RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 OTUD7BQ6GQQ9 843 aa13.45□□□□□ -0.26
PVT1-216ENST00000523068 DAGLAQ9Y4D2 1042 aa13.45□□□□□ -0.26
PVT1-216ENST00000523068 CSADQ9Y600 493 aa13.45□□□□□ -0.26
PVT1-216ENST00000523068 DOCK2Q92608 1830 aa13.44□□□□□ -0.26
PVT1-216ENST00000523068 CCDC85CA6NKD9 419 aa13.44□□□□□ -0.26
PVT1-216ENST00000523068 MS4A1P11836 297 aa13.44□□□□□ -0.26
PVT1-216ENST00000523068 MAP3K9P80192 1104 aa13.44□□□□□ -0.26
PVT1-216ENST00000523068 RASGRF1Q13972 1273 aa13.44□□□□□ -0.26
PVT1-216ENST00000523068 DIXDC1Q155Q3 683 aa13.44□□□□□ -0.26
PVT1-216ENST00000523068 DZIP1Q86YF9 867 aaKnown RBP13.44□□□□□ -0.26
PVT1-216ENST00000523068 IFNL1Q8IU54 200 aa13.44□□□□□ -0.26
PVT1-216ENST00000523068 CDAN1Q8IWY9 1227 aa13.44□□□□□ -0.26
PVT1-216ENST00000523068 FAM151AQ8WW52 585 aa13.44□□□□□ -0.26
PVT1-216ENST00000523068 OPTNQ96CV9 577 aa13.44□□□□□ -0.26
PVT1-216ENST00000523068 ELP3Q9H9T3 547 aa13.44□□□□□ -0.26
PVT1-216ENST00000523068 ABCF2Q9UG63 623 aa13.44□□□□□ -0.26
PVT1-216ENST00000523068 ZBTB7BO15156 539 aaPredicted RBP13.43□□□□□ -0.26
PVT1-216ENST00000523068 ATP8B2P98198 1209 aa13.43□□□□□ -0.26
PVT1-216ENST00000523068 OS9Q13438 667 aaPredicted RBP13.43□□□□□ -0.26
PVT1-216ENST00000523068 POLA2Q14181 598 aa13.43□□□□□ -0.26
PVT1-216ENST00000523068 CDC42EP5Q6NZY7 148 aa13.43□□□□□ -0.26
PVT1-216ENST00000523068 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.43□□□□□ -0.26
PVT1-216ENST00000523068 CTU1Q7Z7A3 348 aaKnown RBP13.43□□□□□ -0.26
PVT1-216ENST00000523068 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.43□□□□□ -0.26
PVT1-216ENST00000523068 SSH3Q8TE77 659 aa13.43□□□□□ -0.26
PVT1-216ENST00000523068 GPR25O00155 361 aa13.42□□□□□ -0.26
PVT1-216ENST00000523068 RLBP1P12271 317 aa13.42□□□□□ -0.26
PVT1-216ENST00000523068 VGLL4Q14135 290 aa13.42□□□□□ -0.26
PVT1-216ENST00000523068 PKN2Q16513 984 aaKnown RBP13.42□□□□□ -0.26
PVT1-216ENST00000523068 ERICH6Q7L0X2 663 aa13.42□□□□□ -0.26
PVT1-216ENST00000523068 ZNF296Q8WUU4 475 aaPredicted RBP13.42□□□□□ -0.26
PVT1-216ENST00000523068 WRNIP1Q96S55 665 aa13.42□□□□□ -0.26
PVT1-216ENST00000523068 GPR108Q9NPR9 543 aa13.42□□□□□ -0.26
PVT1-216ENST00000523068 USP40Q9NVE5 1235 aa13.42□□□□□ -0.26
PVT1-216ENST00000523068 GAKO14976 1311 aa13.41□□□□□ -0.26
PVT1-216ENST00000523068 TESPA1A2RU30 521 aaPredicted RBP13.41□□□□□ -0.26
PVT1-216ENST00000523068 FKTNO75072 461 aa13.41□□□□□ -0.26
PVT1-216ENST00000523068 UQCRFS1P1P0C7P4 283 aa13.41□□□□□ -0.26
PVT1-216ENST00000523068 ARID4AP29374 1257 aaPredicted RBP13.41□□□□□ -0.26
PVT1-216ENST00000523068 GJA5P36382 358 aa13.41□□□□□ -0.26
PVT1-216ENST00000523068 GTF2A2P52657 109 aa13.41□□□□□ -0.26
PVT1-216ENST00000523068 TCP10Q12799 353 aa13.41□□□□□ -0.26
PVT1-216ENST00000523068 SPATA5Q8NB90 893 aa13.41□□□□□ -0.26
PVT1-216ENST00000523068 FAM163AQ96GL9 167 aaPredicted RBP13.41□□□□□ -0.26
PVT1-216ENST00000523068 ZNF341Q9BYN7 854 aa13.41□□□□□ -0.26
PVT1-216ENST00000523068 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.41□□□□□ -0.26
PVT1-216ENST00000523068 MAST2Q6P0Q8 1798 aa13.4□□□□□ -0.26
PVT1-216ENST00000523068 SPDYE5A6NIY4 337 aa13.4□□□□□ -0.26
PVT1-216ENST00000523068 IGF2BP3O00425 579 aaKnown RBP eCLIP13.4□□□□□ -0.26
PVT1-216ENST00000523068 SURF6O75683 361 aaKnown RBP13.4□□□□□ -0.26
PVT1-216ENST00000523068 GSTO1P78417 241 aa13.4□□□□□ -0.26
PVT1-216ENST00000523068 ERO1BQ86YB8 467 aa13.4□□□□□ -0.26
PVT1-216ENST00000523068 C1orf115Q9H7X2 142 aa13.4□□□□□ -0.26
PVT1-216ENST00000523068 HMG20BQ9P0W2 317 aa13.4□□□□□ -0.26
PVT1-216ENST00000523068 MROH7-TTC4A0A0A0MT08 1334 aa13.39□□□□□ -0.27
PVT1-216ENST00000523068 ENTPD3O75355 529 aa13.39□□□□□ -0.27
PVT1-216ENST00000523068 LDHCP07864 332 aa13.39□□□□□ -0.27
PVT1-216ENST00000523068 NFIAQ12857 509 aa13.39□□□□□ -0.27
PVT1-216ENST00000523068 TNNI3KQ59H18 835 aa13.39□□□□□ -0.27
PVT1-216ENST00000523068 CCDC158Q5M9N0 1113 aa13.39□□□□□ -0.27
PVT1-216ENST00000523068 TTC39AQ5SRH9 613 aa13.39□□□□□ -0.27
PVT1-216ENST00000523068 MIGA2Q7L4E1 593 aa13.39□□□□□ -0.27
PVT1-216ENST00000523068 ZKSCAN4Q969J2 545 aaPredicted RBP13.39□□□□□ -0.27
PVT1-216ENST00000523068 OTUD5Q96G74 571 aa13.39□□□□□ -0.27
PVT1-216ENST00000523068 MS4A4AQ96JQ5 239 aa13.39□□□□□ -0.27
PVT1-216ENST00000523068 IDI2Q9BXS1 227 aa13.39□□□□□ -0.27
PVT1-216ENST00000523068 FAM198AQ9UFP1 575 aa13.39□□□□□ -0.27
PVT1-216ENST00000523068 NOP58Q9Y2X3 529 aaKnown RBP13.39□□□□□ -0.27
PVT1-216ENST00000523068 FPGT-TNNI3KV9GXZ4 949 aa13.39□□□□□ -0.27
PVT1-216ENST00000523068 WDHD1O75717 1129 aaPredicted RBP13.38□□□□□ -0.27
PVT1-216ENST00000523068 MAP4K4O95819 1239 aaPredicted RBP13.38□□□□□ -0.27
PVT1-216ENST00000523068 MCAMP43121 646 aa13.38□□□□□ -0.27
PVT1-216ENST00000523068 BTDP43251 543 aa13.38□□□□□ -0.27
PVT1-216ENST00000523068 MECOMQ03112 1051 aa13.38□□□□□ -0.27
PVT1-216ENST00000523068 PANK1Q8TE04 598 aa13.38□□□□□ -0.27
PVT1-216ENST00000523068 CNKSR2Q8WXI2 1034 aa13.38□□□□□ -0.27
PVT1-216ENST00000523068 R3HDMLQ9H3Y0 253 aa13.38□□□□□ -0.27
PVT1-216ENST00000523068 CHMP4BQ9H444 224 aaKnown RBP13.38□□□□□ -0.27
PVT1-216ENST00000523068 SNCAIPQ9Y6H5 919 aa13.38□□□□□ -0.27
PVT1-216ENST00000523068 MYO5AQ9Y4I1 1855 aaKnown RBP13.38□□□□□ -0.27
PVT1-216ENST00000523068 GPR75-ASB3A0A0A6YYF3 556 aa13.37□□□□□ -0.27
PVT1-216ENST00000523068 CCL15-CCL14A0A0B4J2E2 113 aa13.37□□□□□ -0.27
PVT1-216ENST00000523068 IGSF3O75054 1194 aa13.37□□□□□ -0.27
PVT1-216ENST00000523068 CETPP11597 493 aa13.37□□□□□ -0.27
PVT1-216ENST00000523068 RGS3P49796 1198 aa13.37□□□□□ -0.27
PVT1-216ENST00000523068 PPATQ06203 517 aa13.37□□□□□ -0.27
PVT1-216ENST00000523068 CRHR2Q13324 411 aa13.37□□□□□ -0.27
PVT1-216ENST00000523068 PPIL2Q13356 520 aa13.37□□□□□ -0.27
PVT1-216ENST00000523068 SNAPC2Q13487 334 aa13.37□□□□□ -0.27
PVT1-216ENST00000523068 CCL15Q16663 113 aa13.37□□□□□ -0.27
PVT1-216ENST00000523068 CEP85Q6P2H3 762 aa13.37□□□□□ -0.27
PVT1-216ENST00000523068 PI16Q6UXB8 463 aa13.37□□□□□ -0.27
PVT1-216ENST00000523068 ERC1Q8IUD2 1116 aa13.37□□□□□ -0.27
PVT1-216ENST00000523068 NSUN4Q96CB9 384 aaKnown RBP13.37□□□□□ -0.27
PVT1-216ENST00000523068 PTPN18Q99952 460 aa13.37□□□□□ -0.27
PVT1-216ENST00000523068 NOL10Q9BSC4 688 aaKnown RBP13.37□□□□□ -0.27
PVT1-216ENST00000523068 RAI14Q9P0K7 980 aa13.37□□□□□ -0.27
PVT1-216ENST00000523068 LRP2BPQ9P2M1 347 aa13.37□□□□□ -0.27
PVT1-216ENST00000523068 ZNF112Q9UJU3 913 aa13.37□□□□□ -0.27
PVT1-216ENST00000523068 RFX7Q2KHR2 1363 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms