RNA–Protein interactions for RNA: ENST00000519535.1

SCUBE2-205, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 3

Gene SCUBE2, Length 738 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-205ENST00000519535 ABCF2Q9UG63 623 aa16.73■□□□□ 0.27
SCUBE2-205ENST00000519535 NDUFB9Q9Y6M9 179 aa16.73■□□□□ 0.27
SCUBE2-205ENST00000519535 RFX7Q2KHR2 1363 aa16.73■□□□□ 0.27
SCUBE2-205ENST00000519535 PDS5AQ29RF7 1337 aaKnown RBP16.72■□□□□ 0.27
SCUBE2-205ENST00000519535 MECOMQ03112 1051 aa16.72■□□□□ 0.27
SCUBE2-205ENST00000519535 TCP10Q12799 353 aa16.72■□□□□ 0.27
SCUBE2-205ENST00000519535 ELP3Q9H9T3 547 aa16.72■□□□□ 0.27
SCUBE2-205ENST00000519535 GPR108Q9NPR9 543 aa16.72■□□□□ 0.27
SCUBE2-205ENST00000519535 DDX4Q9NQI0 724 aaKnown RBP16.72■□□□□ 0.27
SCUBE2-205ENST00000519535 USP40Q9NVE5 1235 aa16.72■□□□□ 0.27
SCUBE2-205ENST00000519535 HTTP42858 3142 aa16.71■□□□□ 0.27
SCUBE2-205ENST00000519535 TM4SF4P48230 202 aa16.71■□□□□ 0.27
SCUBE2-205ENST00000519535 RHBDL3P58872 404 aa16.71■□□□□ 0.27
SCUBE2-205ENST00000519535 OS9Q13438 667 aaPredicted RBP16.71■□□□□ 0.27
SCUBE2-205ENST00000519535 VGLL4Q14135 290 aa16.71■□□□□ 0.27
SCUBE2-205ENST00000519535 MIGA2Q7L4E1 593 aa16.71■□□□□ 0.27
SCUBE2-205ENST00000519535 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.71■□□□□ 0.27
SCUBE2-205ENST00000519535 BEGAINQ9BUH8 593 aa16.71■□□□□ 0.27
SCUBE2-205ENST00000519535 PIH1D3Q9NQM4 214 aaKnown RBP16.71■□□□□ 0.27
SCUBE2-205ENST00000519535 MAST3O60307 1309 aa16.7■□□□□ 0.26
SCUBE2-205ENST00000519535 ATRNL1Q5VV63 1379 aa16.7■□□□□ 0.26
SCUBE2-205ENST00000519535 IGF2BP3O00425 579 aaKnown RBP eCLIP16.7■□□□□ 0.26
SCUBE2-205ENST00000519535 PPP1R12BO60237 982 aaPredicted RBP16.7■□□□□ 0.26
SCUBE2-205ENST00000519535 WDHD1O75717 1129 aaPredicted RBP16.7■□□□□ 0.26
SCUBE2-205ENST00000519535 TBC1D8O95759 1140 aa16.7■□□□□ 0.26
SCUBE2-205ENST00000519535 TNFAIP1Q13829 316 aa16.7■□□□□ 0.26
SCUBE2-205ENST00000519535 FKBP1CQ5VVH2 108 aa16.7■□□□□ 0.26
SCUBE2-205ENST00000519535 ADGRA1Q86SQ6 560 aa16.7■□□□□ 0.26
SCUBE2-205ENST00000519535 FAM83AQ86UY5 434 aa16.7■□□□□ 0.26
SCUBE2-205ENST00000519535 NSUN4Q96CB9 384 aaKnown RBP16.7■□□□□ 0.26
SCUBE2-205ENST00000519535 SLC10A4Q96EP9 437 aa16.7■□□□□ 0.26
SCUBE2-205ENST00000519535 PTPN18Q99952 460 aa16.7■□□□□ 0.26
SCUBE2-205ENST00000519535 IL1RAPL2Q9NP60 686 aa16.7■□□□□ 0.26
SCUBE2-205ENST00000519535 CA12O43570 354 aa16.69■□□□□ 0.26
SCUBE2-205ENST00000519535 CYP2E1P05181 493 aaPredicted RBP16.69■□□□□ 0.26
SCUBE2-205ENST00000519535 ZKSCAN4Q969J2 545 aaPredicted RBP16.69■□□□□ 0.26
SCUBE2-205ENST00000519535 SAGE1Q9NXZ1 904 aa16.69■□□□□ 0.26
SCUBE2-205ENST00000519535 SNCAIPQ9Y6H5 919 aa16.69■□□□□ 0.26
SCUBE2-205ENST00000519535 OTOFQ9HC10 1997 aa16.68■□□□□ 0.26
SCUBE2-205ENST00000519535 INPP5BP32019 993 aa16.68■□□□□ 0.26
SCUBE2-205ENST00000519535 BTDP43251 543 aa16.68■□□□□ 0.26
SCUBE2-205ENST00000519535 ZAP70P43403 619 aa16.68■□□□□ 0.26
SCUBE2-205ENST00000519535 IREB2P48200 963 aaKnown RBP16.68■□□□□ 0.26
SCUBE2-205ENST00000519535 RGS3P49796 1198 aa16.68■□□□□ 0.26
SCUBE2-205ENST00000519535 MAP3K9P80192 1104 aa16.68■□□□□ 0.26
SCUBE2-205ENST00000519535 CAP1Q01518 475 aa16.68■□□□□ 0.26
SCUBE2-205ENST00000519535 GORABQ5T7V8 394 aa16.68■□□□□ 0.26
SCUBE2-205ENST00000519535 DZIP1Q86YF9 867 aaKnown RBP16.68■□□□□ 0.26
SCUBE2-205ENST00000519535 FAM151AQ8WW52 585 aa16.68■□□□□ 0.26
SCUBE2-205ENST00000519535 FAM163AQ96GL9 167 aaPredicted RBP16.68■□□□□ 0.26
SCUBE2-205ENST00000519535 MROH7-TTC4A0A0A0MT08 1334 aa16.68■□□□□ 0.26
SCUBE2-205ENST00000519535 GPR75-ASB3A0A0A6YYF3 556 aa16.67■□□□□ 0.26
SCUBE2-205ENST00000519535 DDTLA6NHG4 134 aaPredicted RBP16.67■□□□□ 0.26
SCUBE2-205ENST00000519535 APBB1O00213 710 aa16.67■□□□□ 0.26
SCUBE2-205ENST00000519535 TNNI2P48788 182 aa16.67■□□□□ 0.26
SCUBE2-205ENST00000519535 ERICH6Q7L0X2 663 aa16.67■□□□□ 0.26
SCUBE2-205ENST00000519535 ANKRD13AQ8IZ07 590 aa16.67■□□□□ 0.26
SCUBE2-205ENST00000519535 OPTNQ96CV9 577 aa16.67■□□□□ 0.26
SCUBE2-205ENST00000519535 MS4A4AQ96JQ5 239 aa16.67■□□□□ 0.26
SCUBE2-205ENST00000519535 YTHDC1Q96MU7 727 aaKnown RBP16.67■□□□□ 0.26
SCUBE2-205ENST00000519535 ANTXR1Q9H6X2 564 aa16.67■□□□□ 0.26
SCUBE2-205ENST00000519535 DDX19BQ9UMR2 479 aa16.67■□□□□ 0.26
SCUBE2-205ENST00000519535 RPAP1Q9BWH6 1393 aaPredicted RBP16.66■□□□□ 0.26
SCUBE2-205ENST00000519535 TTC39AQ5SRH9 613 aa16.66■□□□□ 0.26
SCUBE2-205ENST00000519535 RHPN1Q8TCX5 695 aa16.66■□□□□ 0.26
SCUBE2-205ENST00000519535 BRI3BPQ8WY22 251 aa16.66■□□□□ 0.26
SCUBE2-205ENST00000519535 IDI2Q9BXS1 227 aa16.66■□□□□ 0.26
SCUBE2-205ENST00000519535 TMOD2Q9NZR1 351 aa16.66■□□□□ 0.26
SCUBE2-205ENST00000519535 MYH13Q9UKX3 1938 aa16.66■□□□□ 0.26
SCUBE2-205ENST00000519535 CASP8AP2Q9UKL3 1982 aa16.66■□□□□ 0.26
SCUBE2-205ENST00000519535 UQCRFS1P1P0C7P4 283 aa16.65■□□□□ 0.26
SCUBE2-205ENST00000519535 PDE3AQ14432 1141 aa16.65■□□□□ 0.26
SCUBE2-205ENST00000519535 AACSQ86V21 672 aa16.65■□□□□ 0.26
SCUBE2-205ENST00000519535 IFNL1Q8IU54 200 aa16.65■□□□□ 0.26
SCUBE2-205ENST00000519535 ZGPATQ8N5A5 531 aaKnown RBP16.65■□□□□ 0.26
SCUBE2-205ENST00000519535 ABHD8Q96I13 439 aa16.65■□□□□ 0.26
SCUBE2-205ENST00000519535 ZNF512BQ96KM6 892 aaPredicted RBP16.65■□□□□ 0.26
SCUBE2-205ENST00000519535 WRNIP1Q96S55 665 aa16.65■□□□□ 0.26
SCUBE2-205ENST00000519535 MCOLN1Q9GZU1 580 aa16.65■□□□□ 0.26
SCUBE2-205ENST00000519535 RAI14Q9P0K7 980 aa16.65■□□□□ 0.26
SCUBE2-205ENST00000519535 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.65■□□□□ 0.26
SCUBE2-205ENST00000519535 ZNF112Q9UJU3 913 aa16.65■□□□□ 0.26
SCUBE2-205ENST00000519535 TESPA1A2RU30 521 aaPredicted RBP16.64■□□□□ 0.25
SCUBE2-205ENST00000519535 PHF20L1A8MW92 1017 aa16.64■□□□□ 0.25
SCUBE2-205ENST00000519535 ZBTB48P10074 688 aaPredicted RBP16.64■□□□□ 0.25
SCUBE2-205ENST00000519535 RRP1BQ14684 758 aaKnown RBP16.64■□□□□ 0.25
SCUBE2-205ENST00000519535 RPAP2Q8IXW5 612 aaPredicted RBP16.64■□□□□ 0.25
SCUBE2-205ENST00000519535 SH3RF3Q8TEJ3 882 aaPredicted RBP16.64■□□□□ 0.25
SCUBE2-205ENST00000519535 ZNF296Q8WUU4 475 aaPredicted RBP16.64■□□□□ 0.25
SCUBE2-205ENST00000519535 OTUD5Q96G74 571 aa16.64■□□□□ 0.25
SCUBE2-205ENST00000519535 AKAP11Q9UKA4 1901 aa16.63■□□□□ 0.25
SCUBE2-205ENST00000519535 SPDYE5A6NIY4 337 aa16.63■□□□□ 0.25
SCUBE2-205ENST00000519535 FAM196BA6NMK8 535 aa16.63■□□□□ 0.25
SCUBE2-205ENST00000519535 MS4A1P11836 297 aa16.63■□□□□ 0.25
SCUBE2-205ENST00000519535 PICALMQ13492 652 aa16.63■□□□□ 0.25
SCUBE2-205ENST00000519535 SPTY2D1Q68D10 685 aaPredicted RBP16.63■□□□□ 0.25
SCUBE2-205ENST00000519535 MANSC4A6NHS7 340 aaPredicted RBP16.62■□□□□ 0.25
SCUBE2-205ENST00000519535 UNCXA6NJT0 531 aa16.62■□□□□ 0.25
SCUBE2-205ENST00000519535 SMARCA5O60264 1052 aaPredicted RBP16.62■□□□□ 0.25
SCUBE2-205ENST00000519535 CHGBP05060 677 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms