RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 UNCXA6NJT0 531 aa13.03□□□□□ -0.32
SPIDR-205ENST00000518060 SURF6O75683 361 aaKnown RBP13.03□□□□□ -0.32
SPIDR-205ENST00000518060 ALDH1A1P00352 501 aa13.03□□□□□ -0.32
SPIDR-205ENST00000518060 FKBP1CQ5VVH2 108 aa13.03□□□□□ -0.32
SPIDR-205ENST00000518060 DCAF15Q66K64 600 aa13.03□□□□□ -0.32
SPIDR-205ENST00000518060 OTUD7BQ6GQQ9 843 aa13.03□□□□□ -0.32
SPIDR-205ENST00000518060 MIGA2Q7L4E1 593 aa13.03□□□□□ -0.32
SPIDR-205ENST00000518060 CTU1Q7Z7A3 348 aaKnown RBP13.03□□□□□ -0.32
SPIDR-205ENST00000518060 IFNL1Q8IU54 200 aa13.03□□□□□ -0.32
SPIDR-205ENST00000518060 SLF2Q8IX21 1173 aa13.03□□□□□ -0.32
SPIDR-205ENST00000518060 ZNF296Q8WUU4 475 aaPredicted RBP13.03□□□□□ -0.32
SPIDR-205ENST00000518060 CNKSR2Q8WXI2 1034 aa13.03□□□□□ -0.32
SPIDR-205ENST00000518060 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.03□□□□□ -0.32
SPIDR-205ENST00000518060 AKAP11Q9UKA4 1901 aa13.02□□□□□ -0.32
SPIDR-205ENST00000518060 GPR25O00155 361 aa13.02□□□□□ -0.33
SPIDR-205ENST00000518060 GJA5P36382 358 aa13.02□□□□□ -0.33
SPIDR-205ENST00000518060 INHBEP58166 350 aa13.02□□□□□ -0.33
SPIDR-205ENST00000518060 NFIAQ12857 509 aa13.02□□□□□ -0.33
SPIDR-205ENST00000518060 TTC39AQ5SRH9 613 aa13.02□□□□□ -0.33
SPIDR-205ENST00000518060 PI16Q6UXB8 463 aa13.02□□□□□ -0.33
SPIDR-205ENST00000518060 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.02□□□□□ -0.33
SPIDR-205ENST00000518060 ERICH6Q7L0X2 663 aa13.02□□□□□ -0.33
SPIDR-205ENST00000518060 ZSCAN29Q8IWY8 852 aaPredicted RBP13.02□□□□□ -0.33
SPIDR-205ENST00000518060 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.02□□□□□ -0.33
SPIDR-205ENST00000518060 RAI14Q9P0K7 980 aa13.02□□□□□ -0.33
SPIDR-205ENST00000518060 IGF2BP3O00425 579 aaKnown RBP eCLIP13.01□□□□□ -0.33
SPIDR-205ENST00000518060 BTDP43251 543 aa13.01□□□□□ -0.33
SPIDR-205ENST00000518060 ATP8B2P98198 1209 aa13.01□□□□□ -0.33
SPIDR-205ENST00000518060 PICALMQ13492 652 aa13.01□□□□□ -0.33
SPIDR-205ENST00000518060 POLA2Q14181 598 aa13.01□□□□□ -0.33
SPIDR-205ENST00000518060 SPATA5Q8NB90 893 aa13.01□□□□□ -0.33
SPIDR-205ENST00000518060 FAM151AQ8WW52 585 aa13.01□□□□□ -0.33
SPIDR-205ENST00000518060 ZNF341Q9BYN7 854 aa13.01□□□□□ -0.33
SPIDR-205ENST00000518060 BCL11AQ9H165 835 aa13.01□□□□□ -0.33
SPIDR-205ENST00000518060 HMG20BQ9P0W2 317 aa13.01□□□□□ -0.33
SPIDR-205ENST00000518060 PDS5AQ29RF7 1337 aaKnown RBP13.01□□□□□ -0.33
SPIDR-205ENST00000518060 RPAP1Q9BWH6 1393 aaPredicted RBP13.01□□□□□ -0.33
SPIDR-205ENST00000518060 MROH7-TTC4A0A0A0MT08 1334 aa13□□□□□ -0.33
SPIDR-205ENST00000518060 CCL15-CCL14A0A0B4J2E2 113 aa13□□□□□ -0.33
SPIDR-205ENST00000518060 ZBTB7BO15156 539 aaPredicted RBP13□□□□□ -0.33
SPIDR-205ENST00000518060 FKTNO75072 461 aa13□□□□□ -0.33
SPIDR-205ENST00000518060 UQCRFS1P1P0C7P4 283 aa13□□□□□ -0.33
SPIDR-205ENST00000518060 MS4A1P11836 297 aa13□□□□□ -0.33
SPIDR-205ENST00000518060 RGS3P49796 1198 aa13□□□□□ -0.33
SPIDR-205ENST00000518060 CCL15Q16663 113 aa13□□□□□ -0.33
SPIDR-205ENST00000518060 TNNI3KQ59H18 835 aa13□□□□□ -0.33
SPIDR-205ENST00000518060 CCDC158Q5M9N0 1113 aa13□□□□□ -0.33
SPIDR-205ENST00000518060 TBC1D9Q6ZT07 1266 aa13□□□□□ -0.33
SPIDR-205ENST00000518060 SSH3Q8TE77 659 aa13□□□□□ -0.33
SPIDR-205ENST00000518060 ZKSCAN4Q969J2 545 aaPredicted RBP13□□□□□ -0.33
SPIDR-205ENST00000518060 DBNDD2Q9BQY9 259 aa13□□□□□ -0.33
SPIDR-205ENST00000518060 R3HDMLQ9H3Y0 253 aa13□□□□□ -0.33
SPIDR-205ENST00000518060 SNRKQ9NRH2 765 aa13□□□□□ -0.33
SPIDR-205ENST00000518060 LRP2BPQ9P2M1 347 aa13□□□□□ -0.33
SPIDR-205ENST00000518060 FPGT-TNNI3KV9GXZ4 949 aa13□□□□□ -0.33
SPIDR-205ENST00000518060 ARID4AP29374 1257 aaPredicted RBP12.99□□□□□ -0.33
SPIDR-205ENST00000518060 GTF2A2P52657 109 aa12.99□□□□□ -0.33
SPIDR-205ENST00000518060 GSTO1P78417 241 aa12.99□□□□□ -0.33
SPIDR-205ENST00000518060 MECOMQ03112 1051 aa12.99□□□□□ -0.33
SPIDR-205ENST00000518060 NOL10Q9BSC4 688 aaKnown RBP12.99□□□□□ -0.33
SPIDR-205ENST00000518060 FAM198AQ9UFP1 575 aa12.99□□□□□ -0.33
SPIDR-205ENST00000518060 SNCAIPQ9Y6H5 919 aa12.99□□□□□ -0.33
SPIDR-205ENST00000518060 OTOFQ9HC10 1997 aa12.99□□□□□ -0.33
SPIDR-205ENST00000518060 GAKO14976 1311 aa12.98□□□□□ -0.33
SPIDR-205ENST00000518060 SPDYE5A6NIY4 337 aa12.98□□□□□ -0.33
SPIDR-205ENST00000518060 APBB1O00213 710 aa12.98□□□□□ -0.33
SPIDR-205ENST00000518060 INPP5BP32019 993 aa12.98□□□□□ -0.33
SPIDR-205ENST00000518060 MCAMP43121 646 aa12.98□□□□□ -0.33
SPIDR-205ENST00000518060 CRHR2Q13324 411 aa12.98□□□□□ -0.33
SPIDR-205ENST00000518060 CEP85Q6P2H3 762 aa12.98□□□□□ -0.33
SPIDR-205ENST00000518060 ERO1BQ86YB8 467 aa12.98□□□□□ -0.33
SPIDR-205ENST00000518060 ZFPM1Q8IX07 1006 aa12.98□□□□□ -0.33
SPIDR-205ENST00000518060 BRI3BPQ8WY22 251 aa12.98□□□□□ -0.33
SPIDR-205ENST00000518060 RCAN3Q9UKA8 241 aa12.98□□□□□ -0.33
SPIDR-205ENST00000518060 EXOC6BQ9Y2D4 811 aa12.98□□□□□ -0.33
SPIDR-205ENST00000518060 WDHD1O75717 1129 aaPredicted RBP12.97□□□□□ -0.33
SPIDR-205ENST00000518060 LDHCP07864 332 aa12.97□□□□□ -0.33
SPIDR-205ENST00000518060 TAF1CQ15572 869 aaPredicted RBP12.97□□□□□ -0.33
SPIDR-205ENST00000518060 PTPN18Q99952 460 aa12.97□□□□□ -0.33
SPIDR-205ENST00000518060 CCDC8Q9H0W5 538 aaPredicted RBP12.97□□□□□ -0.33
SPIDR-205ENST00000518060 GPR108Q9NPR9 543 aa12.97□□□□□ -0.33
SPIDR-205ENST00000518060 COG6Q9Y2V7 657 aa12.97□□□□□ -0.33
SPIDR-205ENST00000518060 ENTPD3O75355 529 aa12.96□□□□□ -0.33
SPIDR-205ENST00000518060 CETPP11597 493 aa12.96□□□□□ -0.33
SPIDR-205ENST00000518060 SOX10P56693 466 aa12.96□□□□□ -0.33
SPIDR-205ENST00000518060 PPIL2Q13356 520 aa12.96□□□□□ -0.33
SPIDR-205ENST00000518060 SNAPC2Q13487 334 aa12.96□□□□□ -0.33
SPIDR-205ENST00000518060 ERC1Q8IUD2 1116 aa12.96□□□□□ -0.33
SPIDR-205ENST00000518060 MS4A4AQ96JQ5 239 aa12.96□□□□□ -0.33
SPIDR-205ENST00000518060 CFHR5Q9BXR6 569 aa12.96□□□□□ -0.33
SPIDR-205ENST00000518060 IDI2Q9BXS1 227 aa12.96□□□□□ -0.33
SPIDR-205ENST00000518060 TLR7Q9NYK1 1049 aaKnown RBP12.96□□□□□ -0.33
SPIDR-205ENST00000518060 DDX19BQ9UMR2 479 aa12.96□□□□□ -0.33
SPIDR-205ENST00000518060 HPS5Q9UPZ3 1129 aa12.96□□□□□ -0.33
SPIDR-205ENST00000518060 TRIM17Q9Y577 477 aa12.96□□□□□ -0.33
SPIDR-205ENST00000518060 GPR75-ASB3A0A0A6YYF3 556 aa12.95□□□□□ -0.34
SPIDR-205ENST00000518060 IRF6O14896 467 aa12.95□□□□□ -0.34
SPIDR-205ENST00000518060 ZBTB22O15209 634 aa12.95□□□□□ -0.34
SPIDR-205ENST00000518060 PKN2Q16513 984 aaKnown RBP12.95□□□□□ -0.34
SPIDR-205ENST00000518060 NOM1Q5C9Z4 860 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms