RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 ATG9AQ7Z3C6 839 aa19.16■□□□□ 0.66
TRAPPC9-213ENST00000522504 PTPRCP08575 1304 aa19.16■□□□□ 0.66
TRAPPC9-213ENST00000522504 CEP290O15078 2479 aa19.16■□□□□ 0.66
TRAPPC9-213ENST00000522504 EYA2O00167 538 aa19.15■□□□□ 0.66
TRAPPC9-213ENST00000522504 IFIT1P09914 478 aaKnown RBP19.15■□□□□ 0.66
TRAPPC9-213ENST00000522504 NFIAQ12857 509 aa19.15■□□□□ 0.66
TRAPPC9-213ENST00000522504 ARHGEF6Q15052 776 aa19.15■□□□□ 0.66
TRAPPC9-213ENST00000522504 CDC42EP5Q6NZY7 148 aa19.15■□□□□ 0.66
TRAPPC9-213ENST00000522504 NBPF11Q86T75 865 aa19.15■□□□□ 0.66
TRAPPC9-213ENST00000522504 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.15■□□□□ 0.66
TRAPPC9-213ENST00000522504 ZCCHC17Q9NP64 241 aaKnown RBP19.15■□□□□ 0.66
TRAPPC9-213ENST00000522504 DAGLAQ9Y4D2 1042 aa19.15■□□□□ 0.66
TRAPPC9-213ENST00000522504 RPAP1Q9BWH6 1393 aaPredicted RBP19.15■□□□□ 0.66
TRAPPC9-213ENST00000522504 TCP10Q12799 353 aa19.14■□□□□ 0.65
TRAPPC9-213ENST00000522504 MOGSQ13724 837 aa19.14■□□□□ 0.65
TRAPPC9-213ENST00000522504 SLC4A8Q2Y0W8 1093 aa19.14■□□□□ 0.65
TRAPPC9-213ENST00000522504 C17orf99Q6UX52 265 aa19.14■□□□□ 0.65
TRAPPC9-213ENST00000522504 ZNF341Q9BYN7 854 aa19.14■□□□□ 0.65
TRAPPC9-213ENST00000522504 MAST3O60307 1309 aa19.14■□□□□ 0.65
TRAPPC9-213ENST00000522504 ZNF316A6NFI3 1004 aaPredicted RBP19.13■□□□□ 0.65
TRAPPC9-213ENST00000522504 PRDX5P30044 214 aa19.13■□□□□ 0.65
TRAPPC9-213ENST00000522504 PPATQ06203 517 aa19.13■□□□□ 0.65
TRAPPC9-213ENST00000522504 DCAF15Q66K64 600 aa19.13■□□□□ 0.65
TRAPPC9-213ENST00000522504 ZFPM1Q8IX07 1006 aa19.13■□□□□ 0.65
TRAPPC9-213ENST00000522504 WDR66Q8TBY9 1149 aa19.13■□□□□ 0.65
TRAPPC9-213ENST00000522504 FAM151AQ8WW52 585 aa19.13■□□□□ 0.65
TRAPPC9-213ENST00000522504 LPIN2Q92539 896 aa19.13■□□□□ 0.65
TRAPPC9-213ENST00000522504 FAM198AQ9UFP1 575 aa19.13■□□□□ 0.65
TRAPPC9-213ENST00000522504 CPA4Q9UI42 421 aa19.13■□□□□ 0.65
TRAPPC9-213ENST00000522504 ZNF112Q9UJU3 913 aa19.13■□□□□ 0.65
TRAPPC9-213ENST00000522504 ADGRA2Q96PE1 1338 aa19.12■□□□□ 0.65
TRAPPC9-213ENST00000522504 SLC5A1P13866 664 aa19.12■□□□□ 0.65
TRAPPC9-213ENST00000522504 HOOK2Q96ED9 719 aa19.12■□□□□ 0.65
TRAPPC9-213ENST00000522504 TRIM47Q96LD4 638 aa19.12■□□□□ 0.65
TRAPPC9-213ENST00000522504 FXR1P51114 621 aaKnown RBP eCLIP19.11■□□□□ 0.65
TRAPPC9-213ENST00000522504 KIF22Q14807 665 aa19.11■□□□□ 0.65
TRAPPC9-213ENST00000522504 SIL1Q9H173 461 aa19.11■□□□□ 0.65
TRAPPC9-213ENST00000522504 KCNH4Q9UQ05 1017 aa19.11■□□□□ 0.65
TRAPPC9-213ENST00000522504 PDHXO00330 501 aa19.1■□□□□ 0.65
TRAPPC9-213ENST00000522504 WDHD1O75717 1129 aaPredicted RBP19.1■□□□□ 0.65
TRAPPC9-213ENST00000522504 MTFR1Q15390 333 aa19.1■□□□□ 0.65
TRAPPC9-213ENST00000522504 ANKRD23Q86SG2 305 aa19.1■□□□□ 0.65
TRAPPC9-213ENST00000522504 SHISA4Q96DD7 197 aa19.1■□□□□ 0.65
TRAPPC9-213ENST00000522504 COLQQ9Y215 455 aaPredicted RBP19.1■□□□□ 0.65
TRAPPC9-213ENST00000522504 E9PSI1 815 aa19.09■□□□□ 0.65
TRAPPC9-213ENST00000522504 PSMC4P43686 418 aa19.09■□□□□ 0.65
TRAPPC9-213ENST00000522504 SLFN5Q08AF3 891 aa19.09■□□□□ 0.65
TRAPPC9-213ENST00000522504 USP40Q9NVE5 1235 aa19.09■□□□□ 0.65
TRAPPC9-213ENST00000522504 ATRNL1Q5VV63 1379 aa19.08■□□□□ 0.65
TRAPPC9-213ENST00000522504 H0YGN5 161 aa19.08■□□□□ 0.64
TRAPPC9-213ENST00000522504 GNRH1P01148 92 aa19.08■□□□□ 0.64
TRAPPC9-213ENST00000522504 SLURP2P0DP57 97 aa19.08■□□□□ 0.64
TRAPPC9-213ENST00000522504 OSBPP22059 807 aa19.08■□□□□ 0.64
TRAPPC9-213ENST00000522504 PHKA1P46020 1223 aa19.08■□□□□ 0.64
TRAPPC9-213ENST00000522504 ATP2B3Q16720 1220 aa19.08■□□□□ 0.64
TRAPPC9-213ENST00000522504 NOL9Q5SY16 702 aaKnown RBP19.08■□□□□ 0.64
TRAPPC9-213ENST00000522504 GPAT2Q6NUI2 795 aa19.08■□□□□ 0.64
TRAPPC9-213ENST00000522504 CDCA7LQ96GN5 454 aa19.08■□□□□ 0.64
TRAPPC9-213ENST00000522504 SRRDQ9UH36 339 aa19.08■□□□□ 0.64
TRAPPC9-213ENST00000522504 TRIOBPQ9H2D6 2365 aa19.07■□□□□ 0.64
TRAPPC9-213ENST00000522504 PHF20L1A8MW92 1017 aa19.07■□□□□ 0.64
TRAPPC9-213ENST00000522504 LDHBP07195 334 aaKnown RBP19.07■□□□□ 0.64
TRAPPC9-213ENST00000522504 ADORA1P30542 326 aa19.07■□□□□ 0.64
TRAPPC9-213ENST00000522504 ZEB1P37275 1124 aaPredicted RBP19.07■□□□□ 0.64
TRAPPC9-213ENST00000522504 PA2G4Q9UQ80 394 aaKnown RBP19.07■□□□□ 0.64
TRAPPC9-213ENST00000522504 CIAO1O76071 339 aa19.06■□□□□ 0.64
TRAPPC9-213ENST00000522504 CYP2C8P10632 490 aa19.06■□□□□ 0.64
TRAPPC9-213ENST00000522504 PRMT2P55345 433 aa19.06■□□□□ 0.64
TRAPPC9-213ENST00000522504 SH3BP5LQ7L8J4 393 aa19.06■□□□□ 0.64
TRAPPC9-213ENST00000522504 SMC4Q9NTJ3 1288 aa19.06■□□□□ 0.64
TRAPPC9-213ENST00000522504 CEP126Q9P2H0 1117 aa19.06■□□□□ 0.64
TRAPPC9-213ENST00000522504 SALL1Q9NSC2 1324 aa19.05■□□□□ 0.64
TRAPPC9-213ENST00000522504 BCRP11274 1271 aa19.05■□□□□ 0.64
TRAPPC9-213ENST00000522504 ALDH1L2Q3SY69 923 aa19.05■□□□□ 0.64
TRAPPC9-213ENST00000522504 FMNL1O95466 1100 aaPredicted RBP19.04■□□□□ 0.64
TRAPPC9-213ENST00000522504 UBTFL1P0CB47 393 aaPredicted RBP19.04■□□□□ 0.64
TRAPPC9-213ENST00000522504 RGS3P49796 1198 aa19.04■□□□□ 0.64
TRAPPC9-213ENST00000522504 LRRFIP2Q9Y608 721 aaKnown RBP19.04■□□□□ 0.64
TRAPPC9-213ENST00000522504 LAMA3Q16787 3333 aa19.04■□□□□ 0.64
TRAPPC9-213ENST00000522504 RFX7Q2KHR2 1363 aa19.04■□□□□ 0.64
TRAPPC9-213ENST00000522504 CXCL11O14625 94 aa19.03■□□□□ 0.64
TRAPPC9-213ENST00000522504 GRK4P32298 578 aa19.03■□□□□ 0.64
TRAPPC9-213ENST00000522504 PRKCZQ05513 592 aa19.03■□□□□ 0.64
TRAPPC9-213ENST00000522504 RAET1EQ8TD07 263 aa19.03■□□□□ 0.64
TRAPPC9-213ENST00000522504 IDI2Q9BXS1 227 aa19.03■□□□□ 0.64
TRAPPC9-213ENST00000522504 DDX4Q9NQI0 724 aaKnown RBP19.03■□□□□ 0.64
TRAPPC9-213ENST00000522504 GNL3LQ9NVN8 582 aaKnown RBP19.03■□□□□ 0.64
TRAPPC9-213ENST00000522504 FBXO3Q9UK99 471 aa19.03■□□□□ 0.64
TRAPPC9-213ENST00000522504 DENND2AQ9ULE3 1009 aa19.03■□□□□ 0.64
TRAPPC9-213ENST00000522504 ZHX2Q9Y6X8 837 aa19.03■□□□□ 0.64
TRAPPC9-213ENST00000522504 MYH13Q9UKX3 1938 aa19.03■□□□□ 0.64
TRAPPC9-213ENST00000522504 GAKO14976 1311 aa19.02■□□□□ 0.64
TRAPPC9-213ENST00000522504 MYPNQ86TC9 1320 aa19.02■□□□□ 0.64
TRAPPC9-213ENST00000522504 RASGRF1Q13972 1273 aa19.02■□□□□ 0.64
TRAPPC9-213ENST00000522504 CCDC102BQ68D86 513 aa19.02■□□□□ 0.64
TRAPPC9-213ENST00000522504 UBE2Q1Q7Z7E8 422 aa19.02■□□□□ 0.64
TRAPPC9-213ENST00000522504 TRMT2AQ8IZ69 625 aaKnown RBP19.02■□□□□ 0.64
TRAPPC9-213ENST00000522504 PARK7Q99497 189 aaKnown RBP19.02■□□□□ 0.64
TRAPPC9-213ENST00000522504 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.02■□□□□ 0.64
TRAPPC9-213ENST00000522504 NOB1Q9ULX3 412 aaKnown RBP19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms