RNA–Protein interactions for RNA: ENST00000524843.5

CASP4-204, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 978 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-204ENST00000524843 USP48Q86UV5 1035 aa8.75□□□□□ -1.01
CASP4-204ENST00000524843 SGMS1Q86VZ5 419 aa8.75□□□□□ -1.01
CASP4-204ENST00000524843 GRAPLQ8TC17 118 aaPredicted RBP8.75□□□□□ -1.01
CASP4-204ENST00000524843 STAG1Q8WVM7 1258 aa8.75□□□□□ -1.01
CASP4-204ENST00000524843 LARP6Q9BRS8 491 aaKnown RBP8.75□□□□□ -1.01
CASP4-204ENST00000524843 LRP2BPQ9P2M1 347 aa8.75□□□□□ -1.01
CASP4-204ENST00000524843 SRP68Q9UHB9 627 aaKnown RBP8.75□□□□□ -1.01
CASP4-204ENST00000524843 CFAP45Q9UL16 551 aa8.75□□□□□ -1.01
CASP4-204ENST00000524843 CNPY2Q9Y2B0 182 aa8.75□□□□□ -1.01
CASP4-204ENST00000524843 LEMD3Q9Y2U8 911 aa8.75□□□□□ -1.01
CASP4-204ENST00000524843 STK36Q9NRP7 1315 aa8.75□□□□□ -1.01
CASP4-204ENST00000524843 ECM29Q5VYK3 1845 aa8.75□□□□□ -1.01
CASP4-204ENST00000524843 SH2B2O14492 632 aaPredicted RBP8.74□□□□□ -1.01
CASP4-204ENST00000524843 FIBPO43427 364 aa8.74□□□□□ -1.01
CASP4-204ENST00000524843 APPP05067 770 aa8.74□□□□□ -1.01
CASP4-204ENST00000524843 NASPP49321 788 aaPredicted RBP8.74□□□□□ -1.01
CASP4-204ENST00000524843 BCAMP50895 628 aa8.74□□□□□ -1.01
CASP4-204ENST00000524843 ANTXR2P58335 489 aa8.74□□□□□ -1.01
CASP4-204ENST00000524843 HAND2P61296 217 aa8.74□□□□□ -1.01
CASP4-204ENST00000524843 RESTQ13127 1097 aa8.74□□□□□ -1.01
CASP4-204ENST00000524843 STK3Q13188 491 aa8.74□□□□□ -1.01
CASP4-204ENST00000524843 SLFNL1Q499Z3 407 aa8.74□□□□□ -1.01
CASP4-204ENST00000524843 AKNAD1Q5T1N1 836 aa8.74□□□□□ -1.01
CASP4-204ENST00000524843 TTLL5Q6EMB2 1281 aa8.74□□□□□ -1.01
CASP4-204ENST00000524843 BICDL1Q6ZP65 573 aa8.74□□□□□ -1.01
CASP4-204ENST00000524843 KRT27Q7Z3Y8 459 aa8.74□□□□□ -1.01
CASP4-204ENST00000524843 TBC1D10CQ8IV04 446 aa8.74□□□□□ -1.01
CASP4-204ENST00000524843 IFNL3Q8IZI9 196 aa8.74□□□□□ -1.01
CASP4-204ENST00000524843 CELF1Q92879 486 aaKnown RBP8.74□□□□□ -1.01
CASP4-204ENST00000524843 ZNF396Q96N95 335 aaPredicted RBP8.74□□□□□ -1.01
CASP4-204ENST00000524843 BRIP1Q9BX63 1249 aa8.74□□□□□ -1.01
CASP4-204ENST00000524843 EPB41L4AQ9HCS5 686 aaPredicted RBP8.74□□□□□ -1.01
CASP4-204ENST00000524843 TMEM63CQ9P1W3 806 aa8.74□□□□□ -1.01
CASP4-204ENST00000524843 ANAPC4Q9UJX5 808 aa8.74□□□□□ -1.01
CASP4-204ENST00000524843 TAF1P21675 1872 aa8.74□□□□□ -1.01
CASP4-204ENST00000524843 XDHP47989 1333 aa8.74□□□□□ -1.01
CASP4-204ENST00000524843 NAV1Q8NEY1 1877 aa8.73□□□□□ -1.01
CASP4-204ENST00000524843 MAGEB6P1A0A0J9YX57 407 aa8.73□□□□□ -1.01
CASP4-204ENST00000524843 KLF18A0A0U1RQI7 1052 aa8.73□□□□□ -1.01
CASP4-204ENST00000524843 CPLX1O14810 134 aa8.73□□□□□ -1.01
CASP4-204ENST00000524843 CYP7A1P22680 504 aa8.73□□□□□ -1.01
CASP4-204ENST00000524843 HIBADHP31937 336 aaKnown RBP8.73□□□□□ -1.01
CASP4-204ENST00000524843 TDO2P48775 406 aa8.73□□□□□ -1.01
CASP4-204ENST00000524843 DNM1Q05193 864 aaKnown RBP8.73□□□□□ -1.01
CASP4-204ENST00000524843 NFIXQ14938 502 aa8.73□□□□□ -1.01
CASP4-204ENST00000524843 PPP2R5BQ15173 497 aa8.73□□□□□ -1.01
CASP4-204ENST00000524843 CRY2Q49AN0 593 aa8.73□□□□□ -1.01
CASP4-204ENST00000524843 ZNF772Q68DY9 489 aaPredicted RBP8.73□□□□□ -1.01
CASP4-204ENST00000524843 C3orf67Q6ZVT6 689 aa8.73□□□□□ -1.01
CASP4-204ENST00000524843 BRAPQ7Z569 592 aa8.73□□□□□ -1.01
CASP4-204ENST00000524843 TMTC2Q8N394 836 aa8.73□□□□□ -1.01
CASP4-204ENST00000524843 ZNF579Q8NAF0 562 aaKnown RBP8.73□□□□□ -1.01
CASP4-204ENST00000524843 FAM84BQ96KN1 310 aaPredicted RBP8.73□□□□□ -1.01
CASP4-204ENST00000524843 LRRC2Q9BYS8 371 aa8.73□□□□□ -1.01
CASP4-204ENST00000524843 TSPY26PQ9H489 355 aa8.73□□□□□ -1.01
CASP4-204ENST00000524843 QTRT2Q9H974 415 aaKnown RBP8.73□□□□□ -1.01
CASP4-204ENST00000524843 DDX19AQ9NUU7 478 aaKnown RBP8.73□□□□□ -1.01
CASP4-204ENST00000524843 LTBP1Q14766 1721 aa8.73□□□□□ -1.01
CASP4-204ENST00000524843 QSER1Q2KHR3 1735 aa8.73□□□□□ -1.01
CASP4-204ENST00000524843 TNS1Q9HBL0 1735 aaKnown RBP8.72□□□□□ -1.01
CASP4-204ENST00000524843 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.72□□□□□ -1.01
CASP4-204ENST00000524843 ERICH2A1L162 156 aa8.72□□□□□ -1.01
CASP4-204ENST00000524843 GOLGA6L4A6NEF3 574 aa8.72□□□□□ -1.01
CASP4-204ENST00000524843 GSG1L2A8MUP6 293 aa8.72□□□□□ -1.01
CASP4-204ENST00000524843 JAK2O60674 1132 aa8.72□□□□□ -1.01
CASP4-204ENST00000524843 PYGBP11216 843 aa8.72□□□□□ -1.01
CASP4-204ENST00000524843 METAP2P50579 478 aaKnown RBP eCLIP8.72□□□□□ -1.01
CASP4-204ENST00000524843 GSTO1P78417 241 aa8.72□□□□□ -1.01
CASP4-204ENST00000524843 COL9A3Q14050 684 aaPredicted RBP8.72□□□□□ -1.01
CASP4-204ENST00000524843 UVSSAQ2YD98 709 aa8.72□□□□□ -1.01
CASP4-204ENST00000524843 SYNE3Q6ZMZ3 975 aa8.72□□□□□ -1.01
CASP4-204ENST00000524843 MFSD6Q6ZSS7 791 aa8.72□□□□□ -1.01
CASP4-204ENST00000524843 PTF1AQ7RTS3 328 aa8.72□□□□□ -1.01
CASP4-204ENST00000524843 ZNF804AQ7Z570 1209 aa8.72□□□□□ -1.01
CASP4-204ENST00000524843 LCORLQ8N3X6 602 aa8.72□□□□□ -1.01
CASP4-204ENST00000524843 FLAD1Q8NFF5 587 aa8.72□□□□□ -1.01
CASP4-204ENST00000524843 WDR66Q8TBY9 1149 aa8.72□□□□□ -1.01
CASP4-204ENST00000524843 WASF1Q92558 559 aa8.72□□□□□ -1.01
CASP4-204ENST00000524843 RPGRQ92834 1020 aaKnown RBP8.72□□□□□ -1.01
CASP4-204ENST00000524843 SPATA32Q96LK8 384 aa8.72□□□□□ -1.01
CASP4-204ENST00000524843 CRNKL1Q9BZJ0 848 aaKnown RBP8.72□□□□□ -1.01
CASP4-204ENST00000524843 NBPF3Q9H094 633 aa8.72□□□□□ -1.01
CASP4-204ENST00000524843 ARMT1Q9H993 441 aa8.72□□□□□ -1.01
CASP4-204ENST00000524843 RAI14Q9P0K7 980 aa8.72□□□□□ -1.01
CASP4-204ENST00000524843 SLC4A4Q9Y6R1 1079 aa8.72□□□□□ -1.01
CASP4-204ENST00000524843 NEDD4P46934 1319 aa8.72□□□□□ -1.01
CASP4-204ENST00000524843 IRS2Q9Y4H2 1338 aa8.72□□□□□ -1.01
CASP4-204ENST00000524843 CCDC196A0A1B0GTZ2 297 aa8.71□□□□□ -1.02
CASP4-204ENST00000524843 SYCE3A1L190 88 aa8.71□□□□□ -1.02
CASP4-204ENST00000524843 ZBTB43O43298 467 aa8.71□□□□□ -1.02
CASP4-204ENST00000524843 CTDNEP1O95476 244 aa8.71□□□□□ -1.02
CASP4-204ENST00000524843 SLC3A2P08195 630 aaKnown RBP8.71□□□□□ -1.02
CASP4-204ENST00000524843 ATP2B4P23634 1241 aa8.71□□□□□ -1.02
CASP4-204ENST00000524843 HOXA10P31260 410 aaPredicted RBP8.71□□□□□ -1.02
CASP4-204ENST00000524843 GYG1P46976 350 aa8.71□□□□□ -1.02
CASP4-204ENST00000524843 RBM6P78332 1123 aaKnown RBP8.71□□□□□ -1.02
CASP4-204ENST00000524843 PPARAQ07869 468 aa8.71□□□□□ -1.02
CASP4-204ENST00000524843 TMEM67Q5HYA8 995 aa8.71□□□□□ -1.02
CASP4-204ENST00000524843 PRR5LQ6MZQ0 368 aa8.71□□□□□ -1.02
CASP4-204ENST00000524843 APOA5Q6Q788 366 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms