RNA–Protein interactions for RNA: ENST00000526664.5

PDE4DIP-223, Transcript of phosphodiesterase 4D interacting protein, human

TSL 5

Gene PDE4DIP, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE4DIP-223	ENST00000526664	USP2	O75604	605 aa	Predicted RBP	11.94	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	TTC39A	Q5SRH9	613 aa		11.94	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	RGMB	Q6NW40	437 aa		11.94	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	ERICH6	Q7L0X2	663 aa		11.94	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	ADGRA1	Q86SQ6	560 aa		11.94	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	ZFPM1	Q8IX07	1006 aa		11.94	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	ANTXR1	Q9H6X2	564 aa		11.94	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	WBP1L	Q9NX94	342 aa		11.94	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	SUPT16H	Q9Y5B9	1047 aa	Known RBP	11.94	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	LAMB1	P07942	1786 aa		11.94	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	ATRNL1	Q5VV63	1379 aa		11.93	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	CDK5RAP2	Q96SN8	1893 aa		11.93	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	RPAP1	Q9BWH6	1393 aa	Predicted RBP	11.93	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	UBE2Q2L	H0YL09	131 aa		11.93	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	APBB1	O00213	710 aa		11.93	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	SMARCA5	O60264	1052 aa	Predicted RBP	11.93	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	WDHD1	O75717	1129 aa	Predicted RBP	11.93	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	SLC10A3	P09131	477 aa		11.93	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	SPTY2D1	Q68D10	685 aa	Predicted RBP	11.93	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	RASAL3	Q86YV0	1011 aa		11.93	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	CLASRP	Q8N2M8	674 aa	Known RBP	11.93	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	11.93	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	IDI2	Q9BXS1	227 aa		11.93	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	DDX4	Q9NQI0	724 aa	Known RBP	11.93	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	MAP2K2	P36507	400 aa		11.92	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	TNFAIP1	Q13829	316 aa		11.92	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	SH3BP5L	Q7L8J4	393 aa		11.92	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	EXOC6	Q8TAG9	804 aa		11.92	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	LRRCC1	Q9C099	1032 aa		11.92	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	SALL3	Q9BXA9	1300 aa		11.91	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	IGSF3	O75054	1194 aa		11.91	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	HSPA1A	P0DMV8	641 aa	Known RBP	11.91	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	HSPA1B	P0DMV9	641 aa	Known RBP	11.91	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	ATP5J	P18859	108 aa		11.91	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	ECE1	P42892	770 aa		11.91	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	BTD	P43251	543 aa		11.91	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	PPP4C	P60510	307 aa		11.91	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	HDAC1	Q13547	482 aa	Predicted RBP	11.91	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	DZIP1	Q86YF9	867 aa	Known RBP	11.91	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	FAM151A	Q8WW52	585 aa		11.91	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	EDC3	Q96F86	508 aa	Known RBP	11.91	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	CLMN	Q96JQ2	1002 aa		11.91	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	USP40	Q9NVE5	1235 aa		11.91	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	SIPA1L1	O43166	1804 aa		11.9	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	FOCAD	Q5VW36	1801 aa		11.9	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	NPM3	O75607	178 aa	Known RBP	11.9	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	ZNF157	P51786	506 aa	Predicted RBP	11.9	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	MAP3K10	Q02779	954 aa		11.9	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	NOG	Q13253	232 aa		11.9	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	PRKG1	Q13976	671 aa		11.9	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	SUPT20HL1	Q3ZLR7	823 aa		11.9	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	11.9	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	RAI14	Q9P0K7	980 aa		11.9	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	LRP2BP	Q9P2M1	347 aa		11.9	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	ANGEL1	Q9UNK9	670 aa	Known RBP	11.9	□□□□□ -0.5
PDE4DIP-223	ENST00000526664	DDTL	A6NHG4	134 aa	Predicted RBP	11.89	□□□□□ -0.51
PDE4DIP-223	ENST00000526664	UNCX	A6NJT0	531 aa		11.89	□□□□□ -0.51
PDE4DIP-223	ENST00000526664	FOXN1	O15353	648 aa		11.89	□□□□□ -0.51
PDE4DIP-223	ENST00000526664	ENTPD3	O75355	529 aa		11.89	□□□□□ -0.51
PDE4DIP-223	ENST00000526664	SLURP2	P0DP57	97 aa		11.89	□□□□□ -0.51
PDE4DIP-223	ENST00000526664	NF2	P35240	595 aa		11.89	□□□□□ -0.51
PDE4DIP-223	ENST00000526664	GJA5	P36382	358 aa		11.89	□□□□□ -0.51
PDE4DIP-223	ENST00000526664	TNNI2	P48788	182 aa		11.89	□□□□□ -0.51
PDE4DIP-223	ENST00000526664	RGS3	P49796	1198 aa		11.89	□□□□□ -0.51
PDE4DIP-223	ENST00000526664	KIF23	Q02241	960 aa	Predicted RBP	11.89	□□□□□ -0.51
PDE4DIP-223	ENST00000526664	AAMP	Q13685	434 aa		11.89	□□□□□ -0.51
PDE4DIP-223	ENST00000526664	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	11.89	□□□□□ -0.51
PDE4DIP-223	ENST00000526664	OTUD7A	Q8TE49	926 aa	Predicted RBP	11.89	□□□□□ -0.51
PDE4DIP-223	ENST00000526664	CCDC102A	Q96A19	550 aa		11.89	□□□□□ -0.51
PDE4DIP-223	ENST00000526664	CSRNP1	Q96S65	589 aa		11.89	□□□□□ -0.51
PDE4DIP-223	ENST00000526664	ZNF112	Q9UJU3	913 aa		11.89	□□□□□ -0.51
PDE4DIP-223	ENST00000526664	TCRBV5S4A2T	A0A5A2	114 aa		11.88	□□□□□ -0.51
PDE4DIP-223	ENST00000526664	IGHD	P01880	384 aa		11.88	□□□□□ -0.51
PDE4DIP-223	ENST00000526664	CHGB	P05060	677 aa		11.88	□□□□□ -0.51
PDE4DIP-223	ENST00000526664	LDHC	P07864	332 aa		11.88	□□□□□ -0.51
PDE4DIP-223	ENST00000526664	IFIT2	P09913	472 aa	Known RBP	11.88	□□□□□ -0.51
PDE4DIP-223	ENST00000526664	TCP10	Q12799	353 aa		11.88	□□□□□ -0.51
PDE4DIP-223	ENST00000526664	NAA16	Q6N069	864 aa	Predicted RBP	11.88	□□□□□ -0.51
PDE4DIP-223	ENST00000526664	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.88	□□□□□ -0.51
PDE4DIP-223	ENST00000526664	ARMC9	Q7Z3E5	817 aa		11.88	□□□□□ -0.51
PDE4DIP-223	ENST00000526664	SLF2	Q8IX21	1173 aa		11.88	□□□□□ -0.51
PDE4DIP-223	ENST00000526664	SMC5	Q8IY18	1101 aa		11.88	□□□□□ -0.51
PDE4DIP-223	ENST00000526664	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	11.88	□□□□□ -0.51
PDE4DIP-223	ENST00000526664	HAUS7	Q99871	368 aa		11.88	□□□□□ -0.51
PDE4DIP-223	ENST00000526664	COL2A1	P02458	1487 aa	Predicted RBP	11.88	□□□□□ -0.51
PDE4DIP-223	ENST00000526664	PPP1R12B	O60237	982 aa	Predicted RBP	11.87	□□□□□ -0.51
PDE4DIP-223	ENST00000526664	MAP4K4	O95819	1239 aa	Predicted RBP	11.87	□□□□□ -0.51
PDE4DIP-223	ENST00000526664	DYNLL1	P63167	89 aa	Known RBP	11.87	□□□□□ -0.51
PDE4DIP-223	ENST00000526664	GSTO1	P78417	241 aa		11.87	□□□□□ -0.51
PDE4DIP-223	ENST00000526664	MAP2K1	Q02750	393 aa	Predicted RBP	11.87	□□□□□ -0.51
PDE4DIP-223	ENST00000526664	GRM1	Q13255	1194 aa		11.87	□□□□□ -0.51
PDE4DIP-223	ENST00000526664	TTLL12	Q14166	644 aa	Predicted RBP	11.87	□□□□□ -0.51
PDE4DIP-223	ENST00000526664	SPRYD7	Q5W111	196 aa		11.87	□□□□□ -0.51
PDE4DIP-223	ENST00000526664	PI4K2B	Q8TCG2	481 aa		11.87	□□□□□ -0.51
PDE4DIP-223	ENST00000526664	RIOK1	Q9BRS2	568 aa	Known RBP	11.87	□□□□□ -0.51
PDE4DIP-223	ENST00000526664	BOLA2	Q9H3K6	86 aa		11.87	□□□□□ -0.51
PDE4DIP-223	ENST00000526664	AATF	Q9NY61	560 aa	Known RBP eCLIP	11.87	□□□□□ -0.51
PDE4DIP-223	ENST00000526664	TMOD2	Q9NZR1	351 aa		11.87	□□□□□ -0.51
PDE4DIP-223	ENST00000526664	DDX60L	Q5H9U9	1706 aa	Known RBP	11.86	□□□□□ -0.51
PDE4DIP-223	ENST00000526664	MYH7	P12883	1935 aa		11.86	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms