RNA–Protein interactions for RNA: ENST00000523867.5

HDAC9-227, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best)

Gene HDAC9, Length 2,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-227ENST00000523867 POLR3GO15318 223 aaPredicted RBP8.45□□□□□ -1.06
HDAC9-227ENST00000523867 SASH1O94885 1247 aa8.45□□□□□ -1.06
HDAC9-227ENST00000523867 PROSER3Q2NL68 480 aa8.45□□□□□ -1.06
HDAC9-227ENST00000523867 CCDC93Q567U6 631 aa8.45□□□□□ -1.06
HDAC9-227ENST00000523867 DNAJC21Q5F1R6 531 aaKnown RBP8.45□□□□□ -1.06
HDAC9-227ENST00000523867 FAM210AQ96ND0 272 aa8.45□□□□□ -1.06
HDAC9-227ENST00000523867 BOLA2Q9H3K6 86 aa8.45□□□□□ -1.06
HDAC9-227ENST00000523867 TFIP11Q9UBB9 837 aaKnown RBP8.45□□□□□ -1.06
HDAC9-227ENST00000523867 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.45□□□□□ -1.06
HDAC9-227ENST00000523867 A0A0D9SFI3 127 aa8.45□□□□□ -1.06
HDAC9-227ENST00000523867 HMGB1P1B2RPK0 211 aaPredicted RBP8.45□□□□□ -1.06
HDAC9-227ENST00000523867 GRM8O00222 908 aa8.45□□□□□ -1.06
HDAC9-227ENST00000523867 GIGYF1O75420 1035 aaPredicted RBP8.45□□□□□ -1.06
HDAC9-227ENST00000523867 RPS6KB1P23443 525 aa8.45□□□□□ -1.06
HDAC9-227ENST00000523867 OAS2P29728 719 aaKnown RBP8.45□□□□□ -1.06
HDAC9-227ENST00000523867 ZC3H6P61129 1189 aaKnown RBP8.45□□□□□ -1.06
HDAC9-227ENST00000523867 STK3Q13188 491 aa8.45□□□□□ -1.06
HDAC9-227ENST00000523867 C1orf141Q5JVX7 400 aa8.45□□□□□ -1.06
HDAC9-227ENST00000523867 DRC7Q8IY82 874 aa8.45□□□□□ -1.06
HDAC9-227ENST00000523867 LINS1Q8NG48 757 aa8.45□□□□□ -1.06
HDAC9-227ENST00000523867 ITFG2Q969R8 447 aa8.45□□□□□ -1.06
HDAC9-227ENST00000523867 SUCLG2Q96I99 432 aa8.45□□□□□ -1.06
HDAC9-227ENST00000523867 SRRTQ9BXP5 876 aaKnown RBP8.45□□□□□ -1.06
HDAC9-227ENST00000523867 DDX19AQ9NUU7 478 aaKnown RBP8.45□□□□□ -1.06
HDAC9-227ENST00000523867 NPHP3Q7Z494 1330 aa8.45□□□□□ -1.06
HDAC9-227ENST00000523867 A0A087WUV0 522 aaPredicted RBP8.44□□□□□ -1.06
HDAC9-227ENST00000523867 COL9A3Q14050 684 aaPredicted RBP8.44□□□□□ -1.06
HDAC9-227ENST00000523867 SMC1AQ14683 1233 aaKnown RBP8.44□□□□□ -1.06
HDAC9-227ENST00000523867 ANO6Q4KMQ2 910 aa8.44□□□□□ -1.06
HDAC9-227ENST00000523867 LARP1Q6PKG0 1096 aaKnown RBP8.44□□□□□ -1.06
HDAC9-227ENST00000523867 NLGN1Q8N2Q7 840 aa8.44□□□□□ -1.06
HDAC9-227ENST00000523867 UTP14AQ9BVJ6 771 aaKnown RBP8.44□□□□□ -1.06
HDAC9-227ENST00000523867 SIL1Q9H173 461 aa8.44□□□□□ -1.06
HDAC9-227ENST00000523867 BICC1Q9H694 974 aaKnown RBP8.44□□□□□ -1.06
HDAC9-227ENST00000523867 SNRKQ9NRH2 765 aa8.44□□□□□ -1.06
HDAC9-227ENST00000523867 TLR7Q9NYK1 1049 aaKnown RBP8.44□□□□□ -1.06
HDAC9-227ENST00000523867 RNMTO43148 476 aaKnown RBP8.44□□□□□ -1.06
HDAC9-227ENST00000523867 DDX58O95786 925 aaKnown RBP8.44□□□□□ -1.06
HDAC9-227ENST00000523867 ZNF75DP51815 510 aa8.44□□□□□ -1.06
HDAC9-227ENST00000523867 IRX1P78414 480 aaPredicted RBP8.44□□□□□ -1.06
HDAC9-227ENST00000523867 AIMP1Q12904 312 aaKnown RBP8.44□□□□□ -1.06
HDAC9-227ENST00000523867 TOB2Q14106 344 aaPredicted RBP8.44□□□□□ -1.06
HDAC9-227ENST00000523867 PTPROQ16827 1216 aa8.44□□□□□ -1.06
HDAC9-227ENST00000523867 MAP9Q49MG5 647 aa8.44□□□□□ -1.06
HDAC9-227ENST00000523867 AMOTQ4VCS5 1084 aa8.44□□□□□ -1.06
HDAC9-227ENST00000523867 C1orf131Q8NDD1 294 aaKnown RBP8.44□□□□□ -1.06
HDAC9-227ENST00000523867 LEO1Q8WVC0 666 aaPredicted RBP8.44□□□□□ -1.06
HDAC9-227ENST00000523867 LRRC59Q96AG4 307 aaKnown RBP8.44□□□□□ -1.06
HDAC9-227ENST00000523867 TRIM5Q9C035 493 aa8.44□□□□□ -1.06
HDAC9-227ENST00000523867 NBPF3Q9H094 633 aa8.44□□□□□ -1.06
HDAC9-227ENST00000523867 ALDH8A1Q9H2A2 487 aaPredicted RBP8.44□□□□□ -1.06
HDAC9-227ENST00000523867 CBX8Q9HC52 389 aa8.44□□□□□ -1.06
HDAC9-227ENST00000523867 HMG20BQ9P0W2 317 aa8.44□□□□□ -1.06
HDAC9-227ENST00000523867 ADAM21Q9UKJ8 722 aa8.44□□□□□ -1.06
HDAC9-227ENST00000523867 PHF8Q9UPP1 1060 aa8.44□□□□□ -1.06
HDAC9-227ENST00000523867 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.44□□□□□ -1.06
HDAC9-227ENST00000523867 MARF1Q9Y4F3 1742 aaKnown RBP8.43□□□□□ -1.06
HDAC9-227ENST00000523867 ANKRD33BA6NCL7 494 aa8.43□□□□□ -1.06
HDAC9-227ENST00000523867 SMC2O95347 1197 aa8.43□□□□□ -1.06
HDAC9-227ENST00000523867 CAVIN2O95810 425 aa8.43□□□□□ -1.06
HDAC9-227ENST00000523867 E2F4Q16254 413 aa8.43□□□□□ -1.06
HDAC9-227ENST00000523867 BICD2Q8TD16 824 aa8.43□□□□□ -1.06
HDAC9-227ENST00000523867 KAZALD1Q96I82 304 aa8.43□□□□□ -1.06
HDAC9-227ENST00000523867 LRRC27Q9C0I9 530 aa8.43□□□□□ -1.06
HDAC9-227ENST00000523867 CLSTN2Q9H4D0 955 aa8.43□□□□□ -1.06
HDAC9-227ENST00000523867 C19orf44Q9H6X5 657 aa8.43□□□□□ -1.06
HDAC9-227ENST00000523867 KDM3BQ7LBC6 1761 aa8.43□□□□□ -1.06
HDAC9-227ENST00000523867 PRAMEF22A3QJZ6 481 aa8.43□□□□□ -1.06
HDAC9-227ENST00000523867 NPHP1O15259 732 aa8.43□□□□□ -1.06
HDAC9-227ENST00000523867 LRMPQ12912 555 aa8.43□□□□□ -1.06
HDAC9-227ENST00000523867 ERCC6LQ2NKX8 1250 aa8.43□□□□□ -1.06
HDAC9-227ENST00000523867 CCDC158Q5M9N0 1113 aa8.43□□□□□ -1.06
HDAC9-227ENST00000523867 KRI1Q8N9T8 703 aaKnown RBP8.43□□□□□ -1.06
HDAC9-227ENST00000523867 ORC3Q9UBD5 711 aaPredicted RBP8.43□□□□□ -1.06
HDAC9-227ENST00000523867 TAF6LQ9Y6J9 622 aa8.43□□□□□ -1.06
HDAC9-227ENST00000523867 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.42□□□□□ -1.06
HDAC9-227ENST00000523867 H0YHG0 523 aa8.42□□□□□ -1.06
HDAC9-227ENST00000523867 UTYO14607 1347 aa8.42□□□□□ -1.06
HDAC9-227ENST00000523867 CSB-PGBD3P0DP91 1061 aa8.42□□□□□ -1.06
HDAC9-227ENST00000523867 EIF5P55010 431 aaKnown RBP8.42□□□□□ -1.06
HDAC9-227ENST00000523867 IGBP1P78318 339 aa8.42□□□□□ -1.06
HDAC9-227ENST00000523867 SARNPP82979 210 aaKnown RBP8.42□□□□□ -1.06
HDAC9-227ENST00000523867 KRT32Q14532 448 aa8.42□□□□□ -1.06
HDAC9-227ENST00000523867 DHX8Q14562 1220 aaKnown RBP8.42□□□□□ -1.06
HDAC9-227ENST00000523867 ARHGAP29Q52LW3 1261 aa8.42□□□□□ -1.06
HDAC9-227ENST00000523867 EGFLAMQ63HQ2 1017 aa8.42□□□□□ -1.06
HDAC9-227ENST00000523867 TADA2BQ86TJ2 420 aa8.42□□□□□ -1.06
HDAC9-227ENST00000523867 ZNF589Q86UQ0 364 aaPredicted RBP8.42□□□□□ -1.06
HDAC9-227ENST00000523867 KCNH5Q8NCM2 988 aa8.42□□□□□ -1.06
HDAC9-227ENST00000523867 MED23Q9ULK4 1368 aa8.42□□□□□ -1.06
HDAC9-227ENST00000523867 NR1I2O75469 434 aa8.42□□□□□ -1.06
HDAC9-227ENST00000523867 COPB2P35606 906 aa8.42□□□□□ -1.06
HDAC9-227ENST00000523867 KCNJ6P48051 423 aa8.42□□□□□ -1.06
HDAC9-227ENST00000523867 ZNF165P49910 485 aa8.42□□□□□ -1.06
HDAC9-227ENST00000523867 RBM43Q6ZSC3 357 aaKnown RBP8.42□□□□□ -1.06
HDAC9-227ENST00000523867 RIC3Q7Z5B4 369 aa8.42□□□□□ -1.06
HDAC9-227ENST00000523867 LRRC8AQ8IWT6 810 aa8.42□□□□□ -1.06
HDAC9-227ENST00000523867 ENOX1Q8TC92 643 aaKnown RBP8.42□□□□□ -1.06
HDAC9-227ENST00000523867 CACTINQ8WUQ7 758 aaKnown RBP8.42□□□□□ -1.06
HDAC9-227ENST00000523867 RPS6KC1Q96S38 1066 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms