RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 PPP1R9AQ9ULJ8 1098 aa6.14□□□□□ -1.43
ECHDC1-219ENST00000526299 NPR3P17342 541 aa6.13□□□□□ -1.43
ECHDC1-219ENST00000526299 CDK5R2Q13319 367 aa6.13□□□□□ -1.43
ECHDC1-219ENST00000526299 CYP27C1Q4G0S4 372 aa6.13□□□□□ -1.43
ECHDC1-219ENST00000526299 NETO1Q8TDF5 533 aa6.13□□□□□ -1.43
ECHDC1-219ENST00000526299 MISP3Q96FF7 219 aa6.13□□□□□ -1.43
ECHDC1-219ENST00000526299 WDR18Q9BV38 432 aa6.13□□□□□ -1.43
ECHDC1-219ENST00000526299 CCDC87Q9NVE4 849 aa6.13□□□□□ -1.43
ECHDC1-219ENST00000526299 U3KQE9 123 aa6.13□□□□□ -1.43
ECHDC1-219ENST00000526299 FAM87AP0C7U9 286 aa6.12□□□□□ -1.43
ECHDC1-219ENST00000526299 PDE3AQ14432 1141 aa6.12□□□□□ -1.43
ECHDC1-219ENST00000526299 GJD3Q8N144 294 aa6.12□□□□□ -1.43
ECHDC1-219ENST00000526299 LRRN4CLQ8ND94 238 aa6.12□□□□□ -1.43
ECHDC1-219ENST00000526299 ZFYVE1Q9HBF4 777 aa6.12□□□□□ -1.43
ECHDC1-219ENST00000526299 B3GALT4O96024 378 aa6.11□□□□□ -1.43
ECHDC1-219ENST00000526299 PKN1Q16512 942 aa6.11□□□□□ -1.43
ECHDC1-219ENST00000526299 KSR1Q8IVT5 923 aa6.11□□□□□ -1.43
ECHDC1-219ENST00000526299 GALNT12Q8IXK2 581 aa6.11□□□□□ -1.43
ECHDC1-219ENST00000526299 TMPRSS2O15393 492 aa6.1□□□□□ -1.43
ECHDC1-219ENST00000526299 FAM13AO94988 1023 aa6.1□□□□□ -1.43
ECHDC1-219ENST00000526299 LIG1P18858 919 aa6.1□□□□□ -1.43
ECHDC1-219ENST00000526299 SSFA2P28290 1259 aa6.1□□□□□ -1.43
ECHDC1-219ENST00000526299 USPL1Q5W0Q7 1092 aa6.1□□□□□ -1.43
ECHDC1-219ENST00000526299 PI4K2BQ8TCG2 481 aa6.1□□□□□ -1.43
ECHDC1-219ENST00000526299 TMEM40Q8WWA1 233 aa6.1□□□□□ -1.43
ECHDC1-219ENST00000526299 WDR89Q96FK6 387 aaPredicted RBP6.1□□□□□ -1.43
ECHDC1-219ENST00000526299 ZNF576Q9H609 170 aa6.1□□□□□ -1.43
ECHDC1-219ENST00000526299 VAV3Q9UKW4 847 aa6.1□□□□□ -1.43
ECHDC1-219ENST00000526299 KRTAP9-7A8MTY7 169 aa6.09□□□□□ -1.43
ECHDC1-219ENST00000526299 PRKCQQ04759 706 aa6.09□□□□□ -1.43
ECHDC1-219ENST00000526299 DDX54Q8TDD1 881 aaKnown RBP6.09□□□□□ -1.43
ECHDC1-219ENST00000526299 SYNGAP1Q96PV0 1343 aa6.08□□□□□ -1.44
ECHDC1-219ENST00000526299 LEFTY1O75610 366 aa6.08□□□□□ -1.44
ECHDC1-219ENST00000526299 AOC3Q16853 763 aa6.08□□□□□ -1.44
ECHDC1-219ENST00000526299 FANCD2OSQ96PS1 177 aa6.08□□□□□ -1.44
ECHDC1-219ENST00000526299 SLC38A3Q99624 504 aa6.08□□□□□ -1.44
ECHDC1-219ENST00000526299 KRTAP4-11Q9BYQ6 195 aa6.08□□□□□ -1.44
ECHDC1-219ENST00000526299 ZC3H12CQ9C0D7 883 aaKnown RBP6.08□□□□□ -1.44
ECHDC1-219ENST00000526299 PIDD1Q9HB75 910 aa6.08□□□□□ -1.44
ECHDC1-219ENST00000526299 ANO2Q9NQ90 1003 aa6.08□□□□□ -1.44
ECHDC1-219ENST00000526299 CRIM1Q9NZV1 1036 aa6.08□□□□□ -1.44
ECHDC1-219ENST00000526299 ITPKAP23677 461 aa6.07□□□□□ -1.44
ECHDC1-219ENST00000526299 FKBP4Q02790 459 aaKnown RBP eCLIP6.07□□□□□ -1.44
ECHDC1-219ENST00000526299 MESP2Q0VG99 397 aa6.07□□□□□ -1.44
ECHDC1-219ENST00000526299 KIAA0319Q5VV43 1072 aa6.07□□□□□ -1.44
ECHDC1-219ENST00000526299 CCDC86Q9H6F5 360 aaKnown RBP6.07□□□□□ -1.44
ECHDC1-219ENST00000526299 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.07□□□□□ -1.44
ECHDC1-219ENST00000526299 PLAGL2Q9UPG8 496 aa6.07□□□□□ -1.44
ECHDC1-219ENST00000526299 TMEM88BA6NKF7 163 aa6.06□□□□□ -1.44
ECHDC1-219ENST00000526299 CEACAM5P06731 702 aa6.06□□□□□ -1.44
ECHDC1-219ENST00000526299 ZNF157P51786 506 aaPredicted RBP6.06□□□□□ -1.44
ECHDC1-219ENST00000526299 OXCT1P55809 520 aa6.06□□□□□ -1.44
ECHDC1-219ENST00000526299 AP3B2Q13367 1082 aa6.06□□□□□ -1.44
ECHDC1-219ENST00000526299 ZNF211Q13398 564 aaPredicted RBP6.06□□□□□ -1.44
ECHDC1-219ENST00000526299 IFI16Q16666 785 aaKnown RBP6.06□□□□□ -1.44
ECHDC1-219ENST00000526299 SMYD4Q8IYR2 804 aaPredicted RBP6.06□□□□□ -1.44
ECHDC1-219ENST00000526299 CCDC97Q96F63 343 aaPredicted RBP6.06□□□□□ -1.44
ECHDC1-219ENST00000526299 FAM84AQ96KN4 292 aa6.06□□□□□ -1.44
ECHDC1-219ENST00000526299 EHD4Q9H223 541 aa6.06□□□□□ -1.44
ECHDC1-219ENST00000526299 ATXN3LQ9H3M9 355 aa6.06□□□□□ -1.44
ECHDC1-219ENST00000526299 PRDM7Q9NQW5 492 aa6.06□□□□□ -1.44
ECHDC1-219ENST00000526299 DISC1Q9NRI5 854 aa6.06□□□□□ -1.44
ECHDC1-219ENST00000526299 ZNF862O60290 1169 aa6.05□□□□□ -1.44
ECHDC1-219ENST00000526299 ABL1P00519 1130 aa6.05□□□□□ -1.44
ECHDC1-219ENST00000526299 ID3Q02535 119 aa6.05□□□□□ -1.44
ECHDC1-219ENST00000526299 SF3B2Q13435 895 aaKnown RBP6.05□□□□□ -1.44
ECHDC1-219ENST00000526299 TTLL4Q14679 1199 aa6.05□□□□□ -1.44
ECHDC1-219ENST00000526299 ARHGAP27Q6ZUM4 889 aa6.05□□□□□ -1.44
ECHDC1-219ENST00000526299 HRASLS5Q96KN8 279 aa6.05□□□□□ -1.44
ECHDC1-219ENST00000526299 LRRC10BA6NIK2 292 aa6.04□□□□□ -1.44
ECHDC1-219ENST00000526299 RNGTTO60942 597 aaKnown RBP6.04□□□□□ -1.44
ECHDC1-219ENST00000526299 SLFN14P0C7P3 912 aa6.04□□□□□ -1.44
ECHDC1-219ENST00000526299 HCLS1P14317 486 aaPredicted RBP6.04□□□□□ -1.44
ECHDC1-219ENST00000526299 CILP2Q8IUL8 1156 aa6.04□□□□□ -1.44
ECHDC1-219ENST00000526299 DUSP23Q9BVJ7 150 aa6.04□□□□□ -1.44
ECHDC1-219ENST00000526299 MKNK2Q9HBH9 465 aa6.04□□□□□ -1.44
ECHDC1-219ENST00000526299 NPHS2Q9NP85 383 aa6.04□□□□□ -1.44
ECHDC1-219ENST00000526299 PCDHGC5Q9Y5F6 944 aa6.04□□□□□ -1.44
ECHDC1-219ENST00000526299 TMEM265A0A087WTH1 108 aa6.03□□□□□ -1.44
ECHDC1-219ENST00000526299 ZNF503-AS2A6NEH8 195 aa6.03□□□□□ -1.44
ECHDC1-219ENST00000526299 ZNF865P0CJ78 1059 aaPredicted RBP6.03□□□□□ -1.44
ECHDC1-219ENST00000526299 ITIH2P19823 946 aa6.03□□□□□ -1.44
ECHDC1-219ENST00000526299 FAAP100Q0VG06 881 aa6.03□□□□□ -1.44
ECHDC1-219ENST00000526299 MLANAQ16655 118 aa6.03□□□□□ -1.44
ECHDC1-219ENST00000526299 ANGEL2Q5VTE6 544 aaKnown RBP6.03□□□□□ -1.44
ECHDC1-219ENST00000526299 PHLDB3Q6NSJ2 640 aa6.03□□□□□ -1.44
ECHDC1-219ENST00000526299 ABCB6Q9NP58 842 aa6.03□□□□□ -1.44
ECHDC1-219ENST00000526299 SERPINA10Q9UK55 444 aa6.03□□□□□ -1.44
ECHDC1-219ENST00000526299 ORC1Q13415 861 aa6.02□□□□□ -1.45
ECHDC1-219ENST00000526299 KIF4BQ2VIQ3 1234 aa6.02□□□□□ -1.45
ECHDC1-219ENST00000526299 SLC23A3Q6PIS1 610 aa6.02□□□□□ -1.45
ECHDC1-219ENST00000526299 ZSWIM9Q86XI8 627 aa6.02□□□□□ -1.45
ECHDC1-219ENST00000526299 TOP6BLQ8N6T0 577 aa6.02□□□□□ -1.45
ECHDC1-219ENST00000526299 FLAD1Q8NFF5 587 aa6.02□□□□□ -1.45
ECHDC1-219ENST00000526299 PCOLCE2Q9UKZ9 415 aa6.02□□□□□ -1.45
ECHDC1-219ENST00000526299 MTMR7Q9Y216 660 aa6.02□□□□□ -1.45
ECHDC1-219ENST00000526299 CARNS1A5YM72 827 aa6.01□□□□□ -1.45
ECHDC1-219ENST00000526299 NEFMP07197 916 aa6.01□□□□□ -1.45
ECHDC1-219ENST00000526299 GSTP1P09211 210 aaKnown RBP6.01□□□□□ -1.45
ECHDC1-219ENST00000526299 CFPP27918 469 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms