RNA–Protein interactions for RNA: ENST00000515824.1

LMNA-225, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-225ENST00000515824 AIDAQ96BJ3 306 aa23.72■■□□□ 1.39
LMNA-225ENST00000515824 USP40Q9NVE5 1235 aa23.72■■□□□ 1.39
LMNA-225ENST00000515824 WBP1LQ9NX94 342 aa23.72■■□□□ 1.39
LMNA-225ENST00000515824 RAI14Q9P0K7 980 aa23.72■■□□□ 1.39
LMNA-225ENST00000515824 GAKO14976 1311 aa23.71■■□□□ 1.39
LMNA-225ENST00000515824 IFIT2P09913 472 aaKnown RBP23.71■■□□□ 1.39
LMNA-225ENST00000515824 CRBNQ96SW2 442 aa23.71■■□□□ 1.39
LMNA-225ENST00000515824 TMEM39BQ9GZU3 492 aa23.71■■□□□ 1.39
LMNA-225ENST00000515824 FAM155AB1AL88 458 aaPredicted RBP23.7■■□□□ 1.38
LMNA-225ENST00000515824 MAP3K11Q16584 847 aa23.7■■□□□ 1.38
LMNA-225ENST00000515824 NSUN4Q96CB9 384 aaKnown RBP23.7■■□□□ 1.38
LMNA-225ENST00000515824 TEPSINQ96N21 525 aa23.7■■□□□ 1.38
LMNA-225ENST00000515824 BEGAINQ9BUH8 593 aa23.7■■□□□ 1.38
LMNA-225ENST00000515824 BCL11AQ9H165 835 aa23.7■■□□□ 1.38
LMNA-225ENST00000515824 IGSF3O75054 1194 aa23.69■■□□□ 1.38
LMNA-225ENST00000515824 CYP2E1P05181 493 aaPredicted RBP23.69■■□□□ 1.38
LMNA-225ENST00000515824 SLC10A3P09131 477 aa23.69■■□□□ 1.38
LMNA-225ENST00000515824 ZAP70P43403 619 aa23.69■■□□□ 1.38
LMNA-225ENST00000515824 LDLRAD1Q5T700 205 aa23.69■■□□□ 1.38
LMNA-225ENST00000515824 LRRCC1Q9C099 1032 aa23.69■■□□□ 1.38
LMNA-225ENST00000515824 MROH7-TTC4A0A0A0MT08 1334 aa23.68■■□□□ 1.38
LMNA-225ENST00000515824 IREB2P48200 963 aaKnown RBP23.68■■□□□ 1.38
LMNA-225ENST00000515824 RASAL3Q86YV0 1011 aa23.68■■□□□ 1.38
LMNA-225ENST00000515824 FAM151AQ8WW52 585 aa23.68■■□□□ 1.38
LMNA-225ENST00000515824 HOOK2Q96ED9 719 aa23.68■■□□□ 1.38
LMNA-225ENST00000515824 DCTPP1Q9H773 170 aa23.68■■□□□ 1.38
LMNA-225ENST00000515824 FZD1Q9UP38 647 aa23.68■■□□□ 1.38
LMNA-225ENST00000515824 GPR75-ASB3A0A0A6YYF3 556 aa23.67■■□□□ 1.38
LMNA-225ENST00000515824 UNCXA6NJT0 531 aa23.67■■□□□ 1.38
LMNA-225ENST00000515824 USP2O75604 605 aaPredicted RBP23.67■■□□□ 1.38
LMNA-225ENST00000515824 BTDP43251 543 aa23.67■■□□□ 1.38
LMNA-225ENST00000515824 PCDHB15Q9Y5E8 787 aa23.67■■□□□ 1.38
LMNA-225ENST00000515824 KIF23Q02241 960 aaPredicted RBP23.66■■□□□ 1.38
LMNA-225ENST00000515824 TCP10Q12799 353 aa23.66■■□□□ 1.38
LMNA-225ENST00000515824 NAA16Q6N069 864 aaPredicted RBP23.66■■□□□ 1.38
LMNA-225ENST00000515824 CDAN1Q8IWY9 1227 aa23.66■■□□□ 1.38
LMNA-225ENST00000515824 ZNF384Q8TF68 577 aa23.66■■□□□ 1.38
LMNA-225ENST00000515824 SSC5DA1L4H1 1573 aa23.65■■□□□ 1.38
LMNA-225ENST00000515824 NFIAQ12857 509 aa23.65■■□□□ 1.38
LMNA-225ENST00000515824 SLC10A4Q96EP9 437 aa23.65■■□□□ 1.38
LMNA-225ENST00000515824 ZIC5Q96T25 663 aa23.65■■□□□ 1.38
LMNA-225ENST00000515824 NOL10Q9BSC4 688 aaKnown RBP23.65■■□□□ 1.38
LMNA-225ENST00000515824 IDI2Q9BXS1 227 aa23.65■■□□□ 1.38
LMNA-225ENST00000515824 FOXN1O15353 648 aa23.64■■□□□ 1.37
LMNA-225ENST00000515824 MAP4K4O95819 1239 aaPredicted RBP23.64■■□□□ 1.37
LMNA-225ENST00000515824 REM2Q8IYK8 340 aaPredicted RBP23.64■■□□□ 1.37
LMNA-225ENST00000515824 ANKRD13AQ8IZ07 590 aa23.64■■□□□ 1.37
LMNA-225ENST00000515824 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.64■■□□□ 1.37
LMNA-225ENST00000515824 FAM198AQ9UFP1 575 aa23.64■■□□□ 1.37
LMNA-225ENST00000515824 MYH2Q9UKX2 1941 aa23.63■■□□□ 1.37
LMNA-225ENST00000515824 ENTPD3O75355 529 aa23.63■■□□□ 1.37
LMNA-225ENST00000515824 CTCFP49711 727 aaPredicted RBP23.63■■□□□ 1.37
LMNA-225ENST00000515824 AAMPQ13685 434 aa23.63■■□□□ 1.37
LMNA-225ENST00000515824 PIH1D3Q9NQM4 214 aaKnown RBP23.63■■□□□ 1.37
LMNA-225ENST00000515824 RPAP1Q9BWH6 1393 aaPredicted RBP23.63■■□□□ 1.37
LMNA-225ENST00000515824 THSD7BQ9C0I4 1608 aa23.62■■□□□ 1.37
LMNA-225ENST00000515824 IDH1O75874 414 aaKnown RBP23.62■■□□□ 1.37
LMNA-225ENST00000515824 BAG3O95817 575 aa23.62■■□□□ 1.37
LMNA-225ENST00000515824 RGS3P49796 1198 aa23.62■■□□□ 1.37
LMNA-225ENST00000515824 TTF1Q15361 905 aaPredicted RBP23.62■■□□□ 1.37
LMNA-225ENST00000515824 DCAF15Q66K64 600 aa23.62■■□□□ 1.37
LMNA-225ENST00000515824 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.62■■□□□ 1.37
LMNA-225ENST00000515824 NDUFB9Q9Y6M9 179 aa23.62■■□□□ 1.37
LMNA-225ENST00000515824 AKAP11Q9UKA4 1901 aa23.61■■□□□ 1.37
LMNA-225ENST00000515824 CA12O43570 354 aa23.61■■□□□ 1.37
LMNA-225ENST00000515824 SMARCA5O60264 1052 aaPredicted RBP23.61■■□□□ 1.37
LMNA-225ENST00000515824 RHBDL3P58872 404 aa23.61■■□□□ 1.37
LMNA-225ENST00000515824 MAP3K9P80192 1104 aa23.61■■□□□ 1.37
LMNA-225ENST00000515824 MAP3K12Q12852 859 aa23.61■■□□□ 1.37
LMNA-225ENST00000515824 SUPT16HQ9Y5B9 1047 aaKnown RBP23.61■■□□□ 1.37
LMNA-225ENST00000515824 WDHD1O75717 1129 aaPredicted RBP23.6■■□□□ 1.37
LMNA-225ENST00000515824 CLMNQ96JQ2 1002 aa23.6■■□□□ 1.37
LMNA-225ENST00000515824 CSRNP1Q96S65 589 aa23.6■■□□□ 1.37
LMNA-225ENST00000515824 ANTXR1Q9H6X2 564 aa23.6■■□□□ 1.37
LMNA-225ENST00000515824 NPM3O75607 178 aaKnown RBP23.59■■□□□ 1.37
LMNA-225ENST00000515824 ATP5JP18859 108 aa23.59■■□□□ 1.37
LMNA-225ENST00000515824 CYP7A1P22680 504 aa23.59■■□□□ 1.37
LMNA-225ENST00000515824 MKRN3Q13064 507 aaKnown RBP23.59■■□□□ 1.37
LMNA-225ENST00000515824 PICALMQ13492 652 aa23.59■■□□□ 1.37
LMNA-225ENST00000515824 SPRYD7Q5W111 196 aa23.59■■□□□ 1.37
LMNA-225ENST00000515824 TMED8Q6PL24 325 aaPredicted RBP23.59■■□□□ 1.37
LMNA-225ENST00000515824 MIGA2Q7L4E1 593 aa23.59■■□□□ 1.37
LMNA-225ENST00000515824 ZSCAN29Q8IWY8 852 aaPredicted RBP23.59■■□□□ 1.37
LMNA-225ENST00000515824 ZFPM1Q8IX07 1006 aa23.59■■□□□ 1.37
LMNA-225ENST00000515824 AATFQ9NY61 560 aaKnown RBP eCLIP23.59■■□□□ 1.37
LMNA-225ENST00000515824 PLCG2P16885 1265 aa23.58■■□□□ 1.37
LMNA-225ENST00000515824 PPP4CP60510 307 aa23.58■■□□□ 1.37
LMNA-225ENST00000515824 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.58■■□□□ 1.37
LMNA-225ENST00000515824 DNAJC2Q99543 621 aaKnown RBP23.58■■□□□ 1.37
LMNA-225ENST00000515824 ZNF341Q9BYN7 854 aa23.58■■□□□ 1.37
LMNA-225ENST00000515824 CSADQ9Y600 493 aa23.58■■□□□ 1.37
LMNA-225ENST00000515824 ZBTB48P10074 688 aaPredicted RBP23.57■■□□□ 1.36
LMNA-225ENST00000515824 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.57■■□□□ 1.36
LMNA-225ENST00000515824 TEX11Q8IYF3 940 aa23.57■■□□□ 1.36
LMNA-225ENST00000515824 MAGEB6Q8N7X4 407 aa23.57■■□□□ 1.36
LMNA-225ENST00000515824 WNK4Q96J92 1243 aa23.57■■□□□ 1.36
LMNA-225ENST00000515824 BOLA2Q9H3K6 86 aa23.57■■□□□ 1.36
LMNA-225ENST00000515824 DDX4Q9NQI0 724 aaKnown RBP23.57■■□□□ 1.36
LMNA-225ENST00000515824 GOLIM4O00461 696 aa23.56■■□□□ 1.36
LMNA-225ENST00000515824 HSPA8P11142 646 aaKnown RBP23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms