RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 TFE3P19532 575 aaPredicted RBP9.29□□□□□ -0.92
CLK4-202ENST00000519132 CAMK2GQ13555 558 aaPredicted RBP9.29□□□□□ -0.92
CLK4-202ENST00000519132 PPP2R5EQ16537 467 aa9.29□□□□□ -0.92
CLK4-202ENST00000519132 NOC4LQ9BVI4 516 aaKnown RBP9.29□□□□□ -0.92
CLK4-202ENST00000519132 OXCT2Q9BYC2 517 aaPredicted RBP9.29□□□□□ -0.92
CLK4-202ENST00000519132 ZFAND3Q9H8U3 227 aa9.29□□□□□ -0.92
CLK4-202ENST00000519132 ABCB6Q9NP58 842 aa9.29□□□□□ -0.92
CLK4-202ENST00000519132 PCDHB5Q9Y5E4 795 aa9.29□□□□□ -0.92
CLK4-202ENST00000519132 PTPRTO14522 1441 aa9.29□□□□□ -0.92
CLK4-202ENST00000519132 ARHGAP31Q2M1Z3 1444 aa9.29□□□□□ -0.92
CLK4-202ENST00000519132 PDPK1O15530 556 aa9.29□□□□□ -0.92
CLK4-202ENST00000519132 MCM4P33991 863 aa9.29□□□□□ -0.92
CLK4-202ENST00000519132 C4orf17Q53FE4 359 aa9.29□□□□□ -0.92
CLK4-202ENST00000519132 MRM1Q6IN84 353 aaKnown RBP9.29□□□□□ -0.92
CLK4-202ENST00000519132 KRT25Q7Z3Z0 450 aa9.29□□□□□ -0.92
CLK4-202ENST00000519132 RELL1Q8IUW5 271 aa9.29□□□□□ -0.92
CLK4-202ENST00000519132 ZSCAN10Q96SZ4 725 aaPredicted RBP9.29□□□□□ -0.92
CLK4-202ENST00000519132 RSRP1Q9BUV0 290 aa9.29□□□□□ -0.92
CLK4-202ENST00000519132 ANTXR1Q9H6X2 564 aa9.29□□□□□ -0.92
CLK4-202ENST00000519132 NEURL4Q96JN8 1562 aa9.29□□□□□ -0.92
CLK4-202ENST00000519132 GREM1O60565 184 aa9.29□□□□□ -0.92
CLK4-202ENST00000519132 PAX3P23760 479 aa9.29□□□□□ -0.92
CLK4-202ENST00000519132 CNGA1P29973 690 aa9.29□□□□□ -0.92
CLK4-202ENST00000519132 MTERF2Q49AM1 385 aa9.29□□□□□ -0.92
CLK4-202ENST00000519132 MORC4Q8TE76 937 aa9.29□□□□□ -0.92
CLK4-202ENST00000519132 EHD4Q9H223 541 aa9.29□□□□□ -0.92
CLK4-202ENST00000519132 SLKQ9H2G2 1235 aaPredicted RBP9.29□□□□□ -0.92
CLK4-202ENST00000519132 SALL4Q9UJQ4 1053 aa9.29□□□□□ -0.92
CLK4-202ENST00000519132 GJB6O95452 261 aa9.28□□□□□ -0.92
CLK4-202ENST00000519132 F13A1P00488 732 aa9.28□□□□□ -0.92
CLK4-202ENST00000519132 TMEM214Q6NUQ4 689 aaKnown RBP9.28□□□□□ -0.92
CLK4-202ENST00000519132 KCNG1Q9UIX4 513 aa9.28□□□□□ -0.92
CLK4-202ENST00000519132 PLA2R1Q13018 1463 aa9.28□□□□□ -0.92
CLK4-202ENST00000519132 LRRC69Q6ZNQ3 347 aa9.28□□□□□ -0.92
CLK4-202ENST00000519132 GK5Q6ZS86 529 aa9.28□□□□□ -0.92
CLK4-202ENST00000519132 NIFKQ9BYG3 293 aaKnown RBP9.28□□□□□ -0.92
CLK4-202ENST00000519132 GSTT1P30711 240 aa9.27□□□□□ -0.92
CLK4-202ENST00000519132 GRIN2CQ14957 1233 aa9.27□□□□□ -0.92
CLK4-202ENST00000519132 SNAP47Q5SQN1 464 aa9.27□□□□□ -0.92
CLK4-202ENST00000519132 ATP8A1Q9Y2Q0 1164 aa9.27□□□□□ -0.92
CLK4-202ENST00000519132 MROH2AA6NES4 1674 aa9.27□□□□□ -0.92
CLK4-202ENST00000519132 A0A1W2PP55 124 aa9.27□□□□□ -0.93
CLK4-202ENST00000519132 SIAH2O43255 324 aa9.27□□□□□ -0.93
CLK4-202ENST00000519132 C6orf15Q6UXA7 325 aaPredicted RBP9.27□□□□□ -0.93
CLK4-202ENST00000519132 SIN3AQ96ST3 1273 aa9.27□□□□□ -0.93
CLK4-202ENST00000519132 FEZ1Q99689 392 aa9.27□□□□□ -0.93
CLK4-202ENST00000519132 HOMER2Q9NSB8 354 aa9.27□□□□□ -0.93
CLK4-202ENST00000519132 KDM2BQ8NHM5 1336 aa9.27□□□□□ -0.93
CLK4-202ENST00000519132 FAM86C2PA6NEL3 165 aa9.27□□□□□ -0.93
CLK4-202ENST00000519132 ENC1O14682 589 aa9.27□□□□□ -0.93
CLK4-202ENST00000519132 ADH1AP07327 375 aa9.27□□□□□ -0.93
CLK4-202ENST00000519132 HOMER1Q86YM7 354 aa9.27□□□□□ -0.93
CLK4-202ENST00000519132 JARID2Q92833 1246 aaPredicted RBP9.27□□□□□ -0.93
CLK4-202ENST00000519132 RPS6KC1Q96S38 1066 aa9.27□□□□□ -0.93
CLK4-202ENST00000519132 SUV39H2Q9H5I1 410 aa9.27□□□□□ -0.93
CLK4-202ENST00000519132 CLTCQ00610 1675 aaKnown RBP9.26□□□□□ -0.93
CLK4-202ENST00000519132 LIG3P49916 1009 aa9.26□□□□□ -0.93
CLK4-202ENST00000519132 C16orf86Q6ZW13 317 aa9.26□□□□□ -0.93
CLK4-202ENST00000519132 TRPM4Q8TD43 1214 aa9.26□□□□□ -0.93
CLK4-202ENST00000519132 NT5C1AQ9BXI3 368 aa9.26□□□□□ -0.93
CLK4-202ENST00000519132 SUPT16HQ9Y5B9 1047 aaKnown RBP9.26□□□□□ -0.93
CLK4-202ENST00000519132 XYLBO75191 536 aa9.26□□□□□ -0.93
CLK4-202ENST00000519132 DHX9Q08211 1270 aaKnown RBP9.26□□□□□ -0.93
CLK4-202ENST00000519132 BTLAQ7Z6A9 289 aa9.26□□□□□ -0.93
CLK4-202ENST00000519132 GALNT12Q8IXK2 581 aa9.26□□□□□ -0.93
CLK4-202ENST00000519132 NPATQ14207 1427 aa9.25□□□□□ -0.93
CLK4-202ENST00000519132 CES1P23141 567 aa9.25□□□□□ -0.93
CLK4-202ENST00000519132 GRIA4P48058 902 aa9.25□□□□□ -0.93
CLK4-202ENST00000519132 MPHOSPH6Q99547 160 aaKnown RBP9.25□□□□□ -0.93
CLK4-202ENST00000519132 PRKAB1Q9Y478 270 aa9.25□□□□□ -0.93
CLK4-202ENST00000519132 PREX1Q8TCU6 1659 aa9.25□□□□□ -0.93
CLK4-202ENST00000519132 KIF1BO60333 1816 aa9.25□□□□□ -0.93
CLK4-202ENST00000519132 KATNA1O75449 491 aa9.25□□□□□ -0.93
CLK4-202ENST00000519132 GGT6Q6P531 493 aa9.25□□□□□ -0.93
CLK4-202ENST00000519132 DDX42Q86XP3 938 aaKnown RBP eCLIP9.25□□□□□ -0.93
CLK4-202ENST00000519132 PIK3C2BO00750 1634 aa9.25□□□□□ -0.93
CLK4-202ENST00000519132 CCDC144AA2RUR9 1427 aa9.25□□□□□ -0.93
CLK4-202ENST00000519132 TONSLQ96HA7 1378 aa9.25□□□□□ -0.93
CLK4-202ENST00000519132 WASHC2CQ9Y4E1 1318 aa9.25□□□□□ -0.93
CLK4-202ENST00000519132 ATP4AP20648 1035 aa9.25□□□□□ -0.93
CLK4-202ENST00000519132 GTF2E1P29083 439 aaPredicted RBP9.25□□□□□ -0.93
CLK4-202ENST00000519132 MPRIPQ6WCQ1 1025 aa9.25□□□□□ -0.93
CLK4-202ENST00000519132 SMAD5Q99717 465 aaKnown RBP9.25□□□□□ -0.93
CLK4-202ENST00000519132 CLTCL1P53675 1640 aa9.25□□□□□ -0.93
CLK4-202ENST00000519132 CNTLNQ9NXG0 1405 aa9.24□□□□□ -0.93
CLK4-202ENST00000519132 FOXD4L6Q3SYB3 417 aaPredicted RBP9.24□□□□□ -0.93
CLK4-202ENST00000519132 FOXD4L3Q6VB84 417 aaPredicted RBP9.24□□□□□ -0.93
CLK4-202ENST00000519132 MRGPRX2Q96LB1 330 aa9.24□□□□□ -0.93
CLK4-202ENST00000519132 IL21Q9HBE4 155 aa9.24□□□□□ -0.93
CLK4-202ENST00000519132 GRIN3BO60391 1043 aa9.24□□□□□ -0.93
CLK4-202ENST00000519132 MYCLP1P12525 358 aaPredicted RBP9.24□□□□□ -0.93
CLK4-202ENST00000519132 SPRED3Q2MJR0 410 aa9.24□□□□□ -0.93
CLK4-202ENST00000519132 PDE12Q6L8Q7 609 aaKnown RBP9.24□□□□□ -0.93
CLK4-202ENST00000519132 CNTNAP3BQ96NU0 1288 aa9.24□□□□□ -0.93
CLK4-202ENST00000519132 CNTNAP3Q9BZ76 1288 aa9.24□□□□□ -0.93
CLK4-202ENST00000519132 ABI2Q9NYB9 513 aaPredicted RBP9.24□□□□□ -0.93
CLK4-202ENST00000519132 NOS1P29475 1434 aa9.24□□□□□ -0.93
CLK4-202ENST00000519132 CREB3O43889 395 aa9.23□□□□□ -0.93
CLK4-202ENST00000519132 DDAH1O94760 285 aa9.23□□□□□ -0.93
CLK4-202ENST00000519132 TARSP26639 723 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms