RNA–Protein interactions for RNA: ENST00000527464.5

NR1H3-229, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best)

Gene NR1H3, Length 1,183 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-229ENST00000527464 RASAL3Q86YV0 1011 aa20.68■□□□□ 0.9
NR1H3-229ENST00000527464 CLASRPQ8N2M8 674 aaKnown RBP20.68■□□□□ 0.9
NR1H3-229ENST00000527464 HOOK2Q96ED9 719 aa20.68■□□□□ 0.9
NR1H3-229ENST00000527464 TEPSINQ96N21 525 aa20.68■□□□□ 0.9
NR1H3-229ENST00000527464 CCDC8Q9H0W5 538 aaPredicted RBP20.68■□□□□ 0.9
NR1H3-229ENST00000527464 SSC5DA1L4H1 1573 aa20.68■□□□□ 0.9
NR1H3-229ENST00000527464 LDHCP07864 332 aa20.67■□□□□ 0.9
NR1H3-229ENST00000527464 CTCFP49711 727 aaPredicted RBP20.67■□□□□ 0.9
NR1H3-229ENST00000527464 CDC42EP5Q6NZY7 148 aa20.67■□□□□ 0.9
NR1H3-229ENST00000527464 PI16Q6UXB8 463 aa20.67■□□□□ 0.9
NR1H3-229ENST00000527464 AACSQ86V21 672 aa20.67■□□□□ 0.9
NR1H3-229ENST00000527464 TMEM39BQ9GZU3 492 aa20.67■□□□□ 0.9
NR1H3-229ENST00000527464 RPAP1Q9BWH6 1393 aaPredicted RBP20.67■□□□□ 0.9
NR1H3-229ENST00000527464 FOXN1O15353 648 aa20.66■□□□□ 0.9
NR1H3-229ENST00000527464 IREB2P48200 963 aaKnown RBP20.66■□□□□ 0.9
NR1H3-229ENST00000527464 CACNB3P54284 484 aa20.66■□□□□ 0.9
NR1H3-229ENST00000527464 MECOMQ03112 1051 aa20.66■□□□□ 0.9
NR1H3-229ENST00000527464 PRKG1Q13976 671 aa20.66■□□□□ 0.9
NR1H3-229ENST00000527464 USP40Q9NVE5 1235 aa20.66■□□□□ 0.9
NR1H3-229ENST00000527464 TLR7Q9NYK1 1049 aaKnown RBP20.66■□□□□ 0.9
NR1H3-229ENST00000527464 MROH7-TTC4A0A0A0MT08 1334 aa20.65■□□□□ 0.9
NR1H3-229ENST00000527464 MAP4K4O95819 1239 aaPredicted RBP20.65■□□□□ 0.9
NR1H3-229ENST00000527464 KIF23Q02241 960 aaPredicted RBP20.65■□□□□ 0.9
NR1H3-229ENST00000527464 TBC1D9Q6ZT07 1266 aa20.65■□□□□ 0.9
NR1H3-229ENST00000527464 FAM151AQ8WW52 585 aa20.65■□□□□ 0.9
NR1H3-229ENST00000527464 NSUN4Q96CB9 384 aaKnown RBP20.65■□□□□ 0.9
NR1H3-229ENST00000527464 IL1RAPL2Q9NP60 686 aa20.65■□□□□ 0.9
NR1H3-229ENST00000527464 LRP2BPQ9P2M1 347 aa20.65■□□□□ 0.9
NR1H3-229ENST00000527464 GPR75-ASB3A0A0A6YYF3 556 aa20.64■□□□□ 0.89
NR1H3-229ENST00000527464 USP2O75604 605 aaPredicted RBP20.64■□□□□ 0.89
NR1H3-229ENST00000527464 ZIC5Q96T25 663 aa20.64■□□□□ 0.89
NR1H3-229ENST00000527464 SNRKQ9NRH2 765 aa20.64■□□□□ 0.89
NR1H3-229ENST00000527464 RAI14Q9P0K7 980 aa20.64■□□□□ 0.89
NR1H3-229ENST00000527464 ANKRD13AQ8IZ07 590 aa20.63■□□□□ 0.89
NR1H3-229ENST00000527464 SLC10A4Q96EP9 437 aa20.63■□□□□ 0.89
NR1H3-229ENST00000527464 IDI2Q9BXS1 227 aa20.63■□□□□ 0.89
NR1H3-229ENST00000527464 PRDM10Q9NQV6 1147 aa20.63■□□□□ 0.89
NR1H3-229ENST00000527464 ENTPD3O75355 529 aa20.62■□□□□ 0.89
NR1H3-229ENST00000527464 CYP2E1P05181 493 aaPredicted RBP20.62■□□□□ 0.89
NR1H3-229ENST00000527464 IFIT2P09913 472 aaKnown RBP20.62■□□□□ 0.89
NR1H3-229ENST00000527464 BTDP43251 543 aa20.62■□□□□ 0.89
NR1H3-229ENST00000527464 TMED8Q6PL24 325 aaPredicted RBP20.62■□□□□ 0.89
NR1H3-229ENST00000527464 ZNF384Q8TF68 577 aa20.62■□□□□ 0.89
NR1H3-229ENST00000527464 AK9Q5TCS8 1911 aa20.61■□□□□ 0.89
NR1H3-229ENST00000527464 APBB1O00213 710 aa20.61■□□□□ 0.89
NR1H3-229ENST00000527464 ZAP70P43403 619 aa20.61■□□□□ 0.89
NR1H3-229ENST00000527464 NFIAQ12857 509 aa20.61■□□□□ 0.89
NR1H3-229ENST00000527464 DCAF15Q66K64 600 aa20.61■□□□□ 0.89
NR1H3-229ENST00000527464 CDAN1Q8IWY9 1227 aa20.61■□□□□ 0.89
NR1H3-229ENST00000527464 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.61■□□□□ 0.89
NR1H3-229ENST00000527464 CSRNP1Q96S65 589 aa20.61■□□□□ 0.89
NR1H3-229ENST00000527464 FAM198AQ9UFP1 575 aa20.61■□□□□ 0.89
NR1H3-229ENST00000527464 FZD1Q9UP38 647 aa20.61■□□□□ 0.89
NR1H3-229ENST00000527464 NPM3O75607 178 aaKnown RBP20.6■□□□□ 0.89
NR1H3-229ENST00000527464 HSPA8P11142 646 aaKnown RBP20.6■□□□□ 0.89
NR1H3-229ENST00000527464 SPRYD7Q5W111 196 aa20.6■□□□□ 0.89
NR1H3-229ENST00000527464 NAA16Q6N069 864 aaPredicted RBP20.6■□□□□ 0.89
NR1H3-229ENST00000527464 LRRCC1Q9C099 1032 aa20.6■□□□□ 0.89
NR1H3-229ENST00000527464 DCTPP1Q9H773 170 aa20.6■□□□□ 0.89
NR1H3-229ENST00000527464 SAGE1Q9NXZ1 904 aa20.6■□□□□ 0.89
NR1H3-229ENST00000527464 RFX7Q2KHR2 1363 aa20.59■□□□□ 0.89
NR1H3-229ENST00000527464 MAST2Q6P0Q8 1798 aa20.59■□□□□ 0.89
NR1H3-229ENST00000527464 ZBTB48P10074 688 aaPredicted RBP20.59■□□□□ 0.89
NR1H3-229ENST00000527464 MAP3K9P80192 1104 aa20.59■□□□□ 0.89
NR1H3-229ENST00000527464 AAMPQ13685 434 aa20.59■□□□□ 0.89
NR1H3-229ENST00000527464 NOL10Q9BSC4 688 aaKnown RBP20.59■□□□□ 0.89
NR1H3-229ENST00000527464 BAG3O95817 575 aa20.58■□□□□ 0.89
NR1H3-229ENST00000527464 RGS3P49796 1198 aa20.58■□□□□ 0.89
NR1H3-229ENST00000527464 LBX1P52954 281 aa20.58■□□□□ 0.89
NR1H3-229ENST00000527464 RHBDL3P58872 404 aa20.58■□□□□ 0.89
NR1H3-229ENST00000527464 SREBF2Q12772 1141 aa20.58■□□□□ 0.89
NR1H3-229ENST00000527464 TCP10Q12799 353 aa20.58■□□□□ 0.89
NR1H3-229ENST00000527464 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.58■□□□□ 0.89
NR1H3-229ENST00000527464 CLMNQ96JQ2 1002 aa20.58■□□□□ 0.89
NR1H3-229ENST00000527464 MYO5AQ9Y4I1 1855 aaKnown RBP20.58■□□□□ 0.88
NR1H3-229ENST00000527464 WDHD1O75717 1129 aaPredicted RBP20.57■□□□□ 0.88
NR1H3-229ENST00000527464 PLCG2P16885 1265 aa20.57■□□□□ 0.88
NR1H3-229ENST00000527464 TM4SF4P48230 202 aa20.57■□□□□ 0.88
NR1H3-229ENST00000527464 INHBEP58166 350 aa20.57■□□□□ 0.88
NR1H3-229ENST00000527464 TTF1Q15361 905 aaPredicted RBP20.57■□□□□ 0.88
NR1H3-229ENST00000527464 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.57■□□□□ 0.88
NR1H3-229ENST00000527464 WNK4Q96J92 1243 aa20.57■□□□□ 0.88
NR1H3-229ENST00000527464 CRBNQ96SW2 442 aa20.57■□□□□ 0.88
NR1H3-229ENST00000527464 ZNF341Q9BYN7 854 aa20.57■□□□□ 0.88
NR1H3-229ENST00000527464 PIH1D3Q9NQM4 214 aaKnown RBP20.57■□□□□ 0.88
NR1H3-229ENST00000527464 PCDHB15Q9Y5E8 787 aa20.57■□□□□ 0.88
NR1H3-229ENST00000527464 CSADQ9Y600 493 aa20.57■□□□□ 0.88
NR1H3-229ENST00000527464 OTOFQ9HC10 1997 aa20.57■□□□□ 0.88
NR1H3-229ENST00000527464 MANSC4A6NHS7 340 aaPredicted RBP20.56■□□□□ 0.88
NR1H3-229ENST00000527464 PPP4CP60510 307 aa20.56■□□□□ 0.88
NR1H3-229ENST00000527464 MAP3K12Q12852 859 aa20.56■□□□□ 0.88
NR1H3-229ENST00000527464 COL13A1Q5TAT6 717 aaPredicted RBP20.56■□□□□ 0.88
NR1H3-229ENST00000527464 CERS3Q8IU89 383 aa20.55■□□□□ 0.88
NR1H3-229ENST00000527464 RNF186Q9NXI6 227 aa20.55■□□□□ 0.88
NR1H3-229ENST00000527464 LAMB1P07942 1786 aa20.54■□□□□ 0.88
NR1H3-229ENST00000527464 IDH1O75874 414 aaKnown RBP20.54■□□□□ 0.88
NR1H3-229ENST00000527464 ATP5JP18859 108 aa20.54■□□□□ 0.88
NR1H3-229ENST00000527464 VGLL4Q14135 290 aa20.54■□□□□ 0.88
NR1H3-229ENST00000527464 ZFPM1Q8IX07 1006 aa20.54■□□□□ 0.88
NR1H3-229ENST00000527464 WRNIP1Q96S55 665 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms