RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 TMEM57Q8N5G2 664 aa21.64■■□□□ 1.05
DDX41-217ENST00000515562 IGF2BP3O00425 579 aaKnown RBP eCLIP21.63■■□□□ 1.05
DDX41-217ENST00000515562 FKTNO75072 461 aa21.63■■□□□ 1.05
DDX41-217ENST00000515562 TIMM10P62072 90 aa21.63■■□□□ 1.05
DDX41-217ENST00000515562 RASGRF1Q13972 1273 aa21.63■■□□□ 1.05
DDX41-217ENST00000515562 FTSJ3Q8IY81 847 aaKnown RBP21.63■■□□□ 1.05
DDX41-217ENST00000515562 TESPA1A2RU30 521 aaPredicted RBP21.62■■□□□ 1.05
DDX41-217ENST00000515562 XAGE2Q96GT9 111 aa21.62■■□□□ 1.05
DDX41-217ENST00000515562 PNMA6EA0A0J9YXQ4 647 aa21.61■■□□□ 1.05
DDX41-217ENST00000515562 RGS19P49795 217 aa21.61■■□□□ 1.05
DDX41-217ENST00000515562 CDC42EP5Q6NZY7 148 aa21.61■■□□□ 1.05
DDX41-217ENST00000515562 DZIP1Q86YF9 867 aaKnown RBP21.61■■□□□ 1.05
DDX41-217ENST00000515562 FAM151AQ8WW52 585 aa21.61■■□□□ 1.05
DDX41-217ENST00000515562 WRNIP1Q96S55 665 aa21.61■■□□□ 1.05
DDX41-217ENST00000515562 SPDYE5A6NIY4 337 aa21.6■■□□□ 1.05
DDX41-217ENST00000515562 G3BP1Q13283 466 aaKnown RBP eCLIP21.6■■□□□ 1.05
DDX41-217ENST00000515562 SPTY2D1Q68D10 685 aaPredicted RBP21.6■■□□□ 1.05
DDX41-217ENST00000515562 SLF2Q8IX21 1173 aa21.6■■□□□ 1.05
DDX41-217ENST00000515562 R3HDMLQ9H3Y0 253 aa21.6■■□□□ 1.05
DDX41-217ENST00000515562 MYH2Q9UKX2 1941 aa21.6■■□□□ 1.05
DDX41-217ENST00000515562 GTF2A2P52657 109 aa21.59■■□□□ 1.05
DDX41-217ENST00000515562 OTUD5Q96G74 571 aa21.59■■□□□ 1.05
DDX41-217ENST00000515562 NEUROD6Q96NK8 337 aa21.59■■□□□ 1.05
DDX41-217ENST00000515562 ZNF341Q9BYN7 854 aa21.59■■□□□ 1.05
DDX41-217ENST00000515562 ABCF2Q9UG63 623 aa21.59■■□□□ 1.05
DDX41-217ENST00000515562 SNCAIPQ9Y6H5 919 aa21.59■■□□□ 1.05
DDX41-217ENST00000515562 GAKO14976 1311 aa21.58■■□□□ 1.05
DDX41-217ENST00000515562 MLLT1Q03111 559 aaPredicted RBP21.58■■□□□ 1.05
DDX41-217ENST00000515562 GORABQ5T7V8 394 aa21.58■■□□□ 1.05
DDX41-217ENST00000515562 CNKSR2Q8WXI2 1034 aa21.58■■□□□ 1.05
DDX41-217ENST00000515562 MS4A4AQ96JQ5 239 aa21.58■■□□□ 1.05
DDX41-217ENST00000515562 USP40Q9NVE5 1235 aa21.58■■□□□ 1.05
DDX41-217ENST00000515562 TCP10Q12799 353 aa21.57■■□□□ 1.04
DDX41-217ENST00000515562 NFIAQ12857 509 aa21.57■■□□□ 1.04
DDX41-217ENST00000515562 CRHR2Q13324 411 aa21.57■■□□□ 1.04
DDX41-217ENST00000515562 ERO1BQ86YB8 467 aa21.57■■□□□ 1.04
DDX41-217ENST00000515562 ITPRIPQ8IWB1 547 aa21.57■■□□□ 1.04
DDX41-217ENST00000515562 PTPN18Q99952 460 aa21.57■■□□□ 1.04
DDX41-217ENST00000515562 HPS5Q9UPZ3 1129 aa21.57■■□□□ 1.04
DDX41-217ENST00000515562 DOCK2Q92608 1830 aa21.57■■□□□ 1.04
DDX41-217ENST00000515562 CCL15-CCL14A0A0B4J2E2 113 aa21.56■■□□□ 1.04
DDX41-217ENST00000515562 POLA2Q14181 598 aa21.56■■□□□ 1.04
DDX41-217ENST00000515562 CCL15Q16663 113 aa21.56■■□□□ 1.04
DDX41-217ENST00000515562 FBXO46Q6PJ61 603 aaPredicted RBP21.56■■□□□ 1.04
DDX41-217ENST00000515562 SSH3Q8TE77 659 aa21.56■■□□□ 1.04
DDX41-217ENST00000515562 BRI3BPQ8WY22 251 aa21.56■■□□□ 1.04
DDX41-217ENST00000515562 ZKSCAN4Q969J2 545 aaPredicted RBP21.56■■□□□ 1.04
DDX41-217ENST00000515562 FAM163AQ96GL9 167 aaPredicted RBP21.56■■□□□ 1.04
DDX41-217ENST00000515562 FAM198AQ9UFP1 575 aa21.56■■□□□ 1.04
DDX41-217ENST00000515562 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.56■■□□□ 1.04
DDX41-217ENST00000515562 RFX7Q2KHR2 1363 aa21.56■■□□□ 1.04
DDX41-217ENST00000515562 AK9Q5TCS8 1911 aa21.55■■□□□ 1.04
DDX41-217ENST00000515562 ARID4AP29374 1257 aaPredicted RBP21.55■■□□□ 1.04
DDX41-217ENST00000515562 ERICH6Q7L0X2 663 aa21.55■■□□□ 1.04
DDX41-217ENST00000515562 MIGA2Q7L4E1 593 aa21.55■■□□□ 1.04
DDX41-217ENST00000515562 SPATA5Q8NB90 893 aa21.55■■□□□ 1.04
DDX41-217ENST00000515562 IDI2Q9BXS1 227 aa21.55■■□□□ 1.04
DDX41-217ENST00000515562 MROH7-TTC4A0A0A0MT08 1334 aa21.55■■□□□ 1.04
DDX41-217ENST00000515562 ENTPD3O75355 529 aa21.54■■□□□ 1.04
DDX41-217ENST00000515562 CETPP11597 493 aa21.54■■□□□ 1.04
DDX41-217ENST00000515562 PPIL2Q13356 520 aa21.54■■□□□ 1.04
DDX41-217ENST00000515562 ERO1AQ96HE7 468 aa21.54■■□□□ 1.04
DDX41-217ENST00000515562 GPR108Q9NPR9 543 aa21.54■■□□□ 1.04
DDX41-217ENST00000515562 HMG20BQ9P0W2 317 aa21.54■■□□□ 1.04
DDX41-217ENST00000515562 WDHD1O75717 1129 aaPredicted RBP21.53■■□□□ 1.04
DDX41-217ENST00000515562 UQCRFS1P1P0C7P4 283 aa21.53■■□□□ 1.04
DDX41-217ENST00000515562 RLBP1P12271 317 aa21.53■■□□□ 1.04
DDX41-217ENST00000515562 ATP8B2P98198 1209 aa21.53■■□□□ 1.04
DDX41-217ENST00000515562 OS9Q13438 667 aaPredicted RBP21.53■■□□□ 1.04
DDX41-217ENST00000515562 SNAPC2Q13487 334 aa21.53■■□□□ 1.04
DDX41-217ENST00000515562 ZCCHC17Q9NP64 241 aaKnown RBP21.53■■□□□ 1.04
DDX41-217ENST00000515562 ZNF112Q9UJU3 913 aa21.53■■□□□ 1.04
DDX41-217ENST00000515562 IRF6O14896 467 aa21.52■■□□□ 1.04
DDX41-217ENST00000515562 ZBTB7BO15156 539 aaPredicted RBP21.52■■□□□ 1.04
DDX41-217ENST00000515562 BTDP43251 543 aa21.52■■□□□ 1.04
DDX41-217ENST00000515562 RGS3P49796 1198 aa21.52■■□□□ 1.04
DDX41-217ENST00000515562 GSTO1P78417 241 aa21.52■■□□□ 1.04
DDX41-217ENST00000515562 MECOMQ03112 1051 aa21.52■■□□□ 1.04
DDX41-217ENST00000515562 PPATQ06203 517 aa21.52■■□□□ 1.04
DDX41-217ENST00000515562 TAF1CQ15572 869 aaPredicted RBP21.52■■□□□ 1.04
DDX41-217ENST00000515562 C1orf115Q9H7X2 142 aa21.52■■□□□ 1.04
DDX41-217ENST00000515562 ATRNL1Q5VV63 1379 aa21.51■■□□□ 1.03
DDX41-217ENST00000515562 INPP5BP32019 993 aa21.51■■□□□ 1.03
DDX41-217ENST00000515562 SOX10P56693 466 aa21.51■■□□□ 1.03
DDX41-217ENST00000515562 NOL9Q5SY16 702 aaKnown RBP21.51■■□□□ 1.03
DDX41-217ENST00000515562 PI16Q6UXB8 463 aa21.51■■□□□ 1.03
DDX41-217ENST00000515562 OTOP1Q7RTM1 612 aa21.51■■□□□ 1.03
DDX41-217ENST00000515562 ZFYVE28Q9HCC9 887 aa21.51■■□□□ 1.03
DDX41-217ENST00000515562 TRIM17Q9Y577 477 aa21.51■■□□□ 1.03
DDX41-217ENST00000515562 MAST2Q6P0Q8 1798 aa21.51■■□□□ 1.03
DDX41-217ENST00000515562 GPR75-ASB3A0A0A6YYF3 556 aa21.5■■□□□ 1.03
DDX41-217ENST00000515562 SURF6O75683 361 aaKnown RBP21.5■■□□□ 1.03
DDX41-217ENST00000515562 MCAMP43121 646 aa21.5■■□□□ 1.03
DDX41-217ENST00000515562 SP3Q02447 781 aa21.5■■□□□ 1.03
DDX41-217ENST00000515562 TNNI3KQ59H18 835 aa21.5■■□□□ 1.03
DDX41-217ENST00000515562 FAM43AQ8N2R8 423 aa21.5■■□□□ 1.03
DDX41-217ENST00000515562 FPGT-TNNI3KV9GXZ4 949 aa21.5■■□□□ 1.03
DDX41-217ENST00000515562 MAP4K4O95819 1239 aaPredicted RBP21.49■■□□□ 1.03
DDX41-217ENST00000515562 LDHCP07864 332 aa21.49■■□□□ 1.03
DDX41-217ENST00000515562 ZSCAN29Q8IWY8 852 aaPredicted RBP21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms