RNA–Protein interactions for RNA: ENST00000518528.1

PVT1-207, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 624 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-207ENST00000518528 PXYLP1Q8TE99 480 aa11.28□□□□□ -0.6
PVT1-207ENST00000518528 FAM84BQ96KN1 310 aaPredicted RBP11.28□□□□□ -0.6
PVT1-207ENST00000518528 ZDHHC15Q96MV8 337 aa11.28□□□□□ -0.6
PVT1-207ENST00000518528 DEFB118Q96PH6 123 aa11.28□□□□□ -0.6
PVT1-207ENST00000518528 KCNH4Q9UQ05 1017 aa11.28□□□□□ -0.6
PVT1-207ENST00000518528 RANBP2P49792 3224 aaKnown RBP11.28□□□□□ -0.6
PVT1-207ENST00000518528 ADGRA2Q96PE1 1338 aa11.28□□□□□ -0.6
PVT1-207ENST00000518528 CXCL11O14625 94 aa11.27□□□□□ -0.61
PVT1-207ENST00000518528 INHAP05111 366 aa11.27□□□□□ -0.61
PVT1-207ENST00000518528 FOXO4P98177 505 aa11.27□□□□□ -0.61
PVT1-207ENST00000518528 G2E3Q7L622 706 aa11.27□□□□□ -0.61
PVT1-207ENST00000518528 FASTKD5Q7L8L6 764 aaKnown RBP11.27□□□□□ -0.61
PVT1-207ENST00000518528 SUGT1Q9Y2Z0 365 aa11.27□□□□□ -0.61
PVT1-207ENST00000518528 SZT2Q5T011 3432 aa11.27□□□□□ -0.61
PVT1-207ENST00000518528 BRCA2P51587 3418 aa11.26□□□□□ -0.61
PVT1-207ENST00000518528 TNPO2O14787 897 aaKnown RBP11.26□□□□□ -0.61
PVT1-207ENST00000518528 BCRP11274 1271 aa11.26□□□□□ -0.61
PVT1-207ENST00000518528 INPP5BP32019 993 aa11.26□□□□□ -0.61
PVT1-207ENST00000518528 FLT3LGP49771 235 aa11.26□□□□□ -0.61
PVT1-207ENST00000518528 IRF5Q13568 498 aa11.26□□□□□ -0.61
PVT1-207ENST00000518528 LRIT3Q3SXY7 679 aa11.26□□□□□ -0.61
PVT1-207ENST00000518528 MIGA2Q7L4E1 593 aa11.26□□□□□ -0.61
PVT1-207ENST00000518528 COA7Q96BR5 231 aa11.26□□□□□ -0.61
PVT1-207ENST00000518528 PAWRQ96IZ0 340 aaKnown RBP11.26□□□□□ -0.61
PVT1-207ENST00000518528 ZNF594Q96JF6 807 aaPredicted RBP11.26□□□□□ -0.61
PVT1-207ENST00000518528 GDF15Q99988 308 aa11.26□□□□□ -0.61
PVT1-207ENST00000518528 RPAP1Q9BWH6 1393 aaPredicted RBP11.26□□□□□ -0.61
PVT1-207ENST00000518528 LAMB1P07942 1786 aa11.26□□□□□ -0.61
PVT1-207ENST00000518528 ELNP15502 786 aa11.25□□□□□ -0.61
PVT1-207ENST00000518528 NOL9Q5SY16 702 aaKnown RBP11.25□□□□□ -0.61
PVT1-207ENST00000518528 C7orf61Q8IZ16 206 aa11.25□□□□□ -0.61
PVT1-207ENST00000518528 ANKLE1Q8NAG6 615 aa11.25□□□□□ -0.61
PVT1-207ENST00000518528 SMCR8Q8TEV9 937 aaPredicted RBP11.25□□□□□ -0.61
PVT1-207ENST00000518528 FAM151AQ8WW52 585 aa11.25□□□□□ -0.61
PVT1-207ENST00000518528 TSR2Q969E8 191 aaKnown RBP11.25□□□□□ -0.61
PVT1-207ENST00000518528 PICK1Q9NRD5 415 aa11.25□□□□□ -0.61
PVT1-207ENST00000518528 C9orf78Q9NZ63 289 aaPredicted RBP11.25□□□□□ -0.61
PVT1-207ENST00000518528 ZNF112Q9UJU3 913 aa11.25□□□□□ -0.61
PVT1-207ENST00000518528 TAOK2Q9UL54 1235 aa11.25□□□□□ -0.61
PVT1-207ENST00000518528 GABRQQ9UN88 632 aa11.25□□□□□ -0.61
PVT1-207ENST00000518528 MROH5Q6ZUA9 1318 aa11.25□□□□□ -0.61
PVT1-207ENST00000518528 ZNF646O15015 1829 aaPredicted RBP11.25□□□□□ -0.61
PVT1-207ENST00000518528 CYP2C8P10632 490 aa11.24□□□□□ -0.61
PVT1-207ENST00000518528 BCAMP50895 628 aa11.24□□□□□ -0.61
PVT1-207ENST00000518528 APOBEC3HQ6NTF7 200 aaKnown RBP11.24□□□□□ -0.61
PVT1-207ENST00000518528 HHIPL2Q6UWX4 724 aa11.24□□□□□ -0.61
PVT1-207ENST00000518528 FBXO33Q7Z6M2 555 aa11.24□□□□□ -0.61
PVT1-207ENST00000518528 TDHQ8IZJ6 230 aa11.24□□□□□ -0.61
PVT1-207ENST00000518528 NBPF3Q9H094 633 aa11.24□□□□□ -0.61
PVT1-207ENST00000518528 CRISPLD2Q9H0B8 497 aa11.24□□□□□ -0.61
PVT1-207ENST00000518528 PAK6Q9NQU5 681 aaPredicted RBP11.24□□□□□ -0.61
PVT1-207ENST00000518528 MTMR10Q9NXD2 777 aa11.24□□□□□ -0.61
PVT1-207ENST00000518528 ZMYND8Q9ULU4 1186 aaPredicted RBP11.24□□□□□ -0.61
PVT1-207ENST00000518528 IQSEC3Q9UPP2 1182 aaPredicted RBP11.24□□□□□ -0.61
PVT1-207ENST00000518528 SLC45A1Q9Y2W3 748 aa11.24□□□□□ -0.61
PVT1-207ENST00000518528 GRM8O00222 908 aa11.23□□□□□ -0.61
PVT1-207ENST00000518528 ZEB1P37275 1124 aaPredicted RBP11.23□□□□□ -0.61
PVT1-207ENST00000518528 Q7L0L9 218 aa11.23□□□□□ -0.61
PVT1-207ENST00000518528 UBE2OQ9C0C9 1292 aaKnown RBP11.23□□□□□ -0.61
PVT1-207ENST00000518528 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.23□□□□□ -0.614e-6■■■□□ 17.4
PVT1-207ENST00000518528 TCP10Q12799 353 aa11.22□□□□□ -0.61
PVT1-207ENST00000518528 MOGSQ13724 837 aa11.22□□□□□ -0.61
PVT1-207ENST00000518528 GRIK5Q16478 980 aa11.22□□□□□ -0.61
PVT1-207ENST00000518528 METTL24Q5JXM2 366 aa11.22□□□□□ -0.61
PVT1-207ENST00000518528 BEND3Q5T5X7 828 aa11.22□□□□□ -0.61
PVT1-207ENST00000518528 GPAT2Q6NUI2 795 aa11.22□□□□□ -0.61
PVT1-207ENST00000518528 GADL1Q6ZQY3 521 aa11.22□□□□□ -0.61
PVT1-207ENST00000518528 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.22□□□□□ -0.61
PVT1-207ENST00000518528 COL25A1Q9BXS0 654 aaPredicted RBP11.22□□□□□ -0.61
PVT1-207ENST00000518528 ZHX2Q9Y6X8 837 aa11.22□□□□□ -0.61
PVT1-207ENST00000518528 MYH3P11055 1940 aa11.21□□□□□ -0.61
PVT1-207ENST00000518528 ECM29Q5VYK3 1845 aa11.21□□□□□ -0.61
PVT1-207ENST00000518528 SPEF2Q9C093 1822 aa11.21□□□□□ -0.61
PVT1-207ENST00000518528 A0A0G2JLL6 359 aaPredicted RBP11.21□□□□□ -0.61
PVT1-207ENST00000518528 IFIT1P09914 478 aaKnown RBP11.21□□□□□ -0.61
PVT1-207ENST00000518528 MAGEA10P43363 369 aaPredicted RBP11.21□□□□□ -0.61
PVT1-207ENST00000518528 EPHA10Q5JZY3 1008 aa11.21□□□□□ -0.61
PVT1-207ENST00000518528 PRRT2Q7Z6L0 340 aaPredicted RBP11.21□□□□□ -0.61
PVT1-207ENST00000518528 WDR66Q8TBY9 1149 aa11.21□□□□□ -0.61
PVT1-207ENST00000518528 C11orf49Q9H6J7 331 aa11.21□□□□□ -0.61
PVT1-207ENST00000518528 PNMA3Q9UL41 463 aa11.21□□□□□ -0.61
PVT1-207ENST00000518528 OTOFQ9HC10 1997 aa11.21□□□□□ -0.62
PVT1-207ENST00000518528 ALDH1L1O75891 902 aa11.2□□□□□ -0.62
PVT1-207ENST00000518528 HMGCRP04035 888 aa11.2□□□□□ -0.62
PVT1-207ENST00000518528 SCYL3Q8IZE3 742 aa11.2□□□□□ -0.62
PVT1-207ENST00000518528 DIS3LQ8TF46 1054 aaKnown RBP11.2□□□□□ -0.62
PVT1-207ENST00000518528 PUS3Q9BZE2 481 aaKnown RBP11.2□□□□□ -0.62
PVT1-207ENST00000518528 HMX1Q9NP08 348 aaPredicted RBP11.2□□□□□ -0.62
PVT1-207ENST00000518528 LRRFIP2Q9Y608 721 aaKnown RBP11.2□□□□□ -0.62
PVT1-207ENST00000518528 IL16Q14005 1332 aa11.19□□□□□ -0.62
PVT1-207ENST00000518528 RPTORQ8N122 1335 aa11.19□□□□□ -0.62
PVT1-207ENST00000518528 F6X3S4 739 aa11.19□□□□□ -0.62
PVT1-207ENST00000518528 SYN1P17600 705 aa11.19□□□□□ -0.62
PVT1-207ENST00000518528 DDX10Q13206 875 aaKnown RBP11.19□□□□□ -0.62
PVT1-207ENST00000518528 CCDC27Q2M243 656 aa11.19□□□□□ -0.62
PVT1-207ENST00000518528 KIF16BQ96L93 1317 aa11.18□□□□□ -0.62
PVT1-207ENST00000518528 PDE8BO95263 885 aa11.18□□□□□ -0.62
PVT1-207ENST00000518528 PTPRAP18433 802 aa11.18□□□□□ -0.62
PVT1-207ENST00000518528 GCLCP48506 637 aaPredicted RBP11.18□□□□□ -0.62
PVT1-207ENST00000518528 PABPC4Q13310 644 aaKnown RBP eCLIP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms