RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 ZKSCAN1P17029 563 aaPredicted RBP25.51■■□□□ 1.67
R3HCC1-208ENST00000522012 CRKP46108 304 aa25.51■■□□□ 1.67
R3HCC1-208ENST00000522012 ANAPC15P60006 121 aa25.51■■□□□ 1.67
R3HCC1-208ENST00000522012 HHIPL2Q6UWX4 724 aa25.51■■□□□ 1.67
R3HCC1-208ENST00000522012 KIF2CQ99661 725 aa25.51■■□□□ 1.67
R3HCC1-208ENST00000522012 NACAP1Q9BZK3 213 aa25.51■■□□□ 1.67
R3HCC1-208ENST00000522012 SNX14Q9Y5W7 946 aa25.51■■□□□ 1.67
R3HCC1-208ENST00000522012 ANP32AP39687 249 aaKnown RBP25.5■■□□□ 1.67
R3HCC1-208ENST00000522012 RASEFQ8IZ41 740 aa25.5■■□□□ 1.67
R3HCC1-208ENST00000522012 IFNL3Q8IZI9 196 aa25.5■■□□□ 1.67
R3HCC1-208ENST00000522012 SH3RF3Q8TEJ3 882 aaPredicted RBP25.5■■□□□ 1.67
R3HCC1-208ENST00000522012 SDR42E1Q8WUS8 393 aa25.5■■□□□ 1.67
R3HCC1-208ENST00000522012 SCN9AQ15858 1988 aa25.5■■□□□ 1.67
R3HCC1-208ENST00000522012 FZD9O00144 591 aa25.49■■□□□ 1.67
R3HCC1-208ENST00000522012 RBM5P52756 815 aaKnown RBP eCLIP25.49■■□□□ 1.67
R3HCC1-208ENST00000522012 HDLBPQ00341 1268 aaKnown RBP25.49■■□□□ 1.67
R3HCC1-208ENST00000522012 CERS3Q8IU89 383 aa25.49■■□□□ 1.67
R3HCC1-208ENST00000522012 MRIQ9BWK5 157 aa25.49■■□□□ 1.67
R3HCC1-208ENST00000522012 NAPBQ9H115 298 aa25.49■■□□□ 1.67
R3HCC1-208ENST00000522012 EPB41L4AQ9HCS5 686 aaPredicted RBP25.49■■□□□ 1.67
R3HCC1-208ENST00000522012 PLCG2P16885 1265 aa25.48■■□□□ 1.67
R3HCC1-208ENST00000522012 TDO2P48775 406 aa25.48■■□□□ 1.67
R3HCC1-208ENST00000522012 ALX1Q15699 326 aa25.48■■□□□ 1.67
R3HCC1-208ENST00000522012 AGBL3Q8NEM8 1001 aa25.48■■□□□ 1.67
R3HCC1-208ENST00000522012 KCNB2Q92953 911 aa25.48■■□□□ 1.67
R3HCC1-208ENST00000522012 GMLQ99445 158 aa25.48■■□□□ 1.67
R3HCC1-208ENST00000522012 RPAP1Q9BWH6 1393 aaPredicted RBP25.48■■□□□ 1.67
R3HCC1-208ENST00000522012 SERPINA10Q9UK55 444 aa25.47■■□□□ 1.67
R3HCC1-208ENST00000522012 HDAC9Q9UKV0 1011 aa25.47■■□□□ 1.67
R3HCC1-208ENST00000522012 CYP21A2P08686 494 aa25.47■■□□□ 1.67
R3HCC1-208ENST00000522012 IMMTQ16891 758 aaKnown RBP25.47■■□□□ 1.67
R3HCC1-208ENST00000522012 OGFOD1Q8N543 542 aa25.47■■□□□ 1.67
R3HCC1-208ENST00000522012 GJA3Q9Y6H8 435 aa25.47■■□□□ 1.67
R3HCC1-208ENST00000522012 USP5P45974 858 aa25.46■■□□□ 1.67
R3HCC1-208ENST00000522012 TEX11Q8IYF3 940 aa25.46■■□□□ 1.67
R3HCC1-208ENST00000522012 DDRGK1Q96HY6 314 aa25.46■■□□□ 1.67
R3HCC1-208ENST00000522012 ZDHHC15Q96MV8 337 aa25.46■■□□□ 1.67
R3HCC1-208ENST00000522012 RNF181Q9P0P0 153 aa25.46■■□□□ 1.67
R3HCC1-208ENST00000522012 CCDC88AQ3V6T2 1871 aa25.45■■□□□ 1.67
R3HCC1-208ENST00000522012 ZNF213O14771 459 aa25.45■■□□□ 1.66
R3HCC1-208ENST00000522012 USP17L8P0C7I0 530 aa25.45■■□□□ 1.66
R3HCC1-208ENST00000522012 RHBDL3P58872 404 aa25.45■■□□□ 1.66
R3HCC1-208ENST00000522012 HAND2P61296 217 aa25.45■■□□□ 1.66
R3HCC1-208ENST00000522012 APOBEC3HQ6NTF7 200 aaKnown RBP25.45■■□□□ 1.66
R3HCC1-208ENST00000522012 ATP8A2Q9NTI2 1148 aa25.45■■□□□ 1.66
R3HCC1-208ENST00000522012 USP40Q9NVE5 1235 aa25.45■■□□□ 1.66
R3HCC1-208ENST00000522012 TAF6LQ9Y6J9 622 aa25.45■■□□□ 1.66
R3HCC1-208ENST00000522012 GOLGB1Q14789 3259 aaKnown RBP25.44■■□□□ 1.66
R3HCC1-208ENST00000522012 RABEP1Q15276 862 aa25.44■■□□□ 1.66
R3HCC1-208ENST00000522012 CFAP100Q494V2 611 aa25.44■■□□□ 1.66
R3HCC1-208ENST00000522012 GIMAP6Q6P9H5 292 aa25.44■■□□□ 1.66
R3HCC1-208ENST00000522012 TGFBRAP1Q8WUH2 860 aa25.44■■□□□ 1.66
R3HCC1-208ENST00000522012 PCDHAC2Q9Y5I4 1007 aa25.44■■□□□ 1.66
R3HCC1-208ENST00000522012 ZMYM6O95789 1325 aa25.44■■□□□ 1.66
R3HCC1-208ENST00000522012 ZNF541Q9H0D2 1346 aa25.44■■□□□ 1.66
R3HCC1-208ENST00000522012 GRIN3BO60391 1043 aa25.43■■□□□ 1.66
R3HCC1-208ENST00000522012 TSGA10IPQ3SY00 556 aa25.43■■□□□ 1.66
R3HCC1-208ENST00000522012 IL17RAQ96F46 866 aa25.43■■□□□ 1.66
R3HCC1-208ENST00000522012 DCP1AQ9NPI6 582 aaPredicted RBP25.43■■□□□ 1.66
R3HCC1-208ENST00000522012 RPS12P25398 132 aaKnown RBP25.42■■□□□ 1.66
R3HCC1-208ENST00000522012 ADCK5Q3MIX3 580 aa25.42■■□□□ 1.66
R3HCC1-208ENST00000522012 C9orf131Q5VYM1 1079 aa25.42■■□□□ 1.66
R3HCC1-208ENST00000522012 CDC42EP5Q6NZY7 148 aa25.42■■□□□ 1.66
R3HCC1-208ENST00000522012 JAKMIP1Q96N16 626 aaKnown RBP25.42■■□□□ 1.66
R3HCC1-208ENST00000522012 KRT32Q14532 448 aa25.42■■□□□ 1.66
R3HCC1-208ENST00000522012 ZNF646O15015 1829 aaPredicted RBP25.41■■□□□ 1.66
R3HCC1-208ENST00000522012 MINDY4BA8MYZ0 360 aa25.41■■□□□ 1.66
R3HCC1-208ENST00000522012 GMPSP49915 693 aaPredicted RBP25.41■■□□□ 1.66
R3HCC1-208ENST00000522012 MAPKAPK5Q8IW41 473 aa25.41■■□□□ 1.66
R3HCC1-208ENST00000522012 PSMA5P28066 241 aa25.4■■□□□ 1.66
R3HCC1-208ENST00000522012 DLGAP5Q15398 846 aa25.4■■□□□ 1.66
R3HCC1-208ENST00000522012 UPF3BQ9BZI7 483 aaKnown RBP25.4■■□□□ 1.66
R3HCC1-208ENST00000522012 MCM9Q9NXL9 1143 aa25.4■■□□□ 1.66
R3HCC1-208ENST00000522012 USP17L12C9JPN9 530 aa25.39■■□□□ 1.66
R3HCC1-208ENST00000522012 USP17L21D6R901 530 aa25.39■■□□□ 1.66
R3HCC1-208ENST00000522012 CASTP20810 708 aaKnown RBP25.39■■□□□ 1.66
R3HCC1-208ENST00000522012 NEK4P51957 841 aa25.39■■□□□ 1.66
R3HCC1-208ENST00000522012 CTR9Q6PD62 1173 aa25.39■■□□□ 1.66
R3HCC1-208ENST00000522012 MYH2Q9UKX2 1941 aa25.38■■□□□ 1.65
R3HCC1-208ENST00000522012 E7EWF7 191 aa25.38■■□□□ 1.65
R3HCC1-208ENST00000522012 CTDSPL2Q05D32 466 aa25.38■■□□□ 1.65
R3HCC1-208ENST00000522012 PPARAQ07869 468 aa25.38■■□□□ 1.65
R3HCC1-208ENST00000522012 STOX1Q6ZVD7 989 aa25.38■■□□□ 1.65
R3HCC1-208ENST00000522012 DPF2Q92785 391 aa25.38■■□□□ 1.65
R3HCC1-208ENST00000522012 PRMT6Q96LA8 375 aaPredicted RBP25.38■■□□□ 1.65
R3HCC1-208ENST00000522012 TM6SF1Q9BZW5 370 aa25.38■■□□□ 1.65
R3HCC1-208ENST00000522012 MKRN1Q9UHC7 482 aaKnown RBP25.38■■□□□ 1.65
R3HCC1-208ENST00000522012 CYP2D7A0A087X1C5 515 aa25.37■■□□□ 1.65
R3HCC1-208ENST00000522012 PICALMQ13492 652 aa25.37■■□□□ 1.65
R3HCC1-208ENST00000522012 NEK1Q96PY6 1258 aa25.37■■□□□ 1.65
R3HCC1-208ENST00000522012 NBPF3Q9H094 633 aa25.37■■□□□ 1.65
R3HCC1-208ENST00000522012 TDRD3Q9H7E2 651 aaKnown RBP25.37■■□□□ 1.65
R3HCC1-208ENST00000522012 ARPP21Q9UBL0 812 aaPredicted RBP25.37■■□□□ 1.65
R3HCC1-208ENST00000522012 SAP30BPQ9UHR5 308 aaKnown RBP25.37■■□□□ 1.65
R3HCC1-208ENST00000522012 PSME4Q14997 1843 aa25.37■■□□□ 1.65
R3HCC1-208ENST00000522012 FLT1P17948 1338 aa25.37■■□□□ 1.65
R3HCC1-208ENST00000522012 SHTN1A0MZ66 631 aa25.37■■□□□ 1.65
R3HCC1-208ENST00000522012 SPDYE2BA6NHP3 402 aa25.37■■□□□ 1.65
R3HCC1-208ENST00000522012 WDHD1O75717 1129 aaPredicted RBP25.37■■□□□ 1.65
R3HCC1-208ENST00000522012 SPDYE6P0CI01 402 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms