RNA–Protein interactions for RNA: ENST00000517488.1

PDGFRB-202, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-202ENST00000517488 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.33■□□□□ 0.36
PDGFRB-202ENST00000517488 DBNLQ9UJU6 430 aaKnown RBP17.33■□□□□ 0.36
PDGFRB-202ENST00000517488 GAKO14976 1311 aa17.32■□□□□ 0.36
PDGFRB-202ENST00000517488 NFIAQ12857 509 aa17.32■□□□□ 0.36
PDGFRB-202ENST00000517488 TTC39AQ5SRH9 613 aa17.32■□□□□ 0.36
PDGFRB-202ENST00000517488 SPTY2D1Q68D10 685 aaPredicted RBP17.32■□□□□ 0.36
PDGFRB-202ENST00000517488 ERICH6Q7L0X2 663 aa17.32■□□□□ 0.36
PDGFRB-202ENST00000517488 FAM83AQ86UY5 434 aa17.32■□□□□ 0.36
PDGFRB-202ENST00000517488 ZNF384Q8TF68 577 aa17.32■□□□□ 0.36
PDGFRB-202ENST00000517488 CHMP4BQ9H444 224 aaKnown RBP17.32■□□□□ 0.36
PDGFRB-202ENST00000517488 SNRKQ9NRH2 765 aa17.32■□□□□ 0.36
PDGFRB-202ENST00000517488 USP40Q9NVE5 1235 aa17.32■□□□□ 0.36
PDGFRB-202ENST00000517488 CA12O43570 354 aa17.31■□□□□ 0.36
PDGFRB-202ENST00000517488 IREB2P48200 963 aaKnown RBP17.31■□□□□ 0.36
PDGFRB-202ENST00000517488 MECOMQ03112 1051 aa17.31■□□□□ 0.36
PDGFRB-202ENST00000517488 CCDC158Q5M9N0 1113 aa17.31■□□□□ 0.36
PDGFRB-202ENST00000517488 ERC1Q8IUD2 1116 aa17.31■□□□□ 0.36
PDGFRB-202ENST00000517488 SLC10A4Q96EP9 437 aa17.31■□□□□ 0.36
PDGFRB-202ENST00000517488 FAM163AQ96GL9 167 aaPredicted RBP17.31■□□□□ 0.36
PDGFRB-202ENST00000517488 APBB1O00213 710 aa17.3■□□□□ 0.36
PDGFRB-202ENST00000517488 HMMRO75330 724 aa17.3■□□□□ 0.36
PDGFRB-202ENST00000517488 SPRYD7Q5W111 196 aa17.3■□□□□ 0.36
PDGFRB-202ENST00000517488 RHPN1Q8TCX5 695 aa17.3■□□□□ 0.36
PDGFRB-202ENST00000517488 IL1RAPL2Q9NP60 686 aa17.3■□□□□ 0.36
PDGFRB-202ENST00000517488 TCP10Q12799 353 aa17.29■□□□□ 0.36
PDGFRB-202ENST00000517488 HSP90AB4PQ58FF6 505 aa17.29■□□□□ 0.36
PDGFRB-202ENST00000517488 AACSQ86V21 672 aa17.29■□□□□ 0.36
PDGFRB-202ENST00000517488 TNS4Q8IZW8 715 aa17.29■□□□□ 0.36
PDGFRB-202ENST00000517488 NSUN4Q96CB9 384 aaKnown RBP17.29■□□□□ 0.36
PDGFRB-202ENST00000517488 ZNF512BQ96KM6 892 aaPredicted RBP17.29■□□□□ 0.36
PDGFRB-202ENST00000517488 RNF186Q9NXI6 227 aa17.29■□□□□ 0.36
PDGFRB-202ENST00000517488 RAI14Q9P0K7 980 aa17.29■□□□□ 0.36
PDGFRB-202ENST00000517488 FAM198AQ9UFP1 575 aa17.29■□□□□ 0.36
PDGFRB-202ENST00000517488 ECM29Q5VYK3 1845 aa17.28■□□□□ 0.36
PDGFRB-202ENST00000517488 MROH7-TTC4A0A0A0MT08 1334 aa17.28■□□□□ 0.36
PDGFRB-202ENST00000517488 UNCXA6NJT0 531 aa17.28■□□□□ 0.36
PDGFRB-202ENST00000517488 TRPA1O75762 1119 aa17.28■□□□□ 0.36
PDGFRB-202ENST00000517488 CYP2E1P05181 493 aaPredicted RBP17.28■□□□□ 0.36
PDGFRB-202ENST00000517488 BTDP43251 543 aa17.28■□□□□ 0.36
PDGFRB-202ENST00000517488 ZFPM1Q8IX07 1006 aa17.28■□□□□ 0.36
PDGFRB-202ENST00000517488 SLF2Q8IX21 1173 aa17.28■□□□□ 0.36
PDGFRB-202ENST00000517488 REM2Q8IYK8 340 aaPredicted RBP17.28■□□□□ 0.36
PDGFRB-202ENST00000517488 ANKRD13AQ8IZ07 590 aa17.28■□□□□ 0.36
PDGFRB-202ENST00000517488 FAM151AQ8WW52 585 aa17.28■□□□□ 0.36
PDGFRB-202ENST00000517488 LRP2BPQ9P2M1 347 aa17.28■□□□□ 0.36
PDGFRB-202ENST00000517488 GPR75-ASB3A0A0A6YYF3 556 aa17.27■□□□□ 0.36
PDGFRB-202ENST00000517488 GJA5P36382 358 aa17.27■□□□□ 0.36
PDGFRB-202ENST00000517488 ZAP70P43403 619 aa17.27■□□□□ 0.36
PDGFRB-202ENST00000517488 RRP1P56182 461 aaKnown RBP17.27■□□□□ 0.36
PDGFRB-202ENST00000517488 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.27■□□□□ 0.36
PDGFRB-202ENST00000517488 WNK4Q96J92 1243 aa17.27■□□□□ 0.36
PDGFRB-202ENST00000517488 PIH1D3Q9NQM4 214 aaKnown RBP17.27■□□□□ 0.36
PDGFRB-202ENST00000517488 MYH13Q9UKX3 1938 aa17.26■□□□□ 0.35
PDGFRB-202ENST00000517488 RGS3P49796 1198 aa17.26■□□□□ 0.35
PDGFRB-202ENST00000517488 MAP3K9P80192 1104 aa17.26■□□□□ 0.35
PDGFRB-202ENST00000517488 MIGA2Q7L4E1 593 aa17.26■□□□□ 0.35
PDGFRB-202ENST00000517488 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.26■□□□□ 0.35
PDGFRB-202ENST00000517488 KIF1BPQ96EK5 621 aa17.26■□□□□ 0.35
PDGFRB-202ENST00000517488 IDI2Q9BXS1 227 aa17.26■□□□□ 0.35
PDGFRB-202ENST00000517488 ELP3Q9H9T3 547 aa17.26■□□□□ 0.35
PDGFRB-202ENST00000517488 SAGE1Q9NXZ1 904 aa17.26■□□□□ 0.35
PDGFRB-202ENST00000517488 NDUFB9Q9Y6M9 179 aa17.26■□□□□ 0.35
PDGFRB-202ENST00000517488 RPAP1Q9BWH6 1393 aaPredicted RBP17.26■□□□□ 0.35
PDGFRB-202ENST00000517488 RAB11FIP3O75154 756 aa17.25■□□□□ 0.35
PDGFRB-202ENST00000517488 WDHD1O75717 1129 aaPredicted RBP17.25■□□□□ 0.35
PDGFRB-202ENST00000517488 LDHCP07864 332 aa17.25■□□□□ 0.35
PDGFRB-202ENST00000517488 TM4SF4P48230 202 aa17.25■□□□□ 0.35
PDGFRB-202ENST00000517488 RHBDL3P58872 404 aa17.25■□□□□ 0.35
PDGFRB-202ENST00000517488 GSTO1P78417 241 aa17.25■□□□□ 0.35
PDGFRB-202ENST00000517488 VGLL4Q14135 290 aa17.25■□□□□ 0.35
PDGFRB-202ENST00000517488 CLASRPQ8N2M8 674 aaKnown RBP17.25■□□□□ 0.35
PDGFRB-202ENST00000517488 CNKSR2Q8WXI2 1034 aa17.25■□□□□ 0.35
PDGFRB-202ENST00000517488 BCL11AQ9H165 835 aa17.25■□□□□ 0.35
PDGFRB-202ENST00000517488 DDX4Q9NQI0 724 aaKnown RBP17.25■□□□□ 0.35
PDGFRB-202ENST00000517488 RFX7Q2KHR2 1363 aa17.25■□□□□ 0.35
PDGFRB-202ENST00000517488 ENTPD3O75355 529 aa17.24■□□□□ 0.35
PDGFRB-202ENST00000517488 ZBTB48P10074 688 aaPredicted RBP17.24■□□□□ 0.35
PDGFRB-202ENST00000517488 SH3BP5LQ7L8J4 393 aa17.24■□□□□ 0.35
PDGFRB-202ENST00000517488 WRNIP1Q96S55 665 aa17.24■□□□□ 0.35
PDGFRB-202ENST00000517488 SREBF2Q12772 1141 aa17.23■□□□□ 0.35
PDGFRB-202ENST00000517488 PICALMQ13492 652 aa17.23■□□□□ 0.35
PDGFRB-202ENST00000517488 DCAF15Q66K64 600 aa17.23■□□□□ 0.35
PDGFRB-202ENST00000517488 NAA16Q6N069 864 aaPredicted RBP17.23■□□□□ 0.35
PDGFRB-202ENST00000517488 ZKSCAN4Q969J2 545 aaPredicted RBP17.23■□□□□ 0.35
PDGFRB-202ENST00000517488 OPTNQ96CV9 577 aa17.23■□□□□ 0.35
PDGFRB-202ENST00000517488 HOOK2Q96ED9 719 aa17.23■□□□□ 0.35
PDGFRB-202ENST00000517488 ZNF341Q9BYN7 854 aa17.23■□□□□ 0.35
PDGFRB-202ENST00000517488 CSADQ9Y600 493 aa17.23■□□□□ 0.35
PDGFRB-202ENST00000517488 SNCAIPQ9Y6H5 919 aa17.23■□□□□ 0.35
PDGFRB-202ENST00000517488 MANSC4A6NHS7 340 aaPredicted RBP17.22■□□□□ 0.35
PDGFRB-202ENST00000517488 IFIT2P09913 472 aaKnown RBP17.22■□□□□ 0.35
PDGFRB-202ENST00000517488 ADGRA1Q86SQ6 560 aa17.22■□□□□ 0.35
PDGFRB-202ENST00000517488 ANTXR1Q9H6X2 564 aa17.22■□□□□ 0.35
PDGFRB-202ENST00000517488 ATRNL1Q5VV63 1379 aa17.21■□□□□ 0.35
PDGFRB-202ENST00000517488 DDTLA6NHG4 134 aaPredicted RBP17.21■□□□□ 0.35
PDGFRB-202ENST00000517488 TBC1D8O95759 1140 aa17.21■□□□□ 0.35
PDGFRB-202ENST00000517488 SLURP2P0DP57 97 aa17.21■□□□□ 0.35
PDGFRB-202ENST00000517488 INPP5BP32019 993 aa17.21■□□□□ 0.35
PDGFRB-202ENST00000517488 ZSCAN29Q8IWY8 852 aaPredicted RBP17.21■□□□□ 0.35
PDGFRB-202ENST00000517488 PCDHB15Q9Y5E8 787 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms