RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 KLC4Q9NSK0 619 aa15.44■□□□□ 0.06
PABPC1-208ENST00000519004 GOLGA6AQ9NYA3 693 aa15.44■□□□□ 0.06
PABPC1-208ENST00000519004 NUTM2FA1L443 756 aa15.44■□□□□ 0.06
PABPC1-208ENST00000519004 MEFVO15553 781 aaPredicted RBP15.44■□□□□ 0.06
PABPC1-208ENST00000519004 MYO1BO43795 1136 aa15.44■□□□□ 0.06
PABPC1-208ENST00000519004 PIP4K2BP78356 416 aa15.44■□□□□ 0.06
PABPC1-208ENST00000519004 NUTM2GQ5VZR2 741 aa15.44■□□□□ 0.06
PABPC1-208ENST00000519004 OTUD6BQ8N6M0 293 aa15.44■□□□□ 0.06
PABPC1-208ENST00000519004 BSDC1Q9NW68 430 aaPredicted RBP15.44■□□□□ 0.06
PABPC1-208ENST00000519004 RASSF9O75901 435 aa15.43■□□□□ 0.06
PABPC1-208ENST00000519004 CTDNEP1O95476 244 aa15.43■□□□□ 0.06
PABPC1-208ENST00000519004 SPECC1LQ69YQ0 1117 aa15.43■□□□□ 0.06
PABPC1-208ENST00000519004 RAD9BQ6WBX8 426 aa15.43■□□□□ 0.06
PABPC1-208ENST00000519004 SLC35F6Q8N357 371 aa15.43■□□□□ 0.06
PABPC1-208ENST00000519004 LINC00301Q8NCQ3 95 aa15.43■□□□□ 0.06
PABPC1-208ENST00000519004 ZNF483Q8TF39 744 aaPredicted RBP15.43■□□□□ 0.06
PABPC1-208ENST00000519004 LLPHQ9BRT6 129 aaKnown RBP15.43■□□□□ 0.06
PABPC1-208ENST00000519004 TUBE1Q9UJT0 475 aa15.43■□□□□ 0.06
PABPC1-208ENST00000519004 AMPHP49418 695 aa15.43■□□□□ 0.06
PABPC1-208ENST00000519004 ACTN3Q08043 901 aaPredicted RBP15.43■□□□□ 0.06
PABPC1-208ENST00000519004 Q6ZUG5 572 aa15.43■□□□□ 0.06
PABPC1-208ENST00000519004 SH3GL2Q99962 352 aa15.43■□□□□ 0.06
PABPC1-208ENST00000519004 STK31Q9BXU1 1019 aa15.43■□□□□ 0.06
PABPC1-208ENST00000519004 ECHDC1Q9NTX5 307 aa15.43■□□□□ 0.06
PABPC1-208ENST00000519004 JCADQ9P266 1359 aa15.43■□□□□ 0.06
PABPC1-208ENST00000519004 FAM208AQ9UK61 1670 aaKnown RBP15.42■□□□□ 0.06
PABPC1-208ENST00000519004 A0A0D9SFI3 127 aa15.42■□□□□ 0.06
PABPC1-208ENST00000519004 KIAA0754O94854 1291 aa15.42■□□□□ 0.06
PABPC1-208ENST00000519004 SMTNP53814 917 aa15.42■□□□□ 0.06
PABPC1-208ENST00000519004 B4GALNT4Q76KP1 1039 aa15.42■□□□□ 0.06
PABPC1-208ENST00000519004 HMG20BQ9P0W2 317 aa15.42■□□□□ 0.06
PABPC1-208ENST00000519004 DDX20Q9UHI6 824 aaKnown RBP15.42■□□□□ 0.06
PABPC1-208ENST00000519004 PXDNLA1KZ92 1463 aa15.42■□□□□ 0.06
PABPC1-208ENST00000519004 MED23Q9ULK4 1368 aa15.42■□□□□ 0.06
PABPC1-208ENST00000519004 PTPDC1A2A3K4 754 aa15.42■□□□□ 0.06
PABPC1-208ENST00000519004 USP14P54578 494 aa15.42■□□□□ 0.06
PABPC1-208ENST00000519004 ZKSCAN8Q15776 578 aaPredicted RBP15.42■□□□□ 0.06
PABPC1-208ENST00000519004 TLDC1Q6P9B6 456 aa15.42■□□□□ 0.06
PABPC1-208ENST00000519004 BORCS6Q96GS4 357 aa15.42■□□□□ 0.06
PABPC1-208ENST00000519004 SEC62Q99442 399 aaKnown RBP15.42■□□□□ 0.06
PABPC1-208ENST00000519004 CLNS1AP54105 237 aaKnown RBP15.41■□□□□ 0.06
PABPC1-208ENST00000519004 GUCY1B3Q02153 619 aa15.41■□□□□ 0.06
PABPC1-208ENST00000519004 ADCY2Q08462 1091 aa15.41■□□□□ 0.06
PABPC1-208ENST00000519004 NBPF9Q3BBW0 867 aa15.41■□□□□ 0.06
PABPC1-208ENST00000519004 CEP85LQ5SZL2 805 aa15.41■□□□□ 0.06
PABPC1-208ENST00000519004 NAPGQ99747 312 aaPredicted RBP15.41■□□□□ 0.06
PABPC1-208ENST00000519004 VCPKMTQ9H867 229 aa15.41■□□□□ 0.06
PABPC1-208ENST00000519004 CLIC4Q9Y696 253 aa15.41■□□□□ 0.06
PABPC1-208ENST00000519004 EME2A4GXA9 379 aaPredicted RBP15.41■□□□□ 0.06
PABPC1-208ENST00000519004 IBSPP21815 317 aaPredicted RBP15.41■□□□□ 0.06
PABPC1-208ENST00000519004 ARHGAP25P42331 645 aa15.41■□□□□ 0.06
PABPC1-208ENST00000519004 AMPD2Q01433 879 aa15.41■□□□□ 0.06
PABPC1-208ENST00000519004 AKAP17AQ02040 695 aaKnown RBP15.41■□□□□ 0.06
PABPC1-208ENST00000519004 NCAPH2Q6IBW4 605 aa15.41■□□□□ 0.06
PABPC1-208ENST00000519004 CCDC148Q8NFR7 591 aa15.41■□□□□ 0.06
PABPC1-208ENST00000519004 TSPYL4Q9UJ04 414 aa15.41■□□□□ 0.06
PABPC1-208ENST00000519004 PFKFB1P16118 471 aa15.4■□□□□ 0.06
PABPC1-208ENST00000519004 SPATS2Q86XZ4 545 aaKnown RBP15.4■□□□□ 0.06
PABPC1-208ENST00000519004 GDAP1L1Q96MZ0 367 aa15.4■□□□□ 0.06
PABPC1-208ENST00000519004 CDC5LQ99459 802 aaKnown RBP15.4■□□□□ 0.06
PABPC1-208ENST00000519004 CRACR2AQ9BSW2 395 aa15.4■□□□□ 0.06
PABPC1-208ENST00000519004 C19orf44Q9H6X5 657 aa15.4■□□□□ 0.06
PABPC1-208ENST00000519004 ETAA1Q9NY74 926 aa15.4■□□□□ 0.06
PABPC1-208ENST00000519004 A0A1B0GUA9 196 aa15.39■□□□□ 0.05
PABPC1-208ENST00000519004 FRMD3A2A2Y4 597 aa15.39■□□□□ 0.05
PABPC1-208ENST00000519004 HIP1O00291 1037 aa15.39■□□□□ 0.05
PABPC1-208ENST00000519004 SSR1P43307 286 aaKnown RBP15.39■□□□□ 0.05
PABPC1-208ENST00000519004 RRS1Q15050 365 aaKnown RBP15.39■□□□□ 0.05
PABPC1-208ENST00000519004 STK38Q15208 465 aa15.39■□□□□ 0.05
PABPC1-208ENST00000519004 YTHDF3Q7Z739 585 aaKnown RBP15.39■□□□□ 0.05
PABPC1-208ENST00000519004 KCNG4Q8TDN1 519 aa15.39■□□□□ 0.05
PABPC1-208ENST00000519004 CDK19Q9BWU1 502 aa15.39■□□□□ 0.05
PABPC1-208ENST00000519004 SALL1Q9NSC2 1324 aa15.39■□□□□ 0.05
PABPC1-208ENST00000519004 NDUFAB1O14561 156 aa15.39■□□□□ 0.05
PABPC1-208ENST00000519004 SF3A1Q15459 793 aaKnown RBP15.39■□□□□ 0.05
PABPC1-208ENST00000519004 CCDC40Q4G0X9 1142 aa15.39■□□□□ 0.05
PABPC1-208ENST00000519004 HSP90AA4PQ58FG1 418 aa15.39■□□□□ 0.05
PABPC1-208ENST00000519004 SULT6B1Q6IMI4 303 aa15.39■□□□□ 0.05
PABPC1-208ENST00000519004 NEK1Q96PY6 1258 aa15.39■□□□□ 0.05
PABPC1-208ENST00000519004 PANX2Q96RD6 677 aa15.39■□□□□ 0.05
PABPC1-208ENST00000519004 PAGR1Q9BTK6 254 aa15.39■□□□□ 0.05
PABPC1-208ENST00000519004 ZRANB1Q9UGI0 708 aa15.39■□□□□ 0.05
PABPC1-208ENST00000519004 MROH7-TTC4A0A0A0MT08 1334 aa15.39■□□□□ 0.05
PABPC1-208ENST00000519004 PLCB4Q15147 1175 aa15.38■□□□□ 0.05
PABPC1-208ENST00000519004 RASGRP2Q7LDG7 609 aa15.38■□□□□ 0.05
PABPC1-208ENST00000519004 ZNF589Q86UQ0 364 aaPredicted RBP15.38■□□□□ 0.05
PABPC1-208ENST00000519004 FAM228AQ86W67 206 aa15.38■□□□□ 0.05
PABPC1-208ENST00000519004 ITFG2Q969R8 447 aa15.38■□□□□ 0.05
PABPC1-208ENST00000519004 SLC40A1Q9NP59 571 aa15.38■□□□□ 0.05
PABPC1-208ENST00000519004 NPATQ14207 1427 aa15.38■□□□□ 0.05
PABPC1-208ENST00000519004 SPTLC2O15270 562 aa15.38■□□□□ 0.05
PABPC1-208ENST00000519004 ALDH1L1O75891 902 aa15.38■□□□□ 0.05
PABPC1-208ENST00000519004 YEATS4O95619 227 aa15.38■□□□□ 0.05
PABPC1-208ENST00000519004 ABL1P00519 1130 aa15.38■□□□□ 0.05
PABPC1-208ENST00000519004 MCM3P25205 808 aa15.38■□□□□ 0.05
PABPC1-208ENST00000519004 KRT32Q14532 448 aa15.38■□□□□ 0.05
PABPC1-208ENST00000519004 HSP90AB4PQ58FF6 505 aa15.38■□□□□ 0.05
PABPC1-208ENST00000519004 AP1ARQ63HQ0 302 aa15.38■□□□□ 0.05
PABPC1-208ENST00000519004 ANKRD18AQ8IVF6 992 aa15.38■□□□□ 0.05
PABPC1-208ENST00000519004 KIRREL3Q8IZU9 778 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms