RNA–Protein interactions for RNA: ENST00000518293.5

PABPC1-206, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-206ENST00000518293 C12orf49Q9H741 205 aa6.56□□□□□ -1.36
PABPC1-206ENST00000518293 PARP2Q9UGN5 583 aa6.56□□□□□ -1.36
PABPC1-206ENST00000518293 XRCC5P13010 732 aaKnown RBP6.55□□□□□ -1.36
PABPC1-206ENST00000518293 MAP4P27816 1152 aaKnown RBP6.55□□□□□ -1.36
PABPC1-206ENST00000518293 ZNF157P51786 506 aaPredicted RBP6.55□□□□□ -1.36
PABPC1-206ENST00000518293 FGD1P98174 961 aa6.55□□□□□ -1.36
PABPC1-206ENST00000518293 FRMD6Q96NE9 622 aa6.55□□□□□ -1.36
PABPC1-206ENST00000518293 TRIM56Q9BRZ2 755 aaKnown RBP6.55□□□□□ -1.36
PABPC1-206ENST00000518293 USP26Q9BXU7 913 aa6.55□□□□□ -1.36
PABPC1-206ENST00000518293 KRTAP9-9Q9BYP9 154 aa6.55□□□□□ -1.36
PABPC1-206ENST00000518293 KRTAP9-4Q9BYQ2 154 aa6.55□□□□□ -1.36
PABPC1-206ENST00000518293 CYP4F12Q9HCS2 524 aa6.55□□□□□ -1.36
PABPC1-206ENST00000518293 ATG3Q9NT62 314 aa6.55□□□□□ -1.36
PABPC1-206ENST00000518293 AKAP2Q9Y2D5 859 aa6.55□□□□□ -1.36
PABPC1-206ENST00000518293 RNF114Q9Y508 228 aa6.55□□□□□ -1.36
PABPC1-206ENST00000518293 AK5Q9Y6K8 562 aa6.55□□□□□ -1.36
PABPC1-206ENST00000518293 DLGAP3O95886 979 aa6.54□□□□□ -1.36
PABPC1-206ENST00000518293 GSTT1P30711 240 aa6.54□□□□□ -1.36
PABPC1-206ENST00000518293 SGO2Q562F6 1265 aa6.54□□□□□ -1.36
PABPC1-206ENST00000518293 C12orf50Q8NA57 414 aaPredicted RBP6.54□□□□□ -1.36
PABPC1-206ENST00000518293 FAM161BQ96MY7 647 aa6.54□□□□□ -1.36
PABPC1-206ENST00000518293 ZFYVE1Q9HBF4 777 aa6.54□□□□□ -1.36
PABPC1-206ENST00000518293 PIM2Q9P1W9 311 aa6.54□□□□□ -1.36
PABPC1-206ENST00000518293 FAM8A1Q9UBU6 413 aa6.54□□□□□ -1.36
PABPC1-206ENST00000518293 LOC100289279A0A1B0GTE1 492 aa6.53□□□□□ -1.36
PABPC1-206ENST00000518293 USP17L7P0C7H9 530 aa6.53□□□□□ -1.36
PABPC1-206ENST00000518293 YBX3P16989 372 aaKnown RBP eCLIP6.53□□□□□ -1.36
PABPC1-206ENST00000518293 DAB2P98082 770 aa6.53□□□□□ -1.36
PABPC1-206ENST00000518293 BCL2L13Q9BXK5 485 aa6.53□□□□□ -1.36
PABPC1-206ENST00000518293 LEMD3Q9Y2U8 911 aa6.53□□□□□ -1.36
PABPC1-206ENST00000518293 ECEL1O95672 775 aa6.52□□□□□ -1.37
PABPC1-206ENST00000518293 CTSBP07858 339 aa6.52□□□□□ -1.37
PABPC1-206ENST00000518293 EIF4BP23588 611 aaKnown RBP6.52□□□□□ -1.37
PABPC1-206ENST00000518293 TMC4Q7Z404 712 aa6.52□□□□□ -1.37
PABPC1-206ENST00000518293 FBXL6Q8N531 539 aa6.52□□□□□ -1.37
PABPC1-206ENST00000518293 SMG8Q8ND04 991 aaKnown RBP6.52□□□□□ -1.37
PABPC1-206ENST00000518293 OSBPL1AQ9BXW6 950 aa6.52□□□□□ -1.37
PABPC1-206ENST00000518293 TMPRSS13Q9BYE2 586 aa6.52□□□□□ -1.37
PABPC1-206ENST00000518293 SUGCTQ9HAC7 445 aa6.52□□□□□ -1.37
PABPC1-206ENST00000518293 TMEM39AQ9NV64 488 aa6.52□□□□□ -1.37
PABPC1-206ENST00000518293 ANGEL1Q9UNK9 670 aaKnown RBP6.52□□□□□ -1.37
PABPC1-206ENST00000518293 FBXO24O75426 580 aa6.51□□□□□ -1.37
PABPC1-206ENST00000518293 CYP11A1P05108 521 aa6.51□□□□□ -1.37
PABPC1-206ENST00000518293 MAOBP27338 520 aa6.51□□□□□ -1.37
PABPC1-206ENST00000518293 HOXA10P31260 410 aaPredicted RBP6.51□□□□□ -1.37
PABPC1-206ENST00000518293 USP11P51784 963 aa6.51□□□□□ -1.37
PABPC1-206ENST00000518293 XPCQ01831 940 aaPredicted RBP6.51□□□□□ -1.37
PABPC1-206ENST00000518293 PSMD2Q13200 908 aa6.51□□□□□ -1.37
PABPC1-206ENST00000518293 POU4F3Q15319 338 aa6.51□□□□□ -1.37
PABPC1-206ENST00000518293 NFKBIBQ15653 356 aa6.51□□□□□ -1.37
PABPC1-206ENST00000518293 GIPC2Q8TF65 315 aa6.51□□□□□ -1.37
PABPC1-206ENST00000518293 NECAB3Q96P71 396 aaPredicted RBP6.51□□□□□ -1.37
PABPC1-206ENST00000518293 GPN3Q9UHW5 284 aaPredicted RBP6.51□□□□□ -1.37
PABPC1-206ENST00000518293 PPM1HQ9ULR3 514 aa6.51□□□□□ -1.37
PABPC1-206ENST00000518293 FAM95CA0A1B0GW59 222 aa6.5□□□□□ -1.37
PABPC1-206ENST00000518293 EIF4EBP3O60516 100 aaPredicted RBP6.5□□□□□ -1.37
PABPC1-206ENST00000518293 TIAF1O95411 115 aa6.5□□□□□ -1.37
PABPC1-206ENST00000518293 F13BP05160 661 aa6.5□□□□□ -1.37
PABPC1-206ENST00000518293 CTSHP09668 335 aa6.5□□□□□ -1.37
PABPC1-206ENST00000518293 CPSF6Q16630 551 aaKnown RBP eCLIP6.5□□□□□ -1.37
PABPC1-206ENST00000518293 EXOSC6Q5RKV6 272 aaKnown RBP6.5□□□□□ -1.37
PABPC1-206ENST00000518293 PAOXQ6QHF9 649 aa6.5□□□□□ -1.37
PABPC1-206ENST00000518293 TPTE2Q6XPS3 522 aa6.5□□□□□ -1.37
PABPC1-206ENST00000518293 DDX54Q8TDD1 881 aaKnown RBP6.5□□□□□ -1.37
PABPC1-206ENST00000518293 STK35Q8TDR2 534 aa6.5□□□□□ -1.37
PABPC1-206ENST00000518293 ANKRD24Q8TF21 1146 aa6.5□□□□□ -1.37
PABPC1-206ENST00000518293 KRTAP4-8A0A0G2JLE6 195 aa6.49□□□□□ -1.37
PABPC1-206ENST00000518293 ENC1O14682 589 aa6.49□□□□□ -1.37
PABPC1-206ENST00000518293 FOSL1P15407 271 aa6.49□□□□□ -1.37
PABPC1-206ENST00000518293 ZNF16P17020 682 aaPredicted RBP6.49□□□□□ -1.37
PABPC1-206ENST00000518293 PPP2R3AQ06190 1150 aa6.49□□□□□ -1.37
PABPC1-206ENST00000518293 AP3B2Q13367 1082 aa6.49□□□□□ -1.37
PABPC1-206ENST00000518293 METTL22Q9BUU2 404 aaPredicted RBP6.49□□□□□ -1.37
PABPC1-206ENST00000518293 YIPF2Q9BWQ6 316 aa6.49□□□□□ -1.37
PABPC1-206ENST00000518293 ADGRE2Q9UHX3 823 aa6.49□□□□□ -1.37
PABPC1-206ENST00000518293 PAGE1O75459 146 aa6.48□□□□□ -1.37
PABPC1-206ENST00000518293 DRD2P14416 443 aa6.48□□□□□ -1.37
PABPC1-206ENST00000518293 ZNF326Q5BKZ1 582 aaKnown RBP6.48□□□□□ -1.37
PABPC1-206ENST00000518293 MEI1Q5TIA1 1274 aa6.48□□□□□ -1.37
PABPC1-206ENST00000518293 PDZD3Q86UT5 571 aa6.48□□□□□ -1.37
PABPC1-206ENST00000518293 FBLIM1Q8WUP2 373 aa6.48□□□□□ -1.37
PABPC1-206ENST00000518293 CORO1BQ9BR76 489 aa6.48□□□□□ -1.37
PABPC1-206ENST00000518293 CEP44Q9C0F1 390 aa6.48□□□□□ -1.37
PABPC1-206ENST00000518293 SORBS3O60504 671 aa6.47□□□□□ -1.37
PABPC1-206ENST00000518293 CELA3AP09093 270 aa6.47□□□□□ -1.37
PABPC1-206ENST00000518293 BMP6P22004 513 aa6.47□□□□□ -1.37
PABPC1-206ENST00000518293 MSMPQ1L6U9 139 aa6.47□□□□□ -1.37
PABPC1-206ENST00000518293 ABI1Q8IZP0 508 aa6.47□□□□□ -1.37
PABPC1-206ENST00000518293 RGS22Q8NE09 1264 aa6.47□□□□□ -1.37
PABPC1-206ENST00000518293 TBC1D32Q96NH3 1257 aa6.47□□□□□ -1.37
PABPC1-206ENST00000518293 ZC3H12CQ9C0D7 883 aaKnown RBP6.47□□□□□ -1.37
PABPC1-206ENST00000518293 CCDC86Q9H6F5 360 aaKnown RBP6.47□□□□□ -1.37
PABPC1-206ENST00000518293 TTF2Q9UNY4 1162 aaKnown RBP6.47□□□□□ -1.37
PABPC1-206ENST00000518293 RBM47A0AV96 593 aaKnown RBP6.46□□□□□ -1.38
PABPC1-206ENST00000518293 CYP26A1O43174 497 aa6.46□□□□□ -1.38
PABPC1-206ENST00000518293 GSTP1P09211 210 aaKnown RBP6.46□□□□□ -1.38
PABPC1-206ENST00000518293 NME2P22392 152 aa6.46□□□□□ -1.38
PABPC1-206ENST00000518293 ARNTP27540 789 aa6.46□□□□□ -1.38
PABPC1-206ENST00000518293 SOX4Q06945 474 aaPredicted RBP6.46□□□□□ -1.38
PABPC1-206ENST00000518293 RASIP1Q5U651 963 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms