RNA–Protein interactions for RNA: ENST00000527064.1

NXF1-204, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-204ENST00000527064 GRM1Q13255 1194 aa17.57■□□□□ 0.4
NXF1-204ENST00000527064 CDC42EP5Q6NZY7 148 aa17.57■□□□□ 0.4
NXF1-204ENST00000527064 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.57■□□□□ 0.4
NXF1-204ENST00000527064 CCDC102AQ96A19 550 aa17.57■□□□□ 0.4
NXF1-204ENST00000527064 NSUN4Q96CB9 384 aaKnown RBP17.57■□□□□ 0.4
NXF1-204ENST00000527064 HOOK2Q96ED9 719 aa17.57■□□□□ 0.4
NXF1-204ENST00000527064 BCL11AQ9H165 835 aa17.57■□□□□ 0.4
NXF1-204ENST00000527064 SUPT16HQ9Y5B9 1047 aaKnown RBP17.57■□□□□ 0.4
NXF1-204ENST00000527064 BTDP43251 543 aa17.56■□□□□ 0.4
NXF1-204ENST00000527064 ZNF157P51786 506 aaPredicted RBP17.56■□□□□ 0.4
NXF1-204ENST00000527064 CACNB3P54284 484 aa17.56■□□□□ 0.4
NXF1-204ENST00000527064 NOL10Q9BSC4 688 aaKnown RBP17.56■□□□□ 0.4
NXF1-204ENST00000527064 TMEM39BQ9GZU3 492 aa17.56■□□□□ 0.4
NXF1-204ENST00000527064 USP40Q9NVE5 1235 aa17.56■□□□□ 0.4
NXF1-204ENST00000527064 SSC5DA1L4H1 1573 aa17.56■□□□□ 0.4
NXF1-204ENST00000527064 MAP4K4O95819 1239 aaPredicted RBP17.55■□□□□ 0.4
NXF1-204ENST00000527064 MAP2K2P36507 400 aa17.55■□□□□ 0.4
NXF1-204ENST00000527064 IREB2P48200 963 aaKnown RBP17.55■□□□□ 0.4
NXF1-204ENST00000527064 NOGQ13253 232 aa17.55■□□□□ 0.4
NXF1-204ENST00000527064 TTF1Q15361 905 aaPredicted RBP17.55■□□□□ 0.4
NXF1-204ENST00000527064 NBPF12Q5TAG4 269 aaPredicted RBP17.55■□□□□ 0.4
NXF1-204ENST00000527064 NAA16Q6N069 864 aaPredicted RBP17.55■□□□□ 0.4
NXF1-204ENST00000527064 TMED8Q6PL24 325 aaPredicted RBP17.55■□□□□ 0.4
NXF1-204ENST00000527064 TEPSINQ96N21 525 aa17.55■□□□□ 0.4
NXF1-204ENST00000527064 GPR75-ASB3A0A0A6YYF3 556 aa17.54■□□□□ 0.4
NXF1-204ENST00000527064 UNCXA6NJT0 531 aa17.54■□□□□ 0.4
NXF1-204ENST00000527064 MAP2K1Q02750 393 aaPredicted RBP17.54■□□□□ 0.4
NXF1-204ENST00000527064 HDAC1Q13547 482 aaPredicted RBP17.54■□□□□ 0.4
NXF1-204ENST00000527064 PRKG1Q13976 671 aa17.54■□□□□ 0.4
NXF1-204ENST00000527064 MAP3K11Q16584 847 aa17.54■□□□□ 0.4
NXF1-204ENST00000527064 GPATCH3Q96I76 525 aa17.54■□□□□ 0.4
NXF1-204ENST00000527064 ANGEL1Q9UNK9 670 aaKnown RBP17.54■□□□□ 0.4
NXF1-204ENST00000527064 UBE2Q2LH0YL09 131 aa17.53■□□□□ 0.4
NXF1-204ENST00000527064 SMARCA5O60264 1052 aaPredicted RBP17.53■□□□□ 0.4
NXF1-204ENST00000527064 IDH1O75874 414 aaKnown RBP17.53■□□□□ 0.4
NXF1-204ENST00000527064 SLC10A3P09131 477 aa17.53■□□□□ 0.4
NXF1-204ENST00000527064 MAP3K12Q12852 859 aa17.53■□□□□ 0.4
NXF1-204ENST00000527064 MOB2Q70IA6 237 aa17.53■□□□□ 0.4
NXF1-204ENST00000527064 ZNF384Q8TF68 577 aa17.53■□□□□ 0.4
NXF1-204ENST00000527064 FAM151AQ8WW52 585 aa17.53■□□□□ 0.4
NXF1-204ENST00000527064 IDI2Q9BXS1 227 aa17.53■□□□□ 0.4
NXF1-204ENST00000527064 PIH1D3Q9NQM4 214 aaKnown RBP17.53■□□□□ 0.4
NXF1-204ENST00000527064 ZBTB47Q9UFB7 747 aaPredicted RBP17.53■□□□□ 0.4
NXF1-204ENST00000527064 RFX7Q2KHR2 1363 aa17.53■□□□□ 0.4
NXF1-204ENST00000527064 BAG3O95817 575 aa17.52■□□□□ 0.4
NXF1-204ENST00000527064 PLCG2P16885 1265 aa17.52■□□□□ 0.4
NXF1-204ENST00000527064 ATP5JP18859 108 aa17.52■□□□□ 0.4
NXF1-204ENST00000527064 RASAL3Q86YV0 1011 aa17.52■□□□□ 0.4
NXF1-204ENST00000527064 AIDAQ96BJ3 306 aa17.52■□□□□ 0.4
NXF1-204ENST00000527064 GCC1Q96CN9 775 aa17.52■□□□□ 0.4
NXF1-204ENST00000527064 DNAJC2Q99543 621 aaKnown RBP17.52■□□□□ 0.4
NXF1-204ENST00000527064 DOCK2Q92608 1830 aa17.51■□□□□ 0.39
NXF1-204ENST00000527064 PCNTO95613 3336 aa17.51■□□□□ 0.39
NXF1-204ENST00000527064 FAM155AB1AL88 458 aaPredicted RBP17.51■□□□□ 0.39
NXF1-204ENST00000527064 AOC2O75106 756 aa17.51■□□□□ 0.39
NXF1-204ENST00000527064 ENTPD3O75355 529 aa17.51■□□□□ 0.39
NXF1-204ENST00000527064 HSPA1AP0DMV8 641 aaKnown RBP17.51■□□□□ 0.39
NXF1-204ENST00000527064 HSPA1BP0DMV9 641 aaKnown RBP17.51■□□□□ 0.39
NXF1-204ENST00000527064 TCP10Q12799 353 aa17.51■□□□□ 0.39
NXF1-204ENST00000527064 NFIAQ12857 509 aa17.51■□□□□ 0.39
NXF1-204ENST00000527064 LDLRAD1Q5T700 205 aa17.51■□□□□ 0.39
NXF1-204ENST00000527064 DCAF15Q66K64 600 aa17.51■□□□□ 0.39
NXF1-204ENST00000527064 CERS3Q8IU89 383 aa17.51■□□□□ 0.39
NXF1-204ENST00000527064 EXOC6Q8TAG9 804 aa17.51■□□□□ 0.39
NXF1-204ENST00000527064 BEGAINQ9BUH8 593 aa17.51■□□□□ 0.39
NXF1-204ENST00000527064 FAM198AQ9UFP1 575 aa17.51■□□□□ 0.39
NXF1-204ENST00000527064 NDUFB9Q9Y6M9 179 aa17.51■□□□□ 0.39
NXF1-204ENST00000527064 RGS3P49796 1198 aa17.5■□□□□ 0.39
NXF1-204ENST00000527064 CDAN1Q8IWY9 1227 aa17.5■□□□□ 0.39
NXF1-204ENST00000527064 REM2Q8IYK8 340 aaPredicted RBP17.5■□□□□ 0.39
NXF1-204ENST00000527064 ANKRD13AQ8IZ07 590 aa17.5■□□□□ 0.39
NXF1-204ENST00000527064 RWDD1Q9H446 243 aaPredicted RBP17.5■□□□□ 0.39
NXF1-204ENST00000527064 ECHDC1Q9NTX5 307 aa17.5■□□□□ 0.39
NXF1-204ENST00000527064 GOLIM4O00461 696 aa17.49■□□□□ 0.39
NXF1-204ENST00000527064 NPM3O75607 178 aaKnown RBP17.49■□□□□ 0.39
NXF1-204ENST00000527064 WDHD1O75717 1129 aaPredicted RBP17.49■□□□□ 0.39
NXF1-204ENST00000527064 RHBDL3P58872 404 aa17.49■□□□□ 0.39
NXF1-204ENST00000527064 HAUS7Q99871 368 aa17.49■□□□□ 0.39
NXF1-204ENST00000527064 BOLA2Q9H3K6 86 aa17.49■□□□□ 0.39
NXF1-204ENST00000527064 ANTXR1Q9H6X2 564 aa17.49■□□□□ 0.39
NXF1-204ENST00000527064 PAG1Q9NWQ8 432 aa17.49■□□□□ 0.39
NXF1-204ENST00000527064 WBP1LQ9NX94 342 aa17.49■□□□□ 0.39
NXF1-204ENST00000527064 AATFQ9NY61 560 aaKnown RBP eCLIP17.49■□□□□ 0.39
NXF1-204ENST00000527064 FZD1Q9UP38 647 aa17.49■□□□□ 0.39
NXF1-204ENST00000527064 USP2O75604 605 aaPredicted RBP17.48■□□□□ 0.39
NXF1-204ENST00000527064 CYP7A1P22680 504 aa17.48■□□□□ 0.39
NXF1-204ENST00000527064 PPP4CP60510 307 aa17.48■□□□□ 0.39
NXF1-204ENST00000527064 PICALMQ13492 652 aa17.48■□□□□ 0.39
NXF1-204ENST00000527064 TEX11Q8IYF3 940 aa17.48■□□□□ 0.39
NXF1-204ENST00000527064 MAGEB6Q8N7X4 407 aa17.48■□□□□ 0.39
NXF1-204ENST00000527064 SLC10A4Q96EP9 437 aa17.48■□□□□ 0.39
NXF1-204ENST00000527064 COL2A1P02458 1487 aaPredicted RBP17.48■□□□□ 0.39
NXF1-204ENST00000527064 CA12O43570 354 aa17.47■□□□□ 0.39
NXF1-204ENST00000527064 ZSCAN29Q8IWY8 852 aaPredicted RBP17.47■□□□□ 0.39
NXF1-204ENST00000527064 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.47■□□□□ 0.39
NXF1-204ENST00000527064 CSRNP1Q96S65 589 aa17.47■□□□□ 0.39
NXF1-204ENST00000527064 ZNF341Q9BYN7 854 aa17.47■□□□□ 0.39
NXF1-204ENST00000527064 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.47■□□□□ 0.394e-7■■■■■ 37.3
NXF1-204ENST00000527064 CSADQ9Y600 493 aa17.47■□□□□ 0.39
NXF1-204ENST00000527064 OTOFQ9HC10 1997 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms