RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 EGFRP00533 1210 aa12.64□□□□□ -0.39
TRIM35-204ENST00000521283 PSEN2P49810 448 aa12.64□□□□□ -0.39
TRIM35-204ENST00000521283 PPP4R3BQ5MIZ7 849 aa12.64□□□□□ -0.39
TRIM35-204ENST00000521283 MFSD14BQ5SR56 506 aa12.64□□□□□ -0.39
TRIM35-204ENST00000521283 SERPINA10Q9UK55 444 aa12.64□□□□□ -0.39
TRIM35-204ENST00000521283 WDR33Q9C0J8 1336 aaKnown RBP12.63□□□□□ -0.39
TRIM35-204ENST00000521283 ARAP2Q8WZ64 1704 aa12.63□□□□□ -0.39
TRIM35-204ENST00000521283 MYH13Q9UKX3 1938 aa12.63□□□□□ -0.39
TRIM35-204ENST00000521283 GYG1P46976 350 aa12.63□□□□□ -0.39
TRIM35-204ENST00000521283 VEGFBP49765 207 aa12.63□□□□□ -0.39
TRIM35-204ENST00000521283 TNFAIP1Q13829 316 aa12.63□□□□□ -0.39
TRIM35-204ENST00000521283 DMRTA1Q5VZB9 504 aa12.63□□□□□ -0.39
TRIM35-204ENST00000521283 ATG9AQ7Z3C6 839 aa12.63□□□□□ -0.39
TRIM35-204ENST00000521283 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.63□□□□□ -0.39
TRIM35-204ENST00000521283 KLHDC4Q8TBB5 520 aa12.63□□□□□ -0.39
TRIM35-204ENST00000521283 WDR66Q8TBY9 1149 aa12.63□□□□□ -0.39
TRIM35-204ENST00000521283 CCDC102AQ96A19 550 aa12.63□□□□□ -0.39
TRIM35-204ENST00000521283 CLUAP1Q96AJ1 413 aa12.63□□□□□ -0.39
TRIM35-204ENST00000521283 AIDAQ96BJ3 306 aa12.63□□□□□ -0.39
TRIM35-204ENST00000521283 GBA2Q9HCG7 927 aaPredicted RBP12.63□□□□□ -0.39
TRIM35-204ENST00000521283 EMILIN3Q9NT22 766 aa12.63□□□□□ -0.39
TRIM35-204ENST00000521283 PCNTO95613 3336 aa12.62□□□□□ -0.39
TRIM35-204ENST00000521283 UNCXA6NJT0 531 aa12.62□□□□□ -0.39
TRIM35-204ENST00000521283 ATP2B3Q16720 1220 aa12.62□□□□□ -0.39
TRIM35-204ENST00000521283 NBPF9Q3BBW0 867 aa12.62□□□□□ -0.39
TRIM35-204ENST00000521283 ZGPATQ8N5A5 531 aaKnown RBP12.62□□□□□ -0.39
TRIM35-204ENST00000521283 TMEM57Q8N5G2 664 aa12.62□□□□□ -0.39
TRIM35-204ENST00000521283 ZBED3Q96IU2 234 aaPredicted RBP12.62□□□□□ -0.39
TRIM35-204ENST00000521283 CAPNS2Q96L46 248 aa12.62□□□□□ -0.39
TRIM35-204ENST00000521283 BEGAINQ9BUH8 593 aa12.62□□□□□ -0.39
TRIM35-204ENST00000521283 ZNF408Q9H9D4 720 aa12.62□□□□□ -0.39
TRIM35-204ENST00000521283 CA12O43570 354 aa12.61□□□□□ -0.39
TRIM35-204ENST00000521283 HUNKP57058 714 aa12.61□□□□□ -0.39
TRIM35-204ENST00000521283 NOGQ13253 232 aa12.61□□□□□ -0.39
TRIM35-204ENST00000521283 G3BP1Q13283 466 aaKnown RBP eCLIP12.61□□□□□ -0.39
TRIM35-204ENST00000521283 PAXIP1Q6ZW49 1069 aaPredicted RBP12.61□□□□□ -0.39
TRIM35-204ENST00000521283 ITPRIPQ8IWB1 547 aa12.61□□□□□ -0.39
TRIM35-204ENST00000521283 CERS5Q8N5B7 392 aa12.61□□□□□ -0.39
TRIM35-204ENST00000521283 CDCA5Q96FF9 252 aa12.61□□□□□ -0.39
TRIM35-204ENST00000521283 MXD3Q9BW11 206 aa12.61□□□□□ -0.39
TRIM35-204ENST00000521283 SIL1Q9H173 461 aa12.61□□□□□ -0.39
TRIM35-204ENST00000521283 DENND2AQ9ULE3 1009 aa12.61□□□□□ -0.39
TRIM35-204ENST00000521283 ADM5C9JUS6 153 aa12.6□□□□□ -0.39
TRIM35-204ENST00000521283 ZBTB7BO15156 539 aaPredicted RBP12.6□□□□□ -0.39
TRIM35-204ENST00000521283 IGSF3O75054 1194 aa12.6□□□□□ -0.39
TRIM35-204ENST00000521283 HSPA1AP0DMV8 641 aaKnown RBP12.6□□□□□ -0.39
TRIM35-204ENST00000521283 HSPA1BP0DMV9 641 aaKnown RBP12.6□□□□□ -0.39
TRIM35-204ENST00000521283 BCAMP50895 628 aa12.6□□□□□ -0.39
TRIM35-204ENST00000521283 RBM5P52756 815 aaKnown RBP eCLIP12.6□□□□□ -0.39
TRIM35-204ENST00000521283 ATP8B2P98198 1209 aa12.6□□□□□ -0.39
TRIM35-204ENST00000521283 SUPT20HL1Q3ZLR7 823 aa12.6□□□□□ -0.39
TRIM35-204ENST00000521283 CFAP100Q494V2 611 aa12.6□□□□□ -0.39
TRIM35-204ENST00000521283 RGMBQ6NW40 437 aa12.6□□□□□ -0.39
TRIM35-204ENST00000521283 ADGRD1Q6QNK2 874 aa12.6□□□□□ -0.39
TRIM35-204ENST00000521283 TTF2Q9UNY4 1162 aaKnown RBP12.6□□□□□ -0.39
TRIM35-204ENST00000521283 PAPPA2Q9BXP8 1791 aa12.6□□□□□ -0.39
TRIM35-204ENST00000521283 PDS5AQ29RF7 1337 aaKnown RBP12.6□□□□□ -0.39
TRIM35-204ENST00000521283 THSD7BQ9C0I4 1608 aa12.59□□□□□ -0.39
TRIM35-204ENST00000521283 EVI5O60447 810 aa12.59□□□□□ -0.39
TRIM35-204ENST00000521283 TNNI2P48788 182 aa12.59□□□□□ -0.39
TRIM35-204ENST00000521283 MVPQ14764 893 aaKnown RBP12.59□□□□□ -0.39
TRIM35-204ENST00000521283 ARMC9Q7Z3E5 817 aa12.59□□□□□ -0.39
TRIM35-204ENST00000521283 TEKT1Q969V4 418 aa12.59□□□□□ -0.39
TRIM35-204ENST00000521283 GPR108Q9NPR9 543 aa12.59□□□□□ -0.39
TRIM35-204ENST00000521283 WBP1LQ9NX94 342 aa12.59□□□□□ -0.39
TRIM35-204ENST00000521283 RCAN3Q9UKA8 241 aa12.59□□□□□ -0.39
TRIM35-204ENST00000521283 DDX19BQ9UMR2 479 aa12.59□□□□□ -0.39
TRIM35-204ENST00000521283 SALL1Q9NSC2 1324 aa12.59□□□□□ -0.39
TRIM35-204ENST00000521283 F8W031 263 aaPredicted RBP12.58□□□□□ -0.4
TRIM35-204ENST00000521283 PPP1R12BO60237 982 aaPredicted RBP12.58□□□□□ -0.4
TRIM35-204ENST00000521283 CTCFP49711 727 aaPredicted RBP12.58□□□□□ -0.4
TRIM35-204ENST00000521283 FMR1Q06787 632 aaKnown RBP eCLIP12.58□□□□□ -0.4
TRIM35-204ENST00000521283 CYP4F22Q6NT55 531 aa12.58□□□□□ -0.4
TRIM35-204ENST00000521283 HHIPL2Q6UWX4 724 aa12.58□□□□□ -0.4
TRIM35-204ENST00000521283 SLF2Q8IX21 1173 aa12.58□□□□□ -0.4
TRIM35-204ENST00000521283 ZNF454Q8N9F8 522 aa12.58□□□□□ -0.4
TRIM35-204ENST00000521283 SSH3Q8TE77 659 aa12.58□□□□□ -0.4
TRIM35-204ENST00000521283 HOOK2Q96ED9 719 aa12.58□□□□□ -0.4
TRIM35-204ENST00000521283 DEFB129Q9H1M3 183 aa12.58□□□□□ -0.4
TRIM35-204ENST00000521283 CRKP46108 304 aa12.57□□□□□ -0.4
TRIM35-204ENST00000521283 ZNF157P51786 506 aaPredicted RBP12.57□□□□□ -0.4
TRIM35-204ENST00000521283 FOSBP53539 338 aa12.57□□□□□ -0.4
TRIM35-204ENST00000521283 CHAF1AQ13111 956 aaPredicted RBP12.57□□□□□ -0.4
TRIM35-204ENST00000521283 HSP90AB4PQ58FF6 505 aa12.57□□□□□ -0.4
TRIM35-204ENST00000521283 FKBP1CQ5VVH2 108 aa12.57□□□□□ -0.4
TRIM35-204ENST00000521283 SPTY2D1Q68D10 685 aaPredicted RBP12.57□□□□□ -0.4
TRIM35-204ENST00000521283 PRMT6Q96LA8 375 aaPredicted RBP12.57□□□□□ -0.4
TRIM35-204ENST00000521283 ZDHHC15Q96MV8 337 aa12.57□□□□□ -0.4
TRIM35-204ENST00000521283 PRDM10Q9NQV6 1147 aa12.57□□□□□ -0.4
TRIM35-204ENST00000521283 TMOD2Q9NZR1 351 aa12.57□□□□□ -0.4
TRIM35-204ENST00000521283 PA2G4Q9UQ80 394 aaKnown RBP12.57□□□□□ -0.4
TRIM35-204ENST00000521283 NOP58Q9Y2X3 529 aaKnown RBP12.57□□□□□ -0.4
TRIM35-204ENST00000521283 ASTN2O75129 1339 aaPredicted RBP12.57□□□□□ -0.4
TRIM35-204ENST00000521283 PNMA6EA0A0J9YXQ4 647 aa12.56□□□□□ -0.4
TRIM35-204ENST00000521283 A0A1B0GUL7 405 aa12.56□□□□□ -0.4
TRIM35-204ENST00000521283 PDE3AQ14432 1141 aa12.56□□□□□ -0.4
TRIM35-204ENST00000521283 GORABQ5T7V8 394 aa12.56□□□□□ -0.4
TRIM35-204ENST00000521283 CCDC102BQ68D86 513 aa12.56□□□□□ -0.4
TRIM35-204ENST00000521283 ERC1Q8IUD2 1116 aa12.56□□□□□ -0.4
TRIM35-204ENST00000521283 RPAP2Q8IXW5 612 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms