RNA–Protein interactions for RNA: ENST00000527215.6

CTSB-213, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-213ENST00000527215 CDC42EP5Q6NZY7 148 aa19.84■□□□□ 0.77
CTSB-213ENST00000527215 FAM83AQ86UY5 434 aa19.84■□□□□ 0.77
CTSB-213ENST00000527215 GPR108Q9NPR9 543 aa19.84■□□□□ 0.77
CTSB-213ENST00000527215 HMG20BQ9P0W2 317 aa19.84■□□□□ 0.77
CTSB-213ENST00000527215 NOP58Q9Y2X3 529 aaKnown RBP19.84■□□□□ 0.77
CTSB-213ENST00000527215 FPGT-TNNI3KV9GXZ4 949 aa19.84■□□□□ 0.77
CTSB-213ENST00000527215 UNCXA6NJT0 531 aa19.83■□□□□ 0.77
CTSB-213ENST00000527215 ARID4AP29374 1257 aaPredicted RBP19.83■□□□□ 0.77
CTSB-213ENST00000527215 PI16Q6UXB8 463 aa19.83■□□□□ 0.77
CTSB-213ENST00000527215 DZIP1Q86YF9 867 aaKnown RBP19.83■□□□□ 0.77
CTSB-213ENST00000527215 ANKRD13AQ8IZ07 590 aa19.83■□□□□ 0.77
CTSB-213ENST00000527215 WNK4Q96J92 1243 aa19.83■□□□□ 0.77
CTSB-213ENST00000527215 COG6Q9Y2V7 657 aa19.83■□□□□ 0.77
CTSB-213ENST00000527215 RPAP1Q9BWH6 1393 aaPredicted RBP19.83■□□□□ 0.76
CTSB-213ENST00000527215 CDK5RAP2Q96SN8 1893 aa19.82■□□□□ 0.76
CTSB-213ENST00000527215 TM4SF4P48230 202 aa19.82■□□□□ 0.76
CTSB-213ENST00000527215 SPTY2D1Q68D10 685 aaPredicted RBP19.82■□□□□ 0.76
CTSB-213ENST00000527215 SPATA5Q8NB90 893 aa19.82■□□□□ 0.76
CTSB-213ENST00000527215 DDX19BQ9UMR2 479 aa19.82■□□□□ 0.76
CTSB-213ENST00000527215 GAKO14976 1311 aa19.81■□□□□ 0.76
CTSB-213ENST00000527215 UQCRFS1P1P0C7P4 283 aa19.81■□□□□ 0.76
CTSB-213ENST00000527215 MCAMP43121 646 aa19.81■□□□□ 0.76
CTSB-213ENST00000527215 MLLT1Q03111 559 aaPredicted RBP19.81■□□□□ 0.76
CTSB-213ENST00000527215 SREBF2Q12772 1141 aa19.81■□□□□ 0.76
CTSB-213ENST00000527215 ERICH6Q7L0X2 663 aa19.81■□□□□ 0.76
CTSB-213ENST00000527215 DBNDD2Q9BQY9 259 aa19.81■□□□□ 0.76
CTSB-213ENST00000527215 USP40Q9NVE5 1235 aa19.81■□□□□ 0.76
CTSB-213ENST00000527215 ZBTB48P10074 688 aaPredicted RBP19.8■□□□□ 0.76
CTSB-213ENST00000527215 NFIAQ12857 509 aa19.8■□□□□ 0.76
CTSB-213ENST00000527215 ELP3Q9H9T3 547 aa19.8■□□□□ 0.76
CTSB-213ENST00000527215 MECOMQ03112 1051 aa19.79■□□□□ 0.76
CTSB-213ENST00000527215 TCP10Q12799 353 aa19.79■□□□□ 0.76
CTSB-213ENST00000527215 TTC39AQ5SRH9 613 aa19.79■□□□□ 0.76
CTSB-213ENST00000527215 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.79■□□□□ 0.76
CTSB-213ENST00000527215 TBC1D9Q6ZT07 1266 aa19.79■□□□□ 0.76
CTSB-213ENST00000527215 SLF2Q8IX21 1173 aa19.79■□□□□ 0.76
CTSB-213ENST00000527215 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.79■□□□□ 0.76
CTSB-213ENST00000527215 FAM151AQ8WW52 585 aa19.79■□□□□ 0.76
CTSB-213ENST00000527215 EXOC6BQ9Y2D4 811 aa19.79■□□□□ 0.76
CTSB-213ENST00000527215 FOCADQ5VW36 1801 aa19.79■□□□□ 0.76
CTSB-213ENST00000527215 MROH7-TTC4A0A0A0MT08 1334 aa19.78■□□□□ 0.76
CTSB-213ENST00000527215 MANSC4A6NHS7 340 aaPredicted RBP19.78■□□□□ 0.76
CTSB-213ENST00000527215 GJA5P36382 358 aa19.78■□□□□ 0.76
CTSB-213ENST00000527215 RGS19P49795 217 aa19.78■□□□□ 0.76
CTSB-213ENST00000527215 CCDC158Q5M9N0 1113 aa19.78■□□□□ 0.76
CTSB-213ENST00000527215 HOOK2Q96ED9 719 aa19.78■□□□□ 0.76
CTSB-213ENST00000527215 ZBTB40Q9NUA8 1239 aa19.78■□□□□ 0.76
CTSB-213ENST00000527215 FAM198AQ9UFP1 575 aa19.78■□□□□ 0.76
CTSB-213ENST00000527215 MAP3K9P80192 1104 aa19.77■□□□□ 0.76
CTSB-213ENST00000527215 VGLL4Q14135 290 aa19.77■□□□□ 0.76
CTSB-213ENST00000527215 C20orf194Q5TEA3 1177 aa19.77■□□□□ 0.76
CTSB-213ENST00000527215 ZNF384Q8TF68 577 aa19.77■□□□□ 0.76
CTSB-213ENST00000527215 EAF2Q96CJ1 260 aaPredicted RBP19.77■□□□□ 0.76
CTSB-213ENST00000527215 OPTNQ96CV9 577 aa19.77■□□□□ 0.76
CTSB-213ENST00000527215 FAM163AQ96GL9 167 aaPredicted RBP19.77■□□□□ 0.76
CTSB-213ENST00000527215 CCDC8Q9H0W5 538 aaPredicted RBP19.77■□□□□ 0.76
CTSB-213ENST00000527215 SNRKQ9NRH2 765 aa19.77■□□□□ 0.76
CTSB-213ENST00000527215 TLR7Q9NYK1 1049 aaKnown RBP19.77■□□□□ 0.76
CTSB-213ENST00000527215 DBNLQ9UJU6 430 aaKnown RBP19.77■□□□□ 0.76
CTSB-213ENST00000527215 CSADQ9Y600 493 aa19.77■□□□□ 0.76
CTSB-213ENST00000527215 RFX7Q2KHR2 1363 aa19.76■□□□□ 0.75
CTSB-213ENST00000527215 TBC1D8O95759 1140 aa19.76■□□□□ 0.75
CTSB-213ENST00000527215 BTDP43251 543 aa19.76■□□□□ 0.75
CTSB-213ENST00000527215 DCAF15Q66K64 600 aa19.76■□□□□ 0.75
CTSB-213ENST00000527215 MIGA2Q7L4E1 593 aa19.76■□□□□ 0.75
CTSB-213ENST00000527215 CTU1Q7Z7A3 348 aaKnown RBP19.76■□□□□ 0.75
CTSB-213ENST00000527215 RPAP2Q8IXW5 612 aaPredicted RBP19.76■□□□□ 0.75
CTSB-213ENST00000527215 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.76■□□□□ 0.75
CTSB-213ENST00000527215 NSUN4Q96CB9 384 aaKnown RBP19.76■□□□□ 0.75
CTSB-213ENST00000527215 RAI14Q9P0K7 980 aa19.76■□□□□ 0.75
CTSB-213ENST00000527215 RGS3P49796 1198 aa19.75■□□□□ 0.75
CTSB-213ENST00000527215 INHBEP58166 350 aa19.75■□□□□ 0.75
CTSB-213ENST00000527215 PDE3AQ14432 1141 aa19.75■□□□□ 0.75
CTSB-213ENST00000527215 ERC1Q8IUD2 1116 aa19.75■□□□□ 0.75
CTSB-213ENST00000527215 ZFPM1Q8IX07 1006 aa19.75■□□□□ 0.75
CTSB-213ENST00000527215 CNKSR2Q8WXI2 1034 aa19.75■□□□□ 0.75
CTSB-213ENST00000527215 WRNIP1Q96S55 665 aa19.75■□□□□ 0.75
CTSB-213ENST00000527215 IDI2Q9BXS1 227 aa19.75■□□□□ 0.75
CTSB-213ENST00000527215 CHMP4BQ9H444 224 aaKnown RBP19.75■□□□□ 0.75
CTSB-213ENST00000527215 LRP2BPQ9P2M1 347 aa19.75■□□□□ 0.75
CTSB-213ENST00000527215 DOCK1Q14185 1865 aa19.74■□□□□ 0.75
CTSB-213ENST00000527215 GPR75-ASB3A0A0A6YYF3 556 aa19.74■□□□□ 0.75
CTSB-213ENST00000527215 GSTO1P78417 241 aa19.74■□□□□ 0.75
CTSB-213ENST00000527215 IFNL1Q8IU54 200 aa19.74■□□□□ 0.75
CTSB-213ENST00000527215 SIRT2Q8IXJ6 389 aa19.74■□□□□ 0.75
CTSB-213ENST00000527215 ZKSCAN4Q969J2 545 aaPredicted RBP19.74■□□□□ 0.75
CTSB-213ENST00000527215 ZNF512BQ96KM6 892 aaPredicted RBP19.74■□□□□ 0.75
CTSB-213ENST00000527215 ZNF341Q9BYN7 854 aa19.74■□□□□ 0.75
CTSB-213ENST00000527215 SNCAIPQ9Y6H5 919 aa19.74■□□□□ 0.75
CTSB-213ENST00000527215 ATAD5Q96QE3 1844 aa19.74■□□□□ 0.75
CTSB-213ENST00000527215 IGF2BP3O00425 579 aaKnown RBP eCLIP19.73■□□□□ 0.75
CTSB-213ENST00000527215 HMMRO75330 724 aa19.73■□□□□ 0.75
CTSB-213ENST00000527215 ENTPD3O75355 529 aa19.73■□□□□ 0.75
CTSB-213ENST00000527215 LDHCP07864 332 aa19.73■□□□□ 0.75
CTSB-213ENST00000527215 HSP90AB4PQ58FF6 505 aa19.73■□□□□ 0.75
CTSB-213ENST00000527215 OTUD5Q96G74 571 aa19.73■□□□□ 0.75
CTSB-213ENST00000527215 WDHD1O75717 1129 aaPredicted RBP19.72■□□□□ 0.75
CTSB-213ENST00000527215 ALDH1A1P00352 501 aa19.72■□□□□ 0.75
CTSB-213ENST00000527215 CYP2E1P05181 493 aaPredicted RBP19.72■□□□□ 0.75
CTSB-213ENST00000527215 ZAP70P43403 619 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms