RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 ANGEL1Q9UNK9 670 aaKnown RBP21.9■■□□□ 1.1
CLK4-211ENST00000522556 RFX7Q2KHR2 1363 aa21.89■■□□□ 1.1
CLK4-211ENST00000522556 ZNF157P51786 506 aaPredicted RBP21.89■■□□□ 1.09
CLK4-211ENST00000522556 RASAL3Q86YV0 1011 aa21.89■■□□□ 1.09
CLK4-211ENST00000522556 NSUN4Q96CB9 384 aaKnown RBP21.89■■□□□ 1.09
CLK4-211ENST00000522556 ZNF512BQ96KM6 892 aaPredicted RBP21.89■■□□□ 1.09
CLK4-211ENST00000522556 ANTXR1Q9H6X2 564 aa21.89■■□□□ 1.09
CLK4-211ENST00000522556 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.89■■□□□ 1.09
CLK4-211ENST00000522556 MROH7-TTC4A0A0A0MT08 1334 aa21.88■■□□□ 1.09
CLK4-211ENST00000522556 RAB11FIP3O75154 756 aa21.88■■□□□ 1.09
CLK4-211ENST00000522556 SLC10A3P09131 477 aa21.88■■□□□ 1.09
CLK4-211ENST00000522556 NF2P35240 595 aa21.88■■□□□ 1.09
CLK4-211ENST00000522556 FKBP1BP68106 108 aa21.88■■□□□ 1.09
CLK4-211ENST00000522556 TCP10Q12799 353 aa21.88■■□□□ 1.09
CLK4-211ENST00000522556 TNFAIP1Q13829 316 aa21.88■■□□□ 1.09
CLK4-211ENST00000522556 ZFPM1Q8IX07 1006 aa21.88■■□□□ 1.09
CLK4-211ENST00000522556 CLMNQ96JQ2 1002 aa21.88■■□□□ 1.09
CLK4-211ENST00000522556 RAI14Q9P0K7 980 aa21.88■■□□□ 1.09
CLK4-211ENST00000522556 FAM198AQ9UFP1 575 aa21.88■■□□□ 1.09
CLK4-211ENST00000522556 CDK5RAP2Q96SN8 1893 aa21.88■■□□□ 1.09
CLK4-211ENST00000522556 FOXN1O15353 648 aa21.87■■□□□ 1.09
CLK4-211ENST00000522556 BTDP43251 543 aa21.87■■□□□ 1.09
CLK4-211ENST00000522556 SPTY2D1Q68D10 685 aaPredicted RBP21.87■■□□□ 1.09
CLK4-211ENST00000522556 ADGRA1Q86SQ6 560 aa21.87■■□□□ 1.09
CLK4-211ENST00000522556 CLASRPQ8N2M8 674 aaKnown RBP21.87■■□□□ 1.09
CLK4-211ENST00000522556 USP40Q9NVE5 1235 aa21.87■■□□□ 1.09
CLK4-211ENST00000522556 WBP1LQ9NX94 342 aa21.87■■□□□ 1.09
CLK4-211ENST00000522556 TMOD2Q9NZR1 351 aa21.87■■□□□ 1.09
CLK4-211ENST00000522556 SUPT16HQ9Y5B9 1047 aaKnown RBP21.87■■□□□ 1.09
CLK4-211ENST00000522556 USP2O75604 605 aaPredicted RBP21.86■■□□□ 1.09
CLK4-211ENST00000522556 MKRN3Q13064 507 aaKnown RBP21.86■■□□□ 1.09
CLK4-211ENST00000522556 LDLRAD1Q5T700 205 aa21.86■■□□□ 1.09
CLK4-211ENST00000522556 DCTPP1Q9H773 170 aa21.86■■□□□ 1.09
CLK4-211ENST00000522556 LRP2BPQ9P2M1 347 aa21.86■■□□□ 1.09
CLK4-211ENST00000522556 AK9Q5TCS8 1911 aa21.86■■□□□ 1.09
CLK4-211ENST00000522556 RHBDL3P58872 404 aa21.85■■□□□ 1.09
CLK4-211ENST00000522556 EDC3Q96F86 508 aaKnown RBP21.85■■□□□ 1.09
CLK4-211ENST00000522556 FAM163AQ96GL9 167 aaPredicted RBP21.85■■□□□ 1.09
CLK4-211ENST00000522556 DDX4Q9NQI0 724 aaKnown RBP21.85■■□□□ 1.09
CLK4-211ENST00000522556 WDHD1O75717 1129 aaPredicted RBP21.84■■□□□ 1.09
CLK4-211ENST00000522556 IFIT2P09913 472 aaKnown RBP21.84■■□□□ 1.09
CLK4-211ENST00000522556 SLURP2P0DP57 97 aa21.84■■□□□ 1.09
CLK4-211ENST00000522556 TNNI2P48788 182 aa21.84■■□□□ 1.09
CLK4-211ENST00000522556 ARMC9Q7Z3E5 817 aa21.84■■□□□ 1.09
CLK4-211ENST00000522556 FAM83AQ86UY5 434 aa21.84■■□□□ 1.09
CLK4-211ENST00000522556 EXOC6Q8TAG9 804 aa21.84■■□□□ 1.09
CLK4-211ENST00000522556 LRRCC1Q9C099 1032 aa21.84■■□□□ 1.09
CLK4-211ENST00000522556 RPAP1Q9BWH6 1393 aaPredicted RBP21.84■■□□□ 1.09
CLK4-211ENST00000522556 GPR75-ASB3A0A0A6YYF3 556 aa21.83■■□□□ 1.09
CLK4-211ENST00000522556 RGS3P49796 1198 aa21.83■■□□□ 1.09
CLK4-211ENST00000522556 KIF23Q02241 960 aaPredicted RBP21.83■■□□□ 1.09
CLK4-211ENST00000522556 NOGQ13253 232 aa21.83■■□□□ 1.09
CLK4-211ENST00000522556 MAP3K11Q16584 847 aa21.83■■□□□ 1.09
CLK4-211ENST00000522556 SUPT20HL1Q3ZLR7 823 aa21.83■■□□□ 1.09
CLK4-211ENST00000522556 FKBP1CQ5VVH2 108 aa21.83■■□□□ 1.09
CLK4-211ENST00000522556 TSKSQ9UJT2 592 aa21.83■■□□□ 1.09
CLK4-211ENST00000522556 MAP2K2P36507 400 aa21.82■■□□□ 1.08
CLK4-211ENST00000522556 FOCADQ5VW36 1801 aa21.82■■□□□ 1.08
CLK4-211ENST00000522556 PPP1R12BO60237 982 aaPredicted RBP21.81■■□□□ 1.08
CLK4-211ENST00000522556 IDH1O75874 414 aaKnown RBP21.81■■□□□ 1.08
CLK4-211ENST00000522556 IRX6P78412 446 aaPredicted RBP21.81■■□□□ 1.08
CLK4-211ENST00000522556 PICALMQ13492 652 aa21.81■■□□□ 1.08
CLK4-211ENST00000522556 TSHZ3Q63HK5 1081 aa21.81■■□□□ 1.08
CLK4-211ENST00000522556 NAA16Q6N069 864 aaPredicted RBP21.81■■□□□ 1.08
CLK4-211ENST00000522556 SH3BP5LQ7L8J4 393 aa21.81■■□□□ 1.08
CLK4-211ENST00000522556 FAM151AQ8WW52 585 aa21.81■■□□□ 1.08
CLK4-211ENST00000522556 CCDC102AQ96A19 550 aa21.81■■□□□ 1.08
CLK4-211ENST00000522556 DNAJC2Q99543 621 aaKnown RBP21.81■■□□□ 1.08
CLK4-211ENST00000522556 LAMB1P07942 1786 aa21.81■■□□□ 1.08
CLK4-211ENST00000522556 SIPA1L1O43166 1804 aa21.8■■□□□ 1.08
CLK4-211ENST00000522556 ATRNL1Q5VV63 1379 aa21.8■■□□□ 1.08
CLK4-211ENST00000522556 GJA5P36382 358 aa21.8■■□□□ 1.08
CLK4-211ENST00000522556 MIGA2Q7L4E1 593 aa21.8■■□□□ 1.08
CLK4-211ENST00000522556 SLF2Q8IX21 1173 aa21.8■■□□□ 1.08
CLK4-211ENST00000522556 CNKSR2Q8WXI2 1034 aa21.8■■□□□ 1.08
CLK4-211ENST00000522556 IDI2Q9BXS1 227 aa21.8■■□□□ 1.08
CLK4-211ENST00000522556 AATFQ9NY61 560 aaKnown RBP eCLIP21.8■■□□□ 1.08
CLK4-211ENST00000522556 GSTO1P78417 241 aa21.79■■□□□ 1.08
CLK4-211ENST00000522556 MAP2K1Q02750 393 aaPredicted RBP21.79■■□□□ 1.08
CLK4-211ENST00000522556 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.79■■□□□ 1.08
CLK4-211ENST00000522556 OTUD7AQ8TE49 926 aaPredicted RBP21.79■■□□□ 1.08
CLK4-211ENST00000522556 SH3RF3Q8TEJ3 882 aaPredicted RBP21.79■■□□□ 1.08
CLK4-211ENST00000522556 BOLA2Q9H3K6 86 aa21.79■■□□□ 1.08
CLK4-211ENST00000522556 DDTLA6NHG4 134 aaPredicted RBP21.78■■□□□ 1.08
CLK4-211ENST00000522556 GOLIM4O00461 696 aa21.78■■□□□ 1.08
CLK4-211ENST00000522556 CHGBP05060 677 aa21.78■■□□□ 1.08
CLK4-211ENST00000522556 HSPA8P11142 646 aaKnown RBP21.78■■□□□ 1.08
CLK4-211ENST00000522556 IREB2P48200 963 aaKnown RBP21.78■■□□□ 1.08
CLK4-211ENST00000522556 DYNLL1P63167 89 aaKnown RBP21.78■■□□□ 1.08
CLK4-211ENST00000522556 SLFNL1Q499Z3 407 aa21.78■■□□□ 1.08
CLK4-211ENST00000522556 MAGEB6Q8N7X4 407 aa21.78■■□□□ 1.08
CLK4-211ENST00000522556 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.78■■□□□ 1.08
CLK4-211ENST00000522556 CSRNP1Q96S65 589 aa21.78■■□□□ 1.08
CLK4-211ENST00000522556 ELP3Q9H9T3 547 aa21.78■■□□□ 1.08
CLK4-211ENST00000522556 MYH7P12883 1935 aa21.77■■□□□ 1.08
CLK4-211ENST00000522556 LDHCP07864 332 aa21.77■■□□□ 1.08
CLK4-211ENST00000522556 VGLL4Q14135 290 aa21.77■■□□□ 1.08
CLK4-211ENST00000522556 COL13A1Q5TAT6 717 aaPredicted RBP21.77■■□□□ 1.08
CLK4-211ENST00000522556 MIGA1Q8NAN2 632 aa21.77■■□□□ 1.08
CLK4-211ENST00000522556 AIDAQ96BJ3 306 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms