RNA–Protein interactions for RNA: ENST00000527243.5

CTSB-214, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-214ENST00000527243 RGMBQ6NW40 437 aa13.72□□□□□ -0.21
CTSB-214ENST00000527243 DZIP1Q86YF9 867 aaKnown RBP13.72□□□□□ -0.21
CTSB-214ENST00000527243 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.72□□□□□ -0.21
CTSB-214ENST00000527243 LRRCC1Q9C099 1032 aa13.72□□□□□ -0.21
CTSB-214ENST00000527243 TMEM39BQ9GZU3 492 aa13.72□□□□□ -0.21
CTSB-214ENST00000527243 PIH1D3Q9NQM4 214 aaKnown RBP13.72□□□□□ -0.21
CTSB-214ENST00000527243 RPAP1Q9BWH6 1393 aaPredicted RBP13.71□□□□□ -0.21
CTSB-214ENST00000527243 UBE2Q2LH0YL09 131 aa13.71□□□□□ -0.21
CTSB-214ENST00000527243 NF2P35240 595 aa13.71□□□□□ -0.21
CTSB-214ENST00000527243 RHBDL3P58872 404 aa13.71□□□□□ -0.21
CTSB-214ENST00000527243 NFIAQ12857 509 aa13.71□□□□□ -0.21
CTSB-214ENST00000527243 SUPT20HL1Q3ZLR7 823 aa13.71□□□□□ -0.21
CTSB-214ENST00000527243 SLF2Q8IX21 1173 aa13.71□□□□□ -0.21
CTSB-214ENST00000527243 IDI2Q9BXS1 227 aa13.71□□□□□ -0.21
CTSB-214ENST00000527243 PPP4R2Q9NY27 417 aa13.71□□□□□ -0.21
CTSB-214ENST00000527243 FAM198AQ9UFP1 575 aa13.71□□□□□ -0.21
CTSB-214ENST00000527243 SMARCA5O60264 1052 aaPredicted RBP13.7□□□□□ -0.22
CTSB-214ENST00000527243 AOC2O75106 756 aa13.7□□□□□ -0.22
CTSB-214ENST00000527243 WDHD1O75717 1129 aaPredicted RBP13.7□□□□□ -0.22
CTSB-214ENST00000527243 SLC10A3P09131 477 aa13.7□□□□□ -0.22
CTSB-214ENST00000527243 IFIT2P09913 472 aaKnown RBP13.7□□□□□ -0.22
CTSB-214ENST00000527243 MAP2K2P36507 400 aa13.7□□□□□ -0.22
CTSB-214ENST00000527243 TNNI2P48788 182 aa13.7□□□□□ -0.22
CTSB-214ENST00000527243 HDAC1Q13547 482 aaPredicted RBP13.7□□□□□ -0.22
CTSB-214ENST00000527243 ZIC5Q96T25 663 aa13.7□□□□□ -0.22
CTSB-214ENST00000527243 USP40Q9NVE5 1235 aa13.7□□□□□ -0.22
CTSB-214ENST00000527243 WBP1LQ9NX94 342 aa13.7□□□□□ -0.22
CTSB-214ENST00000527243 TMOD2Q9NZR1 351 aa13.7□□□□□ -0.22
CTSB-214ENST00000527243 LRP2BPQ9P2M1 347 aa13.7□□□□□ -0.22
CTSB-214ENST00000527243 FZD1Q9UP38 647 aa13.7□□□□□ -0.22
CTSB-214ENST00000527243 NDUFB9Q9Y6M9 179 aa13.7□□□□□ -0.22
CTSB-214ENST00000527243 UNCXA6NJT0 531 aa13.69□□□□□ -0.22
CTSB-214ENST00000527243 USP2O75604 605 aaPredicted RBP13.69□□□□□ -0.22
CTSB-214ENST00000527243 MAP4K4O95819 1239 aaPredicted RBP13.69□□□□□ -0.22
CTSB-214ENST00000527243 LDHCP07864 332 aa13.69□□□□□ -0.22
CTSB-214ENST00000527243 BTDP43251 543 aa13.69□□□□□ -0.22
CTSB-214ENST00000527243 GSTO1P78417 241 aa13.69□□□□□ -0.22
CTSB-214ENST00000527243 NOGQ13253 232 aa13.69□□□□□ -0.22
CTSB-214ENST00000527243 ARMC9Q7Z3E5 817 aa13.69□□□□□ -0.22
CTSB-214ENST00000527243 RASAL3Q86YV0 1011 aa13.69□□□□□ -0.22
CTSB-214ENST00000527243 EXOC6Q8TAG9 804 aa13.69□□□□□ -0.22
CTSB-214ENST00000527243 FAM151AQ8WW52 585 aa13.69□□□□□ -0.22
CTSB-214ENST00000527243 CCDC102AQ96A19 550 aa13.69□□□□□ -0.22
CTSB-214ENST00000527243 ANTXR1Q9H6X2 564 aa13.69□□□□□ -0.22
CTSB-214ENST00000527243 RAI14Q9P0K7 980 aa13.69□□□□□ -0.22
CTSB-214ENST00000527243 MYH2Q9UKX2 1941 aa13.68□□□□□ -0.22
CTSB-214ENST00000527243 ENTPD3O75355 529 aa13.68□□□□□ -0.22
CTSB-214ENST00000527243 NPM3O75607 178 aaKnown RBP13.68□□□□□ -0.22
CTSB-214ENST00000527243 HSPA1AP0DMV8 641 aaKnown RBP13.68□□□□□ -0.22
CTSB-214ENST00000527243 HSPA1BP0DMV9 641 aaKnown RBP13.68□□□□□ -0.22
CTSB-214ENST00000527243 ATP5JP18859 108 aa13.68□□□□□ -0.22
CTSB-214ENST00000527243 ZNF157P51786 506 aaPredicted RBP13.68□□□□□ -0.22
CTSB-214ENST00000527243 PPP4CP60510 307 aa13.68□□□□□ -0.22
CTSB-214ENST00000527243 ADGRA1Q86SQ6 560 aa13.68□□□□□ -0.22
CTSB-214ENST00000527243 ZFPM1Q8IX07 1006 aa13.68□□□□□ -0.22
CTSB-214ENST00000527243 DDX4Q9NQI0 724 aaKnown RBP13.68□□□□□ -0.22
CTSB-214ENST00000527243 ANGEL1Q9UNK9 670 aaKnown RBP13.68□□□□□ -0.22
CTSB-214ENST00000527243 ATRNL1Q5VV63 1379 aa13.68□□□□□ -0.22
CTSB-214ENST00000527243 PPP1R12BO60237 982 aaPredicted RBP13.67□□□□□ -0.22
CTSB-214ENST00000527243 RGS3P49796 1198 aa13.67□□□□□ -0.22
CTSB-214ENST00000527243 PRKG1Q13976 671 aa13.67□□□□□ -0.22
CTSB-214ENST00000527243 NAA16Q6N069 864 aaPredicted RBP13.67□□□□□ -0.22
CTSB-214ENST00000527243 TMED8Q6PL24 325 aaPredicted RBP13.67□□□□□ -0.22
CTSB-214ENST00000527243 PAXIP1Q6ZW49 1069 aaPredicted RBP13.67□□□□□ -0.22
CTSB-214ENST00000527243 SH3BP5LQ7L8J4 393 aa13.67□□□□□ -0.22
CTSB-214ENST00000527243 MAST2Q6P0Q8 1798 aa13.66□□□□□ -0.22
CTSB-214ENST00000527243 MAP2K1Q02750 393 aaPredicted RBP13.66□□□□□ -0.22
CTSB-214ENST00000527243 MAP3K10Q02779 954 aa13.66□□□□□ -0.22
CTSB-214ENST00000527243 GRM1Q13255 1194 aa13.66□□□□□ -0.22
CTSB-214ENST00000527243 TTLL12Q14166 644 aaPredicted RBP13.66□□□□□ -0.22
CTSB-214ENST00000527243 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.66□□□□□ -0.22
CTSB-214ENST00000527243 CLMNQ96JQ2 1002 aa13.66□□□□□ -0.22
CTSB-214ENST00000527243 HAUS7Q99871 368 aa13.66□□□□□ -0.22
CTSB-214ENST00000527243 SALL3Q9BXA9 1300 aa13.65□□□□□ -0.22
CTSB-214ENST00000527243 IDH1O75874 414 aaKnown RBP13.65□□□□□ -0.22
CTSB-214ENST00000527243 IREB2P48200 963 aaKnown RBP13.65□□□□□ -0.22
CTSB-214ENST00000527243 TCP10Q12799 353 aa13.65□□□□□ -0.22
CTSB-214ENST00000527243 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.65□□□□□ -0.22
CTSB-214ENST00000527243 EDC3Q96F86 508 aaKnown RBP13.65□□□□□ -0.22
CTSB-214ENST00000527243 BOLA2Q9H3K6 86 aa13.65□□□□□ -0.22
CTSB-214ENST00000527243 ZNF112Q9UJU3 913 aa13.65□□□□□ -0.22
CTSB-214ENST00000527243 COL2A1P02458 1487 aaPredicted RBP13.65□□□□□ -0.22
CTSB-214ENST00000527243 DOCK2Q92608 1830 aa13.64□□□□□ -0.23
CTSB-214ENST00000527243 MYO5AQ9Y4I1 1855 aaKnown RBP13.64□□□□□ -0.23
CTSB-214ENST00000527243 DDTLA6NHG4 134 aaPredicted RBP13.64□□□□□ -0.23
CTSB-214ENST00000527243 GOLIM4O00461 696 aa13.64□□□□□ -0.23
CTSB-214ENST00000527243 FOXN1O15353 648 aa13.64□□□□□ -0.23
CTSB-214ENST00000527243 CYP7A1P22680 504 aa13.64□□□□□ -0.23
CTSB-214ENST00000527243 KIF23Q02241 960 aaPredicted RBP13.64□□□□□ -0.23
CTSB-214ENST00000527243 MAP3K12Q12852 859 aa13.64□□□□□ -0.23
CTSB-214ENST00000527243 TTF1Q15361 905 aaPredicted RBP13.64□□□□□ -0.23
CTSB-214ENST00000527243 SPRYD7Q5W111 196 aa13.64□□□□□ -0.23
CTSB-214ENST00000527243 SMC5Q8IY18 1101 aa13.64□□□□□ -0.23
CTSB-214ENST00000527243 ANKRD13AQ8IZ07 590 aa13.64□□□□□ -0.23
CTSB-214ENST00000527243 OTUD7AQ8TE49 926 aaPredicted RBP13.64□□□□□ -0.23
CTSB-214ENST00000527243 SH3RF3Q8TEJ3 882 aaPredicted RBP13.64□□□□□ -0.23
CTSB-214ENST00000527243 GCC1Q96CN9 775 aa13.64□□□□□ -0.23
CTSB-214ENST00000527243 ECHDC1Q9NTX5 307 aa13.64□□□□□ -0.23
CTSB-214ENST00000527243 TCRBV5S4A2TA0A5A2 114 aa13.63□□□□□ -0.23
CTSB-214ENST00000527243 BAG3O95817 575 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms