RNA–Protein interactions for RNA: ENST00000523555.5

PABPC1-222, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-222ENST00000523555 NDUFB9Q9Y6M9 179 aa11.72□□□□□ -0.53
PABPC1-222ENST00000523555 RFX7Q2KHR2 1363 aa11.71□□□□□ -0.53
PABPC1-222ENST00000523555 GAKO14976 1311 aa11.71□□□□□ -0.53
PABPC1-222ENST00000523555 NF2P35240 595 aa11.71□□□□□ -0.53
PABPC1-222ENST00000523555 MECOMQ03112 1051 aa11.71□□□□□ -0.53
PABPC1-222ENST00000523555 MAP3K11Q16584 847 aa11.71□□□□□ -0.53
PABPC1-222ENST00000523555 TTC39AQ5SRH9 613 aa11.71□□□□□ -0.53
PABPC1-222ENST00000523555 ARMC9Q7Z3E5 817 aa11.71□□□□□ -0.53
PABPC1-222ENST00000523555 ZFPM1Q8IX07 1006 aa11.71□□□□□ -0.53
PABPC1-222ENST00000523555 RPAP2Q8IXW5 612 aaPredicted RBP11.71□□□□□ -0.53
PABPC1-222ENST00000523555 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.71□□□□□ -0.53
PABPC1-222ENST00000523555 RHPN1Q8TCX5 695 aa11.71□□□□□ -0.53
PABPC1-222ENST00000523555 CSRNP1Q96S65 589 aa11.71□□□□□ -0.53
PABPC1-222ENST00000523555 FAM198AQ9UFP1 575 aa11.71□□□□□ -0.53
PABPC1-222ENST00000523555 SIPA1L1O43166 1804 aa11.71□□□□□ -0.54
PABPC1-222ENST00000523555 CYP2E1P05181 493 aaPredicted RBP11.7□□□□□ -0.54
PABPC1-222ENST00000523555 SLURP2P0DP57 97 aa11.7□□□□□ -0.54
PABPC1-222ENST00000523555 GJA5P36382 358 aa11.7□□□□□ -0.54
PABPC1-222ENST00000523555 ZAP70P43403 619 aa11.7□□□□□ -0.54
PABPC1-222ENST00000523555 CTCFP49711 727 aaPredicted RBP11.7□□□□□ -0.54
PABPC1-222ENST00000523555 TCP10Q12799 353 aa11.7□□□□□ -0.54
PABPC1-222ENST00000523555 TNFAIP1Q13829 316 aa11.7□□□□□ -0.54
PABPC1-222ENST00000523555 ERICH6Q7L0X2 663 aa11.7□□□□□ -0.54
PABPC1-222ENST00000523555 DZIP1Q86YF9 867 aaKnown RBP11.7□□□□□ -0.54
PABPC1-222ENST00000523555 CCDC102AQ96A19 550 aa11.7□□□□□ -0.54
PABPC1-222ENST00000523555 AIDAQ96BJ3 306 aa11.7□□□□□ -0.54
PABPC1-222ENST00000523555 NSUN4Q96CB9 384 aaKnown RBP11.7□□□□□ -0.54
PABPC1-222ENST00000523555 BCL11AQ9H165 835 aa11.7□□□□□ -0.54
PABPC1-222ENST00000523555 USP40Q9NVE5 1235 aa11.7□□□□□ -0.54
PABPC1-222ENST00000523555 MROH7-TTC4A0A0A0MT08 1334 aa11.69□□□□□ -0.54
PABPC1-222ENST00000523555 MYH7P12883 1935 aa11.69□□□□□ -0.54
PABPC1-222ENST00000523555 UQCRFS1P1P0C7P4 283 aa11.69□□□□□ -0.54
PABPC1-222ENST00000523555 BTDP43251 543 aa11.69□□□□□ -0.54
PABPC1-222ENST00000523555 SUPT20HL1Q3ZLR7 823 aa11.69□□□□□ -0.54
PABPC1-222ENST00000523555 CCDC158Q5M9N0 1113 aa11.69□□□□□ -0.54
PABPC1-222ENST00000523555 FAM83AQ86UY5 434 aa11.69□□□□□ -0.54
PABPC1-222ENST00000523555 AACSQ86V21 672 aa11.69□□□□□ -0.54
PABPC1-222ENST00000523555 ZGPATQ8N5A5 531 aaKnown RBP11.69□□□□□ -0.54
PABPC1-222ENST00000523555 CNKSR2Q8WXI2 1034 aa11.69□□□□□ -0.54
PABPC1-222ENST00000523555 DDX4Q9NQI0 724 aaKnown RBP11.69□□□□□ -0.54
PABPC1-222ENST00000523555 PIH1D3Q9NQM4 214 aaKnown RBP11.69□□□□□ -0.54
PABPC1-222ENST00000523555 RPAP1Q9BWH6 1393 aaPredicted RBP11.68□□□□□ -0.54
PABPC1-222ENST00000523555 ATAD5Q96QE3 1844 aa11.68□□□□□ -0.54
PABPC1-222ENST00000523555 SMARCA5O60264 1052 aaPredicted RBP11.68□□□□□ -0.54
PABPC1-222ENST00000523555 WDHD1O75717 1129 aaPredicted RBP11.68□□□□□ -0.54
PABPC1-222ENST00000523555 TNNI2P48788 182 aa11.68□□□□□ -0.54
PABPC1-222ENST00000523555 RHBDL3P58872 404 aa11.68□□□□□ -0.54
PABPC1-222ENST00000523555 FKBP1CQ5VVH2 108 aa11.68□□□□□ -0.54
PABPC1-222ENST00000523555 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.68□□□□□ -0.54
PABPC1-222ENST00000523555 SH3BP5LQ7L8J4 393 aa11.68□□□□□ -0.54
PABPC1-222ENST00000523555 ADGRA1Q86SQ6 560 aa11.68□□□□□ -0.54
PABPC1-222ENST00000523555 ERC1Q8IUD2 1116 aa11.68□□□□□ -0.54
PABPC1-222ENST00000523555 FAM163AQ96GL9 167 aaPredicted RBP11.68□□□□□ -0.54
PABPC1-222ENST00000523555 ZNF512BQ96KM6 892 aaPredicted RBP11.68□□□□□ -0.54
PABPC1-222ENST00000523555 CRBNQ96SW2 442 aa11.68□□□□□ -0.54
PABPC1-222ENST00000523555 ANTXR1Q9H6X2 564 aa11.68□□□□□ -0.54
PABPC1-222ENST00000523555 TMOD2Q9NZR1 351 aa11.68□□□□□ -0.54
PABPC1-222ENST00000523555 RAI14Q9P0K7 980 aa11.68□□□□□ -0.54
PABPC1-222ENST00000523555 PCDHB15Q9Y5E8 787 aa11.68□□□□□ -0.54
PABPC1-222ENST00000523555 PHIPQ8WWQ0 1821 aa11.67□□□□□ -0.54
PABPC1-222ENST00000523555 MYH1P12882 1939 aa11.67□□□□□ -0.54
PABPC1-222ENST00000523555 GPR75-ASB3A0A0A6YYF3 556 aa11.67□□□□□ -0.54
PABPC1-222ENST00000523555 PPP1R12BO60237 982 aaPredicted RBP11.67□□□□□ -0.54
PABPC1-222ENST00000523555 HMMRO75330 724 aa11.67□□□□□ -0.54
PABPC1-222ENST00000523555 RGS3P49796 1198 aa11.67□□□□□ -0.54
PABPC1-222ENST00000523555 SPRYD7Q5W111 196 aa11.67□□□□□ -0.54
PABPC1-222ENST00000523555 SPTY2D1Q68D10 685 aaPredicted RBP11.67□□□□□ -0.54
PABPC1-222ENST00000523555 MIGA2Q7L4E1 593 aa11.67□□□□□ -0.54
PABPC1-222ENST00000523555 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.67□□□□□ -0.54
PABPC1-222ENST00000523555 FAM151AQ8WW52 585 aa11.67□□□□□ -0.54
PABPC1-222ENST00000523555 KIF1BPQ96EK5 621 aa11.67□□□□□ -0.54
PABPC1-222ENST00000523555 WNK4Q96J92 1243 aa11.67□□□□□ -0.54
PABPC1-222ENST00000523555 ELP3Q9H9T3 547 aa11.67□□□□□ -0.54
PABPC1-222ENST00000523555 RNF186Q9NXI6 227 aa11.67□□□□□ -0.54
PABPC1-222ENST00000523555 ATRNL1Q5VV63 1379 aa11.67□□□□□ -0.54
PABPC1-222ENST00000523555 DOCK1Q14185 1865 aa11.66□□□□□ -0.54
PABPC1-222ENST00000523555 DDTLA6NHG4 134 aaPredicted RBP11.66□□□□□ -0.54
PABPC1-222ENST00000523555 TRPA1O75762 1119 aa11.66□□□□□ -0.54
PABPC1-222ENST00000523555 IREB2P48200 963 aaKnown RBP11.66□□□□□ -0.54
PABPC1-222ENST00000523555 PICALMQ13492 652 aa11.66□□□□□ -0.54
PABPC1-222ENST00000523555 VGLL4Q14135 290 aa11.66□□□□□ -0.54
PABPC1-222ENST00000523555 HSP90AB4PQ58FF6 505 aa11.66□□□□□ -0.54
PABPC1-222ENST00000523555 ANKRD13AQ8IZ07 590 aa11.66□□□□□ -0.54
PABPC1-222ENST00000523555 SLC10A4Q96EP9 437 aa11.66□□□□□ -0.54
PABPC1-222ENST00000523555 EDC3Q96F86 508 aaKnown RBP11.66□□□□□ -0.54
PABPC1-222ENST00000523555 BEGAINQ9BUH8 593 aa11.66□□□□□ -0.54
PABPC1-222ENST00000523555 IDI2Q9BXS1 227 aa11.66□□□□□ -0.54
PABPC1-222ENST00000523555 PRDM10Q9NQV6 1147 aa11.66□□□□□ -0.54
PABPC1-222ENST00000523555 LRP2BPQ9P2M1 347 aa11.66□□□□□ -0.54
PABPC1-222ENST00000523555 PTPRFP10586 1907 aa11.66□□□□□ -0.54
PABPC1-222ENST00000523555 INPP5BP32019 993 aa11.65□□□□□ -0.54
PABPC1-222ENST00000523555 SH3RF3Q8TEJ3 882 aaPredicted RBP11.65□□□□□ -0.54
PABPC1-222ENST00000523555 ZKSCAN4Q969J2 545 aaPredicted RBP11.65□□□□□ -0.54
PABPC1-222ENST00000523555 OPTNQ96CV9 577 aa11.65□□□□□ -0.54
PABPC1-222ENST00000523555 WRNIP1Q96S55 665 aa11.65□□□□□ -0.54
PABPC1-222ENST00000523555 R3HDMLQ9H3Y0 253 aa11.65□□□□□ -0.54
PABPC1-222ENST00000523555 CHMP4BQ9H444 224 aaKnown RBP11.65□□□□□ -0.54
PABPC1-222ENST00000523555 SNCAIPQ9Y6H5 919 aa11.65□□□□□ -0.54
PABPC1-222ENST00000523555 NAV1Q8NEY1 1877 aa11.64□□□□□ -0.55
PABPC1-222ENST00000523555 DDX60LQ5H9U9 1706 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms