-214ENST00000528165 RGS22Q8NE09 1264 aa16.76■□□□□ 0.27
CAPN1-214ENST00000528165 PNKPQ96T60 521 aa16.76■□□□□ 0.27
CAPN1-214ENST00000528165 FAN1Q9Y2M0 1017 aa16.76■□□□□ 0.27
CAPN1-214ENST00000528165 NFAT5O94916 1531 aa16.75■□□□□ 0.27
CAPN1-214ENST00000528165 SOWAHDA6NJG2 315 aa16.75■□□□□ 0.27
CAPN1-214ENST00000528165 AKR1B15C9JRZ8 316 aaPredicted RBP16.75■□□□□ 0.27
CAPN1-214ENST00000528165 KRT40Q6A162 431 aa16.75■□□□□ 0.27
CAPN1-214ENST00000528165 NUTM2AQ8IVF1 878 aaPredicted RBP16.75■□□□□ 0.27
CAPN1-214ENST00000528165 L1RE1Q9UN81 338 aa16.75■□□□□ 0.27
CAPN1-214ENST00000528165 ANTXR2P58335 489 aa16.75■□□□□ 0.27
CAPN1-214ENST00000528165 TUBB2AQ13885 445 aa16.75■□□□□ 0.27
CAPN1-214ENST00000528165 WASHC4Q2M389 1173 aa16.75■□□□□ 0.27
CAPN1-214ENST00000528165 ENOX1Q8TC92 643 aaKnown RBP16.75■□□□□ 0.27
CAPN1-214ENST00000528165 PANX2Q96RD6 677 aa16.75■□□□□ 0.27
CAPN1-214ENST00000528165 MAP3K14Q99558 947 aa16.75■□□□□ 0.27
CAPN1-214ENST00000528165 TUBB2BQ9BVA1 445 aa16.75■□□□□ 0.27
CAPN1-214ENST00000528165 ABCB6Q9NP58 842 aa16.75■□□□□ 0.27
CAPN1-214ENST00000528165 MAN1B1Q9UKM7 699 aa16.75■□□□□ 0.27
CAPN1-214ENST00000528165 A0A1B0GUL7 405 aa16.74■□□□□ 0.27
CAPN1-214ENST00000528165 FOXN1O15353 648 aa16.74■□□□□ 0.27
CAPN1-214ENST00000528165 N4BP1O75113 896 aaKnown RBP16.74■□□□□ 0.27
CAPN1-214ENST00000528165 RPS6KA5O75582 802 aa16.74■□□□□ 0.27
CAPN1-214ENST00000528165 FMR1Q06787 632 aaKnown RBP eCLIP16.74■□□□□ 0.272e-6■■■■□ 25.8
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms