RNA–Protein interactions for RNA: ENST00000521578.5

PTP4A3-204, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTP4A3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-204ENST00000521578 SCN4AP35499 1836 aa26.38■■□□□ 1.81
PTP4A3-204ENST00000521578 ZNF532Q9HCE3 1301 aa26.38■■□□□ 1.81
PTP4A3-204ENST00000521578 HSP90AA1P07900 732 aaKnown RBP26.38■■□□□ 1.81
PTP4A3-204ENST00000521578 MCM4P33991 863 aa26.38■■□□□ 1.81
PTP4A3-204ENST00000521578 EPHX2P34913 555 aa26.38■■□□□ 1.81
PTP4A3-204ENST00000521578 DLGAP5Q15398 846 aa26.38■■□□□ 1.81
PTP4A3-204ENST00000521578 HHIPL2Q6UWX4 724 aa26.38■■□□□ 1.81
PTP4A3-204ENST00000521578 ADGRA1Q86SQ6 560 aa26.38■■□□□ 1.81
PTP4A3-204ENST00000521578 SLF2Q8IX21 1173 aa26.38■■□□□ 1.81
PTP4A3-204ENST00000521578 MRIQ9BWK5 157 aa26.38■■□□□ 1.81
PTP4A3-204ENST00000521578 ANO2Q9NQ90 1003 aa26.38■■□□□ 1.81
PTP4A3-204ENST00000521578 DAGLAQ9Y4D2 1042 aa26.38■■□□□ 1.81
PTP4A3-204ENST00000521578 ADD2P35612 726 aa26.37■■□□□ 1.81
PTP4A3-204ENST00000521578 MMP14P50281 582 aa26.37■■□□□ 1.81
PTP4A3-204ENST00000521578 IL27Q8NEV9 243 aa26.37■■□□□ 1.81
PTP4A3-204ENST00000521578 ADARB2Q9NS39 739 aaKnown RBP26.37■■□□□ 1.81
PTP4A3-204ENST00000521578 MROH7-TTC4A0A0A0MT08 1334 aa26.37■■□□□ 1.81
PTP4A3-204ENST00000521578 SGSM2O43147 1006 aa26.36■■□□□ 1.81
PTP4A3-204ENST00000521578 VEGFAP15692 232 aaPredicted RBP26.36■■□□□ 1.81
PTP4A3-204ENST00000521578 KIF4BQ2VIQ3 1234 aa26.36■■□□□ 1.81
PTP4A3-204ENST00000521578 ZSCAN25Q6NSZ9 544 aa26.36■■□□□ 1.81
PTP4A3-204ENST00000521578 TAF1DQ9H5J8 278 aaPredicted RBP26.36■■□□□ 1.81
PTP4A3-204ENST00000521578 RNF113AO15541 343 aaKnown RBP26.36■■□□□ 1.81
PTP4A3-204ENST00000521578 LDHCP07864 332 aa26.36■■□□□ 1.81
PTP4A3-204ENST00000521578 RAB3GAP1Q15042 981 aa26.36■■□□□ 1.81
PTP4A3-204ENST00000521578 PRMT6Q96LA8 375 aaPredicted RBP26.36■■□□□ 1.81
PTP4A3-204ENST00000521578 GAKO14976 1311 aa26.35■■□□□ 1.81
PTP4A3-204ENST00000521578 TCRBV5S4A2TA0A5A2 114 aa26.35■■□□□ 1.81
PTP4A3-204ENST00000521578 IGSF3O75054 1194 aa26.35■■□□□ 1.81
PTP4A3-204ENST00000521578 LRRFIP1Q32MZ4 808 aaKnown RBP26.35■■□□□ 1.81
PTP4A3-204ENST00000521578 NBPF9Q3BBW0 867 aa26.35■■□□□ 1.81
PTP4A3-204ENST00000521578 ZDHHC15Q96MV8 337 aa26.35■■□□□ 1.81
PTP4A3-204ENST00000521578 GPBP1L1Q9HC44 474 aaPredicted RBP26.35■■□□□ 1.81
PTP4A3-204ENST00000521578 SPDYE2BA6NHP3 402 aa26.34■■□□□ 1.81
PTP4A3-204ENST00000521578 SPDYE6P0CI01 402 aa26.34■■□□□ 1.81
PTP4A3-204ENST00000521578 HIRAP54198 1017 aaPredicted RBP26.34■■□□□ 1.81
PTP4A3-204ENST00000521578 MIGA1Q8NAN2 632 aa26.34■■□□□ 1.81
PTP4A3-204ENST00000521578 MTMR14Q8NCE2 650 aa26.34■■□□□ 1.81
PTP4A3-204ENST00000521578 FAM163AQ96GL9 167 aaPredicted RBP26.34■■□□□ 1.81
PTP4A3-204ENST00000521578 WNT10BO00744 389 aa26.34■■□□□ 1.81
PTP4A3-204ENST00000521578 UBE3CQ15386 1083 aa26.34■■□□□ 1.81
PTP4A3-204ENST00000521578 EAPPQ56P03 285 aaPredicted RBP26.34■■□□□ 1.81
PTP4A3-204ENST00000521578 APOBEC3HQ6NTF7 200 aaKnown RBP26.34■■□□□ 1.81
PTP4A3-204ENST00000521578 IL25Q9H293 177 aa26.34■■□□□ 1.81
PTP4A3-204ENST00000521578 HIP1O00291 1037 aa26.33■■□□□ 1.81
PTP4A3-204ENST00000521578 ZFYP08048 801 aaPredicted RBP26.33■■□□□ 1.81
PTP4A3-204ENST00000521578 BTDP43251 543 aa26.33■■□□□ 1.81
PTP4A3-204ENST00000521578 TICAM2Q86XR7 235 aa26.33■■□□□ 1.81
PTP4A3-204ENST00000521578 ZBED3Q96IU2 234 aaPredicted RBP26.33■■□□□ 1.81
PTP4A3-204ENST00000521578 AATFQ9NY61 560 aaKnown RBP eCLIP26.33■■□□□ 1.812e-6■■■□□ 17.1
PTP4A3-204ENST00000521578 HSPA4P34932 840 aa26.32■■□□□ 1.8
PTP4A3-204ENST00000521578 MCM2P49736 904 aa26.32■■□□□ 1.8
PTP4A3-204ENST00000521578 ASTN2O75129 1339 aaPredicted RBP26.32■■□□□ 1.8
PTP4A3-204ENST00000521578 GPR75-ASB3A0A0A6YYF3 556 aa26.31■■□□□ 1.8
PTP4A3-204ENST00000521578 USP50Q70EL3 339 aaPredicted RBP26.31■■□□□ 1.8
PTP4A3-204ENST00000521578 TDRD3Q9H7E2 651 aaKnown RBP26.31■■□□□ 1.8
PTP4A3-204ENST00000521578 PALD1Q9ULE6 856 aa26.31■■□□□ 1.8
PTP4A3-204ENST00000521578 DYNLL1P63167 89 aaKnown RBP26.31■■□□□ 1.8
PTP4A3-204ENST00000521578 TMED8Q6PL24 325 aaPredicted RBP26.31■■□□□ 1.8
PTP4A3-204ENST00000521578 NOL10Q9BSC4 688 aaKnown RBP26.31■■□□□ 1.8
PTP4A3-204ENST00000521578 CLRN2A0PK11 232 aa26.3■■□□□ 1.8
PTP4A3-204ENST00000521578 RUFY2Q8WXA3 655 aa26.3■■□□□ 1.8
PTP4A3-204ENST00000521578 APPBP2Q92624 585 aa26.3■■□□□ 1.8
PTP4A3-204ENST00000521578 TNPO1Q92973 898 aaKnown RBP26.3■■□□□ 1.8
PTP4A3-204ENST00000521578 OSBP2Q969R2 916 aa26.3■■□□□ 1.8
PTP4A3-204ENST00000521578 SEC62Q99442 399 aaKnown RBP26.3■■□□□ 1.8
PTP4A3-204ENST00000521578 LSG1Q9H089 658 aaKnown RBP26.3■■□□□ 1.8
PTP4A3-204ENST00000521578 PUS7LQ9H0K6 701 aaKnown RBP26.3■■□□□ 1.8
PTP4A3-204ENST00000521578 RFX7Q2KHR2 1363 aa26.3■■□□□ 1.8
PTP4A3-204ENST00000521578 RAD50Q92878 1312 aa26.29■■□□□ 1.8
PTP4A3-204ENST00000521578 BAG3O95817 575 aa26.29■■□□□ 1.8
PTP4A3-204ENST00000521578 PNMA8AQ86V59 439 aaPredicted RBP26.29■■□□□ 1.8
PTP4A3-204ENST00000521578 FAM227BQ96M60 508 aa26.29■■□□□ 1.8
PTP4A3-204ENST00000521578 CWC22Q9HCG8 908 aaKnown RBP26.29■■□□□ 1.8
PTP4A3-204ENST00000521578 DIAPH3Q9NSV4 1193 aa26.29■■□□□ 1.8
PTP4A3-204ENST00000521578 FOXD4L1Q9NU39 408 aa26.29■■□□□ 1.8
PTP4A3-204ENST00000521578 USP40Q9NVE5 1235 aa26.29■■□□□ 1.8
PTP4A3-204ENST00000521578 POTEIP0CG38 1075 aa26.28■■□□□ 1.8
PTP4A3-204ENST00000521578 POTEJP0CG39 1038 aa26.28■■□□□ 1.8
PTP4A3-204ENST00000521578 NEK4P51957 841 aa26.28■■□□□ 1.8
PTP4A3-204ENST00000521578 NMIQ13287 307 aaPredicted RBP26.28■■□□□ 1.8
PTP4A3-204ENST00000521578 ZMYM1Q5SVZ6 1142 aa26.28■■□□□ 1.8
PTP4A3-204ENST00000521578 CDC42EP5Q6NZY7 148 aa26.28■■□□□ 1.8
PTP4A3-204ENST00000521578 MAGEB6P1A0A0J9YX57 407 aa26.28■■□□□ 1.8
PTP4A3-204ENST00000521578 MYO1BO43795 1136 aa26.28■■□□□ 1.8
PTP4A3-204ENST00000521578 ZNF784Q8NCA9 323 aaPredicted RBP26.28■■□□□ 1.8
PTP4A3-204ENST00000521578 A0A0D9SFI3 127 aa26.27■■□□□ 1.8
PTP4A3-204ENST00000521578 DDX11L8A8MPP1 907 aa26.27■■□□□ 1.8
PTP4A3-204ENST00000521578 CACNB3P54284 484 aa26.27■■□□□ 1.8
PTP4A3-204ENST00000521578 CWC27Q6UX04 472 aaKnown RBP26.27■■□□□ 1.8
PTP4A3-204ENST00000521578 SH3RF3Q8TEJ3 882 aaPredicted RBP26.27■■□□□ 1.8
PTP4A3-204ENST00000521578 RIOK1Q9BRS2 568 aaKnown RBP26.27■■□□□ 1.8
PTP4A3-204ENST00000521578 ZNF70Q9UC06 446 aaPredicted RBP26.27■■□□□ 1.8
PTP4A3-204ENST00000521578 CLEC11AQ9Y240 323 aa26.27■■□□□ 1.8
PTP4A3-204ENST00000521578 M0R2C6 588 aa26.26■■□□□ 1.79
PTP4A3-204ENST00000521578 MBD4O95243 580 aa26.26■■□□□ 1.79
PTP4A3-204ENST00000521578 RHBDL3P58872 404 aa26.26■■□□□ 1.79
PTP4A3-204ENST00000521578 PPP4CP60510 307 aa26.26■■□□□ 1.79
PTP4A3-204ENST00000521578 SPDYE2Q495Y8 402 aa26.26■■□□□ 1.79
PTP4A3-204ENST00000521578 CLEC17AQ6ZS10 378 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 631 ms