RNA–Protein interactions for RNA: ENST00000524533.1

HIF3A-208, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 507 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-208ENST00000524533 LDHBP07195 334 aaKnown RBP20.24■□□□□ 0.83
HIF3A-208ENST00000524533 CETPP11597 493 aa20.24■□□□□ 0.83
HIF3A-208ENST00000524533 IL15P40933 162 aaPredicted RBP20.24■□□□□ 0.83
HIF3A-208ENST00000524533 PRPF38BQ5VTL8 546 aaKnown RBP20.24■□□□□ 0.83
HIF3A-208ENST00000524533 INTS3Q68E01 1043 aaKnown RBP20.24■□□□□ 0.83
HIF3A-208ENST00000524533 MEIS3Q99687 375 aa20.24■□□□□ 0.83
HIF3A-208ENST00000524533 ZNF341Q9BYN7 854 aa20.24■□□□□ 0.83
HIF3A-208ENST00000524533 PA2G4Q9UQ80 394 aaKnown RBP20.24■□□□□ 0.83
HIF3A-208ENST00000524533 AK9Q5TCS8 1911 aa20.23■□□□□ 0.83
HIF3A-208ENST00000524533 DOCK2Q92608 1830 aa20.23■□□□□ 0.83
HIF3A-208ENST00000524533 SEMA3EO15041 775 aa20.23■□□□□ 0.83
HIF3A-208ENST00000524533 WDHD1O75717 1129 aaPredicted RBP20.23■□□□□ 0.83
HIF3A-208ENST00000524533 PPIL2Q13356 520 aa20.23■□□□□ 0.83
HIF3A-208ENST00000524533 CDC42EP5Q6NZY7 148 aa20.23■□□□□ 0.83
HIF3A-208ENST00000524533 FAM151AQ8WW52 585 aa20.23■□□□□ 0.83
HIF3A-208ENST00000524533 DENND2AQ9ULE3 1009 aa20.23■□□□□ 0.83
HIF3A-208ENST00000524533 SALL1Q9NSC2 1324 aa20.23■□□□□ 0.83
HIF3A-208ENST00000524533 CCER2I3L3R5 266 aa20.22■□□□□ 0.83
HIF3A-208ENST00000524533 PHKA1P46020 1223 aa20.22■□□□□ 0.83
HIF3A-208ENST00000524533 RARSP54136 660 aaKnown RBP20.22■□□□□ 0.83
HIF3A-208ENST00000524533 SNAPC2Q13487 334 aa20.22■□□□□ 0.83
HIF3A-208ENST00000524533 MIGA2Q7L4E1 593 aa20.22■□□□□ 0.83
HIF3A-208ENST00000524533 COPRSQ9NQ92 184 aa20.22■□□□□ 0.83
HIF3A-208ENST00000524533 MYH2Q9UKX2 1941 aa20.21■□□□□ 0.83
HIF3A-208ENST00000524533 IRF6O14896 467 aa20.21■□□□□ 0.83
HIF3A-208ENST00000524533 CAP1Q01518 475 aa20.21■□□□□ 0.83
HIF3A-208ENST00000524533 TCP10Q12799 353 aa20.21■□□□□ 0.83
HIF3A-208ENST00000524533 ARHGEF6Q15052 776 aa20.21■□□□□ 0.83
HIF3A-208ENST00000524533 ZCCHC17Q9NP64 241 aaKnown RBP20.21■□□□□ 0.83
HIF3A-208ENST00000524533 ZSWIM8A7E2V4 1837 aa20.2■□□□□ 0.82
HIF3A-208ENST00000524533 ADORA1P30542 326 aa20.2■□□□□ 0.82
HIF3A-208ENST00000524533 INPP5BP32019 993 aa20.2■□□□□ 0.82
HIF3A-208ENST00000524533 PPATQ06203 517 aa20.2■□□□□ 0.82
HIF3A-208ENST00000524533 NFIAQ12857 509 aa20.2■□□□□ 0.82
HIF3A-208ENST00000524533 BTBD19C9JJ37 291 aa20.19■□□□□ 0.82
HIF3A-208ENST00000524533 GNAI3P08754 354 aa20.19■□□□□ 0.82
HIF3A-208ENST00000524533 CCDC102BQ68D86 513 aa20.19■□□□□ 0.82
HIF3A-208ENST00000524533 ZGPATQ8N5A5 531 aaKnown RBP20.19■□□□□ 0.82
HIF3A-208ENST00000524533 ARHGAP45Q92619 1136 aa20.19■□□□□ 0.82
HIF3A-208ENST00000524533 ARMC5Q96C12 935 aa20.19■□□□□ 0.82
HIF3A-208ENST00000524533 USP40Q9NVE5 1235 aa20.19■□□□□ 0.82
HIF3A-208ENST00000524533 POTEFA5A3E0 1075 aa20.18■□□□□ 0.82
HIF3A-208ENST00000524533 TLR2O60603 784 aa20.18■□□□□ 0.82
HIF3A-208ENST00000524533 FAM198AQ9UFP1 575 aa20.18■□□□□ 0.82
HIF3A-208ENST00000524533 CENPFP49454 3210 aa20.17■□□□□ 0.82
HIF3A-208ENST00000524533 ZBTB22O15209 634 aa20.17■□□□□ 0.82
HIF3A-208ENST00000524533 SRGAP3O43295 1099 aa20.17■□□□□ 0.82
HIF3A-208ENST00000524533 RASGRF1Q13972 1273 aa20.17■□□□□ 0.82
HIF3A-208ENST00000524533 DZIP1Q86YF9 867 aaKnown RBP20.17■□□□□ 0.82
HIF3A-208ENST00000524533 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.17■□□□□ 0.82
HIF3A-208ENST00000524533 ZNF112Q9UJU3 913 aa20.17■□□□□ 0.82
HIF3A-208ENST00000524533 PDS5AQ29RF7 1337 aaKnown RBP20.17■□□□□ 0.82
HIF3A-208ENST00000524533 A0A1B0GUL7 405 aa20.16■□□□□ 0.82
HIF3A-208ENST00000524533 TIMM10P62072 90 aa20.16■□□□□ 0.82
HIF3A-208ENST00000524533 KIF22Q14807 665 aa20.16■□□□□ 0.82
HIF3A-208ENST00000524533 AKAP2Q9Y2D5 859 aa20.16■□□□□ 0.82
HIF3A-208ENST00000524533 PTCH2Q9Y6C5 1203 aa20.16■□□□□ 0.82
HIF3A-208ENST00000524533 RFX7Q2KHR2 1363 aa20.16■□□□□ 0.82
HIF3A-208ENST00000524533 RGS3P49796 1198 aa20.15■□□□□ 0.82
HIF3A-208ENST00000524533 TFCP2Q12800 502 aa20.15■□□□□ 0.82
HIF3A-208ENST00000524533 MTX1Q13505 466 aa20.15■□□□□ 0.82
HIF3A-208ENST00000524533 SLC9C1Q4G0N8 1177 aa20.15■□□□□ 0.82
HIF3A-208ENST00000524533 NOL9Q5SY16 702 aaKnown RBP20.15■□□□□ 0.82
HIF3A-208ENST00000524533 ABCF2Q9UG63 623 aa20.15■□□□□ 0.82
HIF3A-208ENST00000524533 GAKO14976 1311 aa20.15■□□□□ 0.82
HIF3A-208ENST00000524533 ATRNL1Q5VV63 1379 aa20.14■□□□□ 0.81
HIF3A-208ENST00000524533 LACTBP83111 547 aaPredicted RBP20.14■□□□□ 0.81
HIF3A-208ENST00000524533 MVPQ14764 893 aaKnown RBP20.14■□□□□ 0.81
HIF3A-208ENST00000524533 ANKRD23Q86SG2 305 aa20.14■□□□□ 0.81
HIF3A-208ENST00000524533 ZFPM1Q8IX07 1006 aa20.14■□□□□ 0.81
HIF3A-208ENST00000524533 SLF2Q8IX21 1173 aa20.14■□□□□ 0.81
HIF3A-208ENST00000524533 XAGE2Q96GT9 111 aa20.14■□□□□ 0.81
HIF3A-208ENST00000524533 ZNF333Q96JL9 665 aa20.14■□□□□ 0.81
HIF3A-208ENST00000524533 IDI2Q9BXS1 227 aa20.14■□□□□ 0.81
HIF3A-208ENST00000524533 ARHGAP39Q9C0H5 1083 aa20.14■□□□□ 0.81
HIF3A-208ENST00000524533 KCNH4Q9UQ05 1017 aa20.14■□□□□ 0.81
HIF3A-208ENST00000524533 DOCK1Q14185 1865 aa20.13■□□□□ 0.81
HIF3A-208ENST00000524533 IPO8O15397 1037 aaKnown RBP20.13■□□□□ 0.81
HIF3A-208ENST00000524533 ENTPD3O75355 529 aa20.13■□□□□ 0.81
HIF3A-208ENST00000524533 SPTY2D1Q68D10 685 aaPredicted RBP20.13■□□□□ 0.81
HIF3A-208ENST00000524533 NBPF11Q86T75 865 aa20.13■□□□□ 0.81
HIF3A-208ENST00000524533 TMEM106CQ9BVX2 250 aa20.13■□□□□ 0.81
HIF3A-208ENST00000524533 MROH7-TTC4A0A0A0MT08 1334 aa20.12■□□□□ 0.81
HIF3A-208ENST00000524533 PDHXO00330 501 aa20.12■□□□□ 0.81
HIF3A-208ENST00000524533 TRIM27P14373 513 aa20.12■□□□□ 0.81
HIF3A-208ENST00000524533 ZSCAN29Q8IWY8 852 aaPredicted RBP20.12■□□□□ 0.81
HIF3A-208ENST00000524533 FRAT1Q92837 279 aaPredicted RBP20.12■□□□□ 0.81
HIF3A-208ENST00000524533 GNRH1P01148 92 aa20.11■□□□□ 0.81
HIF3A-208ENST00000524533 GNAI2P04899 355 aa20.11■□□□□ 0.81
HIF3A-208ENST00000524533 EN2P19622 333 aaPredicted RBP20.11■□□□□ 0.81
HIF3A-208ENST00000524533 BTDP43251 543 aa20.11■□□□□ 0.81
HIF3A-208ENST00000524533 ATF7IPQ6VMQ6 1270 aa20.11■□□□□ 0.81
HIF3A-208ENST00000524533 NEUROD6Q96NK8 337 aa20.11■□□□□ 0.81
HIF3A-208ENST00000524533 CPA4Q9UI42 421 aa20.11■□□□□ 0.81
HIF3A-208ENST00000524533 TNNQ9UQP3 1299 aa20.11■□□□□ 0.81
HIF3A-208ENST00000524533 KIAA0100Q14667 2235 aaKnown RBP20.1■□□□□ 0.81
HIF3A-208ENST00000524533 PICALMQ13492 652 aa20.1■□□□□ 0.81
HIF3A-208ENST00000524533 C17orf99Q6UX52 265 aa20.1■□□□□ 0.81
HIF3A-208ENST00000524533 ERICH6Q7L0X2 663 aa20.1■□□□□ 0.81
HIF3A-208ENST00000524533 SCYL3Q8IZE3 742 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms