RNA–Protein interactions for RNA: ENST00000518928.1

TSNARE1-203, Transcript of t-SNARE domain containing 1, humanhuman

TSL 3

Gene TSNARE1, Length 940 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-203ENST00000518928 FAM198AQ9UFP1 575 aa17.52■□□□□ 0.4
TSNARE1-203ENST00000518928 COG6Q9Y2V7 657 aa17.52■□□□□ 0.4
TSNARE1-203ENST00000518928 SUGT1Q9Y2Z0 365 aa17.52■□□□□ 0.4
TSNARE1-203ENST00000518928 SNCAIPQ9Y6H5 919 aa17.52■□□□□ 0.4
TSNARE1-203ENST00000518928 ZBTB48P10074 688 aaPredicted RBP17.51■□□□□ 0.39
TSNARE1-203ENST00000518928 MS4A1P11836 297 aa17.51■□□□□ 0.39
TSNARE1-203ENST00000518928 CTU1Q7Z7A3 348 aaKnown RBP17.51■□□□□ 0.39
TSNARE1-203ENST00000518928 SALL1Q9NSC2 1324 aa17.5■□□□□ 0.39
TSNARE1-203ENST00000518928 MANSC4A6NHS7 340 aaPredicted RBP17.5■□□□□ 0.39
TSNARE1-203ENST00000518928 LDHBP07195 334 aaKnown RBP17.5■□□□□ 0.39
TSNARE1-203ENST00000518928 INPP5BP32019 993 aa17.5■□□□□ 0.39
TSNARE1-203ENST00000518928 POLA2Q14181 598 aa17.5■□□□□ 0.39
TSNARE1-203ENST00000518928 MVPQ14764 893 aaKnown RBP17.5■□□□□ 0.39
TSNARE1-203ENST00000518928 TBC1D9Q6ZT07 1266 aa17.5■□□□□ 0.39
TSNARE1-203ENST00000518928 BRI3BPQ8WY22 251 aa17.5■□□□□ 0.39
TSNARE1-203ENST00000518928 DENND2AQ9ULE3 1009 aa17.5■□□□□ 0.39
TSNARE1-203ENST00000518928 MAST3O60307 1309 aa17.49■□□□□ 0.39
TSNARE1-203ENST00000518928 TNNI2P48788 182 aa17.49■□□□□ 0.39
TSNARE1-203ENST00000518928 SOX10P56693 466 aa17.49■□□□□ 0.39
TSNARE1-203ENST00000518928 MAP3K9P80192 1104 aa17.49■□□□□ 0.39
TSNARE1-203ENST00000518928 CRHR2Q13324 411 aa17.49■□□□□ 0.39
TSNARE1-203ENST00000518928 FAM83AQ86UY5 434 aa17.49■□□□□ 0.39
TSNARE1-203ENST00000518928 OTUD5Q96G74 571 aa17.49■□□□□ 0.39
TSNARE1-203ENST00000518928 NEUROD6Q96NK8 337 aa17.49■□□□□ 0.39
TSNARE1-203ENST00000518928 WRNIP1Q96S55 665 aa17.49■□□□□ 0.39
TSNARE1-203ENST00000518928 CFHR5Q9BXR6 569 aa17.49■□□□□ 0.39
TSNARE1-203ENST00000518928 HMG20BQ9P0W2 317 aa17.49■□□□□ 0.39
TSNARE1-203ENST00000518928 RFX7Q2KHR2 1363 aa17.49■□□□□ 0.39
TSNARE1-203ENST00000518928 MYH2Q9UKX2 1941 aa17.49■□□□□ 0.39
TSNARE1-203ENST00000518928 PDE3AQ14432 1141 aa17.48■□□□□ 0.39
TSNARE1-203ENST00000518928 SH3BP5LQ7L8J4 393 aa17.48■□□□□ 0.39
TSNARE1-203ENST00000518928 FAM43AQ8N2R8 423 aa17.48■□□□□ 0.39
TSNARE1-203ENST00000518928 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.48■□□□□ 0.39
TSNARE1-203ENST00000518928 DDX4Q9NQI0 724 aaKnown RBP17.48■□□□□ 0.39
TSNARE1-203ENST00000518928 USP40Q9NVE5 1235 aa17.48■□□□□ 0.39
TSNARE1-203ENST00000518928 GNL3LQ9NVN8 582 aaKnown RBP17.48■□□□□ 0.39
TSNARE1-203ENST00000518928 ABCF2Q9UG63 623 aa17.48■□□□□ 0.39
TSNARE1-203ENST00000518928 ATRNL1Q5VV63 1379 aa17.48■□□□□ 0.39
TSNARE1-203ENST00000518928 GAKO14976 1311 aa17.47■□□□□ 0.39
TSNARE1-203ENST00000518928 TESPA1A2RU30 521 aaPredicted RBP17.47■□□□□ 0.39
TSNARE1-203ENST00000518928 SEMA3EO15041 775 aa17.47■□□□□ 0.39
TSNARE1-203ENST00000518928 MCAMP43121 646 aa17.47■□□□□ 0.39
TSNARE1-203ENST00000518928 FKBP1CQ5VVH2 108 aa17.47■□□□□ 0.39
TSNARE1-203ENST00000518928 TLR7Q9NYK1 1049 aaKnown RBP17.47■□□□□ 0.39
TSNARE1-203ENST00000518928 TMOD2Q9NZR1 351 aa17.47■□□□□ 0.39
TSNARE1-203ENST00000518928 HPS5Q9UPZ3 1129 aa17.47■□□□□ 0.39
TSNARE1-203ENST00000518928 RPAP1Q9BWH6 1393 aaPredicted RBP17.47■□□□□ 0.39
TSNARE1-203ENST00000518928 ZSWIM8A7E2V4 1837 aa17.47■□□□□ 0.39
TSNARE1-203ENST00000518928 FKTNO75072 461 aa17.46■□□□□ 0.39
TSNARE1-203ENST00000518928 RGS3P49796 1198 aa17.46■□□□□ 0.39
TSNARE1-203ENST00000518928 ATP8B2P98198 1209 aa17.46■□□□□ 0.39
TSNARE1-203ENST00000518928 MECOMQ03112 1051 aa17.46■□□□□ 0.39
TSNARE1-203ENST00000518928 SSH3Q8TE77 659 aa17.46■□□□□ 0.39
TSNARE1-203ENST00000518928 FAM151AQ8WW52 585 aa17.46■□□□□ 0.39
TSNARE1-203ENST00000518928 DBNDD2Q9BQY9 259 aa17.46■□□□□ 0.39
TSNARE1-203ENST00000518928 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.46■□□□□ 0.39
TSNARE1-203ENST00000518928 DDX19BQ9UMR2 479 aa17.46■□□□□ 0.39
TSNARE1-203ENST00000518928 CENPFP49454 3210 aa17.45■□□□□ 0.38
TSNARE1-203ENST00000518928 CCL15-CCL14A0A0B4J2E2 113 aa17.45■□□□□ 0.38
TSNARE1-203ENST00000518928 SPDYE5A6NIY4 337 aa17.45■□□□□ 0.38
TSNARE1-203ENST00000518928 UNCXA6NJT0 531 aa17.45■□□□□ 0.38
TSNARE1-203ENST00000518928 IRF6O14896 467 aa17.45■□□□□ 0.38
TSNARE1-203ENST00000518928 WDHD1O75717 1129 aaPredicted RBP17.45■□□□□ 0.38
TSNARE1-203ENST00000518928 RGS19P49795 217 aa17.45■□□□□ 0.38
TSNARE1-203ENST00000518928 RRP1P56182 461 aaKnown RBP17.45■□□□□ 0.38
TSNARE1-203ENST00000518928 G3BP1Q13283 466 aaKnown RBP eCLIP17.45■□□□□ 0.38
TSNARE1-203ENST00000518928 CCL15Q16663 113 aa17.45■□□□□ 0.38
TSNARE1-203ENST00000518928 SNRKQ9NRH2 765 aa17.45■□□□□ 0.38
TSNARE1-203ENST00000518928 ZBTB40Q9NUA8 1239 aa17.45■□□□□ 0.38
TSNARE1-203ENST00000518928 DDTLA6NHG4 134 aaPredicted RBP17.44■□□□□ 0.38
TSNARE1-203ENST00000518928 ZBTB22O15209 634 aa17.44■□□□□ 0.38
TSNARE1-203ENST00000518928 ARID4AP29374 1257 aaPredicted RBP17.44■□□□□ 0.38
TSNARE1-203ENST00000518928 BTDP43251 543 aa17.44■□□□□ 0.38
TSNARE1-203ENST00000518928 NOM1Q5C9Z4 860 aaKnown RBP17.44■□□□□ 0.38
TSNARE1-203ENST00000518928 CD99L2Q8TCZ2 262 aa17.44■□□□□ 0.38
TSNARE1-203ENST00000518928 AKAP2Q9Y2D5 859 aa17.44■□□□□ 0.38
TSNARE1-203ENST00000518928 CSADQ9Y600 493 aa17.44■□□□□ 0.38
TSNARE1-203ENST00000518928 TNRC18O15417 2968 aaPredicted RBP17.44■□□□□ 0.38
TSNARE1-203ENST00000518928 PDS5AQ29RF7 1337 aaKnown RBP17.44■□□□□ 0.38
TSNARE1-203ENST00000518928 INHBEP58166 350 aa17.43■□□□□ 0.38
TSNARE1-203ENST00000518928 RHBDL3P58872 404 aa17.43■□□□□ 0.38
TSNARE1-203ENST00000518928 TNNI3KQ59H18 835 aa17.43■□□□□ 0.38
TSNARE1-203ENST00000518928 CEP85Q6P2H3 762 aa17.43■□□□□ 0.38
TSNARE1-203ENST00000518928 DZIP1Q86YF9 867 aaKnown RBP17.43■□□□□ 0.38
TSNARE1-203ENST00000518928 SPATA5Q8NB90 893 aa17.43■□□□□ 0.38
TSNARE1-203ENST00000518928 ZNF112Q9UJU3 913 aa17.43■□□□□ 0.38
TSNARE1-203ENST00000518928 FPGT-TNNI3KV9GXZ4 949 aa17.43■□□□□ 0.38
TSNARE1-203ENST00000518928 MYO5AQ9Y4I1 1855 aaKnown RBP17.43■□□□□ 0.38
TSNARE1-203ENST00000518928 MROH7-TTC4A0A0A0MT08 1334 aa17.43■□□□□ 0.38
TSNARE1-203ENST00000518928 DOCK2Q92608 1830 aa17.42■□□□□ 0.38
TSNARE1-203ENST00000518928 BRCA2P51587 3418 aa17.42■□□□□ 0.38
TSNARE1-203ENST00000518928 BTBD19C9JJ37 291 aa17.42■□□□□ 0.38
TSNARE1-203ENST00000518928 SURF6O75683 361 aaKnown RBP17.42■□□□□ 0.38
TSNARE1-203ENST00000518928 ALDH1A1P00352 501 aa17.42■□□□□ 0.38
TSNARE1-203ENST00000518928 PICALMQ13492 652 aa17.42■□□□□ 0.38
TSNARE1-203ENST00000518928 OTOP1Q7RTM1 612 aa17.42■□□□□ 0.38
TSNARE1-203ENST00000518928 CCDC84Q86UT8 332 aaPredicted RBP17.42■□□□□ 0.38
TSNARE1-203ENST00000518928 NSUN4Q96CB9 384 aaKnown RBP17.42■□□□□ 0.38
TSNARE1-203ENST00000518928 IDI2Q9BXS1 227 aa17.42■□□□□ 0.38
TSNARE1-203ENST00000518928 ZNF341Q9BYN7 854 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms