RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 SIL1Q9H173 461 aa10.42□□□□□ -0.74
SCARNA20.3-201ENST00000516913 LAMA2P24043 3122 aaKnown RBP10.42□□□□□ -0.74
SCARNA20.3-201ENST00000516913 TCP10Q12799 353 aa10.41□□□□□ -0.74
SCARNA20.3-201ENST00000516913 RRP1BQ14684 758 aaKnown RBP10.41□□□□□ -0.74
SCARNA20.3-201ENST00000516913 MTFR1Q15390 333 aa10.41□□□□□ -0.74
SCARNA20.3-201ENST00000516913 TAF1CQ15572 869 aaPredicted RBP10.41□□□□□ -0.74
SCARNA20.3-201ENST00000516913 FKBP1CQ5VVH2 108 aa10.41□□□□□ -0.74
SCARNA20.3-201ENST00000516913 CCDC84Q86UT8 332 aaPredicted RBP10.41□□□□□ -0.74
SCARNA20.3-201ENST00000516913 FAM83AQ86UY5 434 aa10.41□□□□□ -0.74
SCARNA20.3-201ENST00000516913 TEKT1Q969V4 418 aa10.41□□□□□ -0.74
SCARNA20.3-201ENST00000516913 TRIM47Q96LD4 638 aa10.41□□□□□ -0.74
SCARNA20.3-201ENST00000516913 WRNIP1Q96S55 665 aa10.41□□□□□ -0.74
SCARNA20.3-201ENST00000516913 MEIS3Q99687 375 aa10.41□□□□□ -0.74
SCARNA20.3-201ENST00000516913 DDX4Q9NQI0 724 aaKnown RBP10.41□□□□□ -0.74
SCARNA20.3-201ENST00000516913 ARAP2Q8WZ64 1704 aa10.41□□□□□ -0.74
SCARNA20.3-201ENST00000516913 RFX7Q2KHR2 1363 aa10.4□□□□□ -0.74
SCARNA20.3-201ENST00000516913 TLR2O60603 784 aa10.4□□□□□ -0.74
SCARNA20.3-201ENST00000516913 GTF2A2P52657 109 aa10.4□□□□□ -0.74
SCARNA20.3-201ENST00000516913 TIMM10P62072 90 aa10.4□□□□□ -0.74
SCARNA20.3-201ENST00000516913 PUM3Q15397 648 aaKnown RBP10.4□□□□□ -0.74
SCARNA20.3-201ENST00000516913 HABP4Q5JVS0 413 aaKnown RBP10.4□□□□□ -0.74
SCARNA20.3-201ENST00000516913 PI16Q6UXB8 463 aa10.4□□□□□ -0.74
SCARNA20.3-201ENST00000516913 ERO1BQ86YB8 467 aa10.4□□□□□ -0.74
SCARNA20.3-201ENST00000516913 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.4□□□□□ -0.74
SCARNA20.3-201ENST00000516913 ERO1AQ96HE7 468 aa10.4□□□□□ -0.74
SCARNA20.3-201ENST00000516913 CPA4Q9UI42 421 aa10.4□□□□□ -0.74
SCARNA20.3-201ENST00000516913 NOB1Q9ULX3 412 aaKnown RBP10.4□□□□□ -0.74
SCARNA20.3-201ENST00000516913 KCNH4Q9UQ05 1017 aa10.4□□□□□ -0.74
SCARNA20.3-201ENST00000516913 LRRFIP2Q9Y608 721 aaKnown RBP10.4□□□□□ -0.74
SCARNA20.3-201ENST00000516913 PTPRCP08575 1304 aa10.39□□□□□ -0.75
SCARNA20.3-201ENST00000516913 KIF16BQ96L93 1317 aa10.39□□□□□ -0.75
SCARNA20.3-201ENST00000516913 DDTLA6NHG4 134 aaPredicted RBP10.39□□□□□ -0.75
SCARNA20.3-201ENST00000516913 E9PSI1 815 aa10.39□□□□□ -0.75
SCARNA20.3-201ENST00000516913 WDHD1O75717 1129 aaPredicted RBP10.39□□□□□ -0.75
SCARNA20.3-201ENST00000516913 LACTBP83111 547 aaPredicted RBP10.39□□□□□ -0.75
SCARNA20.3-201ENST00000516913 PPIL2Q13356 520 aa10.39□□□□□ -0.75
SCARNA20.3-201ENST00000516913 TNFAIP1Q13829 316 aa10.39□□□□□ -0.75
SCARNA20.3-201ENST00000516913 UBE2Q1Q7Z7E8 422 aa10.39□□□□□ -0.75
SCARNA20.3-201ENST00000516913 FAM151AQ8WW52 585 aa10.39□□□□□ -0.75
SCARNA20.3-201ENST00000516913 LPIN2Q92539 896 aa10.39□□□□□ -0.75
SCARNA20.3-201ENST00000516913 PCDH10Q9P2E7 1040 aa10.39□□□□□ -0.75
SCARNA20.3-201ENST00000516913 CYP2C8P10632 490 aa10.38□□□□□ -0.75
SCARNA20.3-201ENST00000516913 JAG1P78504 1218 aa10.38□□□□□ -0.75
SCARNA20.3-201ENST00000516913 MAP3K10Q02779 954 aa10.38□□□□□ -0.75
SCARNA20.3-201ENST00000516913 RASGRF1Q13972 1273 aa10.38□□□□□ -0.75
SCARNA20.3-201ENST00000516913 CAVIN4Q5BKX8 364 aa10.38□□□□□ -0.75
SCARNA20.3-201ENST00000516913 VPS37DQ86XT2 251 aa10.38□□□□□ -0.75
SCARNA20.3-201ENST00000516913 TBC1D22AQ8WUA7 517 aa10.38□□□□□ -0.75
SCARNA20.3-201ENST00000516913 ZFYVE28Q9HCC9 887 aa10.38□□□□□ -0.75
SCARNA20.3-201ENST00000516913 GAKO14976 1311 aa10.37□□□□□ -0.75
SCARNA20.3-201ENST00000516913 FAM196BA6NMK8 535 aa10.37□□□□□ -0.75
SCARNA20.3-201ENST00000516913 BCRP11274 1271 aa10.37□□□□□ -0.75
SCARNA20.3-201ENST00000516913 RGS3P49796 1198 aa10.37□□□□□ -0.75
SCARNA20.3-201ENST00000516913 FXR1P51114 621 aaKnown RBP eCLIP10.37□□□□□ -0.75
SCARNA20.3-201ENST00000516913 RHBDL3P58872 404 aa10.37□□□□□ -0.75
SCARNA20.3-201ENST00000516913 ATP2B3Q16720 1220 aa10.37□□□□□ -0.75
SCARNA20.3-201ENST00000516913 SHROOM1Q2M3G4 852 aaPredicted RBP10.37□□□□□ -0.75
SCARNA20.3-201ENST00000516913 ALDH1L2Q3SY69 923 aa10.37□□□□□ -0.75
SCARNA20.3-201ENST00000516913 CCDC102BQ68D86 513 aa10.37□□□□□ -0.75
SCARNA20.3-201ENST00000516913 INTS3Q68E01 1043 aaKnown RBP10.37□□□□□ -0.75
SCARNA20.3-201ENST00000516913 DNAH12Q6ZR08 3092 aa10.37□□□□□ -0.75
SCARNA20.3-201ENST00000516913 COPRSQ9NQ92 184 aa10.37□□□□□ -0.75
SCARNA20.3-201ENST00000516913 USP40Q9NVE5 1235 aa10.37□□□□□ -0.75
SCARNA20.3-201ENST00000516913 GABRQQ9UN88 632 aa10.37□□□□□ -0.75
SCARNA20.3-201ENST00000516913 COLQQ9Y215 455 aaPredicted RBP10.37□□□□□ -0.75
SCARNA20.3-201ENST00000516913 SUGT1Q9Y2Z0 365 aa10.37□□□□□ -0.75
SCARNA20.3-201ENST00000516913 CSADQ9Y600 493 aa10.37□□□□□ -0.75
SCARNA20.3-201ENST00000516913 RPAP1Q9BWH6 1393 aaPredicted RBP10.37□□□□□ -0.75
SCARNA20.3-201ENST00000516913 CUL9Q8IWT3 2517 aa10.36□□□□□ -0.75
SCARNA20.3-201ENST00000516913 H0YGN5 161 aa10.36□□□□□ -0.75
SCARNA20.3-201ENST00000516913 PDHXO00330 501 aa10.36□□□□□ -0.75
SCARNA20.3-201ENST00000516913 PEX10O60683 326 aa10.36□□□□□ -0.75
SCARNA20.3-201ENST00000516913 FRAT2O75474 233 aaPredicted RBP10.36□□□□□ -0.75
SCARNA20.3-201ENST00000516913 CIAO1O76071 339 aa10.36□□□□□ -0.75
SCARNA20.3-201ENST00000516913 IFIT1P09914 478 aaKnown RBP10.36□□□□□ -0.75
SCARNA20.3-201ENST00000516913 CETPP11597 493 aa10.36□□□□□ -0.75
SCARNA20.3-201ENST00000516913 OSBPP22059 807 aa10.36□□□□□ -0.75
SCARNA20.3-201ENST00000516913 TNNI2P48788 182 aa10.36□□□□□ -0.75
SCARNA20.3-201ENST00000516913 RARSP54136 660 aaKnown RBP10.36□□□□□ -0.75
SCARNA20.3-201ENST00000516913 PPATQ06203 517 aa10.36□□□□□ -0.75
SCARNA20.3-201ENST00000516913 TFCP2Q12800 502 aa10.36□□□□□ -0.75
SCARNA20.3-201ENST00000516913 SNAPC2Q13487 334 aa10.36□□□□□ -0.75
SCARNA20.3-201ENST00000516913 NOL9Q5SY16 702 aaKnown RBP10.36□□□□□ -0.75
SCARNA20.3-201ENST00000516913 OTUD7BQ6GQQ9 843 aa10.36□□□□□ -0.75
SCARNA20.3-201ENST00000516913 TBC1D9Q6ZT07 1266 aa10.36□□□□□ -0.75
SCARNA20.3-201ENST00000516913 ZNF341Q9BYN7 854 aa10.36□□□□□ -0.75
SCARNA20.3-201ENST00000516913 SMC4Q9NTJ3 1288 aa10.36□□□□□ -0.75
SCARNA20.3-201ENST00000516913 SALL1Q9NSC2 1324 aa10.35□□□□□ -0.75
SCARNA20.3-201ENST00000516913 SLC5A1P13866 664 aa10.35□□□□□ -0.75
SCARNA20.3-201ENST00000516913 PSMC4P43686 418 aa10.35□□□□□ -0.75
SCARNA20.3-201ENST00000516913 POTEEQ6S8J3 1075 aa10.35□□□□□ -0.75
SCARNA20.3-201ENST00000516913 ANKRD23Q86SG2 305 aa10.35□□□□□ -0.75
SCARNA20.3-201ENST00000516913 WDR66Q8TBY9 1149 aa10.35□□□□□ -0.75
SCARNA20.3-201ENST00000516913 IDI2Q9BXS1 227 aa10.35□□□□□ -0.75
SCARNA20.3-201ENST00000516913 SRRDQ9UH36 339 aa10.35□□□□□ -0.75
SCARNA20.3-201ENST00000516913 AFG3L2Q9Y4W6 797 aa10.35□□□□□ -0.75
SCARNA20.3-201ENST00000516913 PNMA6EA0A0J9YXQ4 647 aa10.34□□□□□ -0.75
SCARNA20.3-201ENST00000516913 ZBTB22O15209 634 aa10.34□□□□□ -0.75
SCARNA20.3-201ENST00000516913 BCAR3O75815 825 aa10.34□□□□□ -0.75
SCARNA20.3-201ENST00000516913 PTPRAP18433 802 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms