RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 HSP90AB4PQ58FF6 505 aa21.23■□□□□ 0.99
CCNC-213ENST00000523541 CEP85Q6P2H3 762 aa21.23■□□□□ 0.99
CCNC-213ENST00000523541 TNNI3KQ59H18 835 aa21.22■□□□□ 0.99
CCNC-213ENST00000523541 CCDC158Q5M9N0 1113 aa21.22■□□□□ 0.99
CCNC-213ENST00000523541 ERC1Q8IUD2 1116 aa21.22■□□□□ 0.99
CCNC-213ENST00000523541 CLMNQ96JQ2 1002 aa21.22■□□□□ 0.99
CCNC-213ENST00000523541 ZNF512BQ96KM6 892 aaPredicted RBP21.22■□□□□ 0.99
CCNC-213ENST00000523541 TMEM39BQ9GZU3 492 aa21.22■□□□□ 0.99
CCNC-213ENST00000523541 C1orf115Q9H7X2 142 aa21.22■□□□□ 0.99
CCNC-213ENST00000523541 DAGLAQ9Y4D2 1042 aa21.22■□□□□ 0.99
CCNC-213ENST00000523541 FPGT-TNNI3KV9GXZ4 949 aa21.22■□□□□ 0.99
CCNC-213ENST00000523541 SSC5DA1L4H1 1573 aa21.22■□□□□ 0.99
CCNC-213ENST00000523541 MAP4K4O95819 1239 aaPredicted RBP21.21■□□□□ 0.99
CCNC-213ENST00000523541 SPRYD7Q5W111 196 aa21.21■□□□□ 0.99
CCNC-213ENST00000523541 SPATA5Q8NB90 893 aa21.21■□□□□ 0.99
CCNC-213ENST00000523541 FAM151AQ8WW52 585 aa21.21■□□□□ 0.99
CCNC-213ENST00000523541 ZBTB40Q9NUA8 1239 aa21.21■□□□□ 0.99
CCNC-213ENST00000523541 HMG20BQ9P0W2 317 aa21.21■□□□□ 0.99
CCNC-213ENST00000523541 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.21■□□□□ 0.99
CCNC-213ENST00000523541 CCDC85CA6NKD9 419 aa21.2■□□□□ 0.98
CCNC-213ENST00000523541 HMMRO75330 724 aa21.2■□□□□ 0.98
CCNC-213ENST00000523541 ERICH6Q7L0X2 663 aa21.2■□□□□ 0.98
CCNC-213ENST00000523541 MCOLN1Q9GZU1 580 aa21.2■□□□□ 0.98
CCNC-213ENST00000523541 ABCF2Q9UG63 623 aa21.2■□□□□ 0.98
CCNC-213ENST00000523541 MANSC4A6NHS7 340 aaPredicted RBP21.19■□□□□ 0.98
CCNC-213ENST00000523541 TBC1D8O95759 1140 aa21.19■□□□□ 0.98
CCNC-213ENST00000523541 LDHCP07864 332 aa21.19■□□□□ 0.98
CCNC-213ENST00000523541 GSTO1P78417 241 aa21.19■□□□□ 0.98
CCNC-213ENST00000523541 DIXDC1Q155Q3 683 aa21.19■□□□□ 0.98
CCNC-213ENST00000523541 CDC42EP5Q6NZY7 148 aa21.19■□□□□ 0.98
CCNC-213ENST00000523541 DZIP1Q86YF9 867 aaKnown RBP21.19■□□□□ 0.98
CCNC-213ENST00000523541 WNK4Q96J92 1243 aa21.19■□□□□ 0.98
CCNC-213ENST00000523541 GAKO14976 1311 aa21.19■□□□□ 0.98
CCNC-213ENST00000523541 RPAP1Q9BWH6 1393 aaPredicted RBP21.19■□□□□ 0.98
CCNC-213ENST00000523541 ALDH1A1P00352 501 aa21.18■□□□□ 0.98
CCNC-213ENST00000523541 MAP3K9P80192 1104 aa21.18■□□□□ 0.98
CCNC-213ENST00000523541 DCAF15Q66K64 600 aa21.18■□□□□ 0.98
CCNC-213ENST00000523541 IDI2Q9BXS1 227 aa21.18■□□□□ 0.98
CCNC-213ENST00000523541 ELP3Q9H9T3 547 aa21.18■□□□□ 0.98
CCNC-213ENST00000523541 USP40Q9NVE5 1235 aa21.18■□□□□ 0.98
CCNC-213ENST00000523541 COG6Q9Y2V7 657 aa21.18■□□□□ 0.98
CCNC-213ENST00000523541 NOM1Q5C9Z4 860 aaKnown RBP21.17■□□□□ 0.98
CCNC-213ENST00000523541 CDAN1Q8IWY9 1227 aa21.17■□□□□ 0.98
CCNC-213ENST00000523541 CFHR5Q9BXR6 569 aa21.17■□□□□ 0.98
CCNC-213ENST00000523541 CSADQ9Y600 493 aa21.17■□□□□ 0.98
CCNC-213ENST00000523541 ENTPD3O75355 529 aa21.16■□□□□ 0.98
CCNC-213ENST00000523541 TTC39AQ5SRH9 613 aa21.16■□□□□ 0.98
CCNC-213ENST00000523541 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.16■□□□□ 0.98
CCNC-213ENST00000523541 GPR75-ASB3A0A0A6YYF3 556 aa21.15■□□□□ 0.98
CCNC-213ENST00000523541 NPM3O75607 178 aaKnown RBP21.15■□□□□ 0.98
CCNC-213ENST00000523541 MCAMP43121 646 aa21.15■□□□□ 0.98
CCNC-213ENST00000523541 MECOMQ03112 1051 aa21.15■□□□□ 0.98
CCNC-213ENST00000523541 DBNDD2Q9BQY9 259 aa21.15■□□□□ 0.98
CCNC-213ENST00000523541 MROH7-TTC4A0A0A0MT08 1334 aa21.14■□□□□ 0.97
CCNC-213ENST00000523541 TCP10Q12799 353 aa21.14■□□□□ 0.97
CCNC-213ENST00000523541 OTUD7BQ6GQQ9 843 aa21.14■□□□□ 0.97
CCNC-213ENST00000523541 TMED8Q6PL24 325 aaPredicted RBP21.14■□□□□ 0.97
CCNC-213ENST00000523541 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.14■□□□□ 0.97
CCNC-213ENST00000523541 NSUN4Q96CB9 384 aaKnown RBP21.14■□□□□ 0.97
CCNC-213ENST00000523541 OPTNQ96CV9 577 aa21.14■□□□□ 0.97
CCNC-213ENST00000523541 TESPA1A2RU30 521 aaPredicted RBP21.13■□□□□ 0.97
CCNC-213ENST00000523541 RAB11FIP3O75154 756 aa21.13■□□□□ 0.97
CCNC-213ENST00000523541 EAF2Q96CJ1 260 aaPredicted RBP21.13■□□□□ 0.97
CCNC-213ENST00000523541 ZNF341Q9BYN7 854 aa21.13■□□□□ 0.97
CCNC-213ENST00000523541 LRP2BPQ9P2M1 347 aa21.13■□□□□ 0.97
CCNC-213ENST00000523541 CTU1Q7Z7A3 348 aaKnown RBP21.12■□□□□ 0.97
CCNC-213ENST00000523541 IFNL1Q8IU54 200 aa21.12■□□□□ 0.97
CCNC-213ENST00000523541 ZNF296Q8WUU4 475 aaPredicted RBP21.12■□□□□ 0.97
CCNC-213ENST00000523541 KIF1BPQ96EK5 621 aa21.12■□□□□ 0.97
CCNC-213ENST00000523541 WRNIP1Q96S55 665 aa21.12■□□□□ 0.97
CCNC-213ENST00000523541 RAI14Q9P0K7 980 aa21.12■□□□□ 0.97
CCNC-213ENST00000523541 FAM198AQ9UFP1 575 aa21.12■□□□□ 0.97
CCNC-213ENST00000523541 DBNLQ9UJU6 430 aaKnown RBP21.12■□□□□ 0.97
CCNC-213ENST00000523541 GPR25O00155 361 aa21.11■□□□□ 0.97
CCNC-213ENST00000523541 NFIAQ12857 509 aa21.11■□□□□ 0.97
CCNC-213ENST00000523541 VGLL4Q14135 290 aa21.11■□□□□ 0.97
CCNC-213ENST00000523541 RHPN1Q8TCX5 695 aa21.11■□□□□ 0.97
CCNC-213ENST00000523541 ZNF112Q9UJU3 913 aa21.11■□□□□ 0.97
CCNC-213ENST00000523541 EXOC6BQ9Y2D4 811 aa21.11■□□□□ 0.97
CCNC-213ENST00000523541 OTOFQ9HC10 1997 aa21.1■□□□□ 0.97
CCNC-213ENST00000523541 BTDP43251 543 aa21.1■□□□□ 0.97
CCNC-213ENST00000523541 MAP3K10Q02779 954 aa21.1■□□□□ 0.97
CCNC-213ENST00000523541 PI16Q6UXB8 463 aa21.1■□□□□ 0.97
CCNC-213ENST00000523541 TBC1D9Q6ZT07 1266 aa21.1■□□□□ 0.97
CCNC-213ENST00000523541 MIGA2Q7L4E1 593 aa21.1■□□□□ 0.97
CCNC-213ENST00000523541 ERO1BQ86YB8 467 aa21.1■□□□□ 0.97
CCNC-213ENST00000523541 CLASRPQ8N2M8 674 aaKnown RBP21.1■□□□□ 0.97
CCNC-213ENST00000523541 OTUD5Q96G74 571 aa21.1■□□□□ 0.97
CCNC-213ENST00000523541 CCDC8Q9H0W5 538 aaPredicted RBP21.1■□□□□ 0.97
CCNC-213ENST00000523541 AK9Q5TCS8 1911 aa21.1■□□□□ 0.97
CCNC-213ENST00000523541 FKTNO75072 461 aa21.09■□□□□ 0.97
CCNC-213ENST00000523541 BAG3O95817 575 aa21.09■□□□□ 0.97
CCNC-213ENST00000523541 GJA5P36382 358 aa21.09■□□□□ 0.97
CCNC-213ENST00000523541 RGS3P49796 1198 aa21.09■□□□□ 0.97
CCNC-213ENST00000523541 GTF2A2P52657 109 aa21.09■□□□□ 0.97
CCNC-213ENST00000523541 ZSCAN29Q8IWY8 852 aaPredicted RBP21.09■□□□□ 0.97
CCNC-213ENST00000523541 SIRT2Q8IXJ6 389 aa21.09■□□□□ 0.97
CCNC-213ENST00000523541 ZNF384Q8TF68 577 aa21.09■□□□□ 0.97
CCNC-213ENST00000523541 NOL10Q9BSC4 688 aaKnown RBP21.09■□□□□ 0.97
CCNC-213ENST00000523541 SPDYE5A6NIY4 337 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms