RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 IFIT1P09914 478 aaKnown RBP19.78■□□□□ 0.76
LMNA-223ENST00000515459 AK9Q5TCS8 1911 aa19.77■□□□□ 0.76
LMNA-223ENST00000515459 PUM3Q15397 648 aaKnown RBP19.77■□□□□ 0.76
LMNA-223ENST00000515459 C17orf99Q6UX52 265 aa19.77■□□□□ 0.76
LMNA-223ENST00000515459 MIGA2Q7L4E1 593 aa19.77■□□□□ 0.76
LMNA-223ENST00000515459 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.77■□□□□ 0.76
LMNA-223ENST00000515459 KLHDC4Q8TBB5 520 aa19.77■□□□□ 0.76
LMNA-223ENST00000515459 ANP32CO43423 234 aa19.76■□□□□ 0.75
LMNA-223ENST00000515459 INPP5BP32019 993 aa19.76■□□□□ 0.75
LMNA-223ENST00000515459 ANKRD23Q86SG2 305 aa19.76■□□□□ 0.75
LMNA-223ENST00000515459 FAM151AQ8WW52 585 aa19.76■□□□□ 0.75
LMNA-223ENST00000515459 FGFR2P21802 821 aa19.75■□□□□ 0.75
LMNA-223ENST00000515459 WDR66Q8TBY9 1149 aa19.75■□□□□ 0.75
LMNA-223ENST00000515459 SRRDQ9UH36 339 aa19.75■□□□□ 0.75
LMNA-223ENST00000515459 CPA4Q9UI42 421 aa19.75■□□□□ 0.75
LMNA-223ENST00000515459 H0YGN5 161 aa19.74■□□□□ 0.75
LMNA-223ENST00000515459 PDHXO00330 501 aa19.74■□□□□ 0.75
LMNA-223ENST00000515459 ECM2O94769 699 aaPredicted RBP19.74■□□□□ 0.75
LMNA-223ENST00000515459 HOXD10P28358 340 aa19.74■□□□□ 0.75
LMNA-223ENST00000515459 PSMC4P43686 418 aa19.74■□□□□ 0.75
LMNA-223ENST00000515459 PTPRCP08575 1304 aa19.74■□□□□ 0.75
LMNA-223ENST00000515459 SLC5A1P13866 664 aa19.73■□□□□ 0.75
LMNA-223ENST00000515459 CTGFP29279 349 aa19.73■□□□□ 0.75
LMNA-223ENST00000515459 ZEB1P37275 1124 aaPredicted RBP19.73■□□□□ 0.75
LMNA-223ENST00000515459 MTFR1Q15390 333 aa19.73■□□□□ 0.75
LMNA-223ENST00000515459 MRPL50Q8N5N7 158 aaKnown RBP19.73■□□□□ 0.75
LMNA-223ENST00000515459 TRIM47Q96LD4 638 aa19.73■□□□□ 0.75
LMNA-223ENST00000515459 ZNF112Q9UJU3 913 aa19.73■□□□□ 0.75
LMNA-223ENST00000515459 KCNH4Q9UQ05 1017 aa19.73■□□□□ 0.75
LMNA-223ENST00000515459 FMNL1O95466 1100 aaPredicted RBP19.72■□□□□ 0.75
LMNA-223ENST00000515459 TCP10Q12799 353 aa19.72■□□□□ 0.75
LMNA-223ENST00000515459 NKX2-3Q8TAU0 364 aa19.72■□□□□ 0.75
LMNA-223ENST00000515459 RAET1EQ8TD07 263 aa19.72■□□□□ 0.75
LMNA-223ENST00000515459 LPIN2Q92539 896 aa19.72■□□□□ 0.75
LMNA-223ENST00000515459 USP44Q9H0E7 712 aa19.72■□□□□ 0.75
LMNA-223ENST00000515459 DAGLAQ9Y4D2 1042 aa19.72■□□□□ 0.75
LMNA-223ENST00000515459 ADGRA2Q96PE1 1338 aa19.72■□□□□ 0.75
LMNA-223ENST00000515459 EYA2O00167 538 aa19.71■□□□□ 0.75
LMNA-223ENST00000515459 OSBPP22059 807 aa19.71■□□□□ 0.75
LMNA-223ENST00000515459 GRK4P32298 578 aa19.71■□□□□ 0.75
LMNA-223ENST00000515459 CDC42EP5Q6NZY7 148 aa19.71■□□□□ 0.75
LMNA-223ENST00000515459 FAM9BQ8IZU0 186 aa19.71■□□□□ 0.75
LMNA-223ENST00000515459 SHISA4Q96DD7 197 aa19.71■□□□□ 0.75
LMNA-223ENST00000515459 MYPNQ86TC9 1320 aa19.71■□□□□ 0.75
LMNA-223ENST00000515459 DIXDC1Q155Q3 683 aa19.7■□□□□ 0.74
LMNA-223ENST00000515459 NOL9Q5SY16 702 aaKnown RBP19.7■□□□□ 0.74
LMNA-223ENST00000515459 DPF3Q92784 378 aa19.7■□□□□ 0.74
LMNA-223ENST00000515459 MGAMO43451 1857 aa19.7■□□□□ 0.74
LMNA-223ENST00000515459 CEP290O15078 2479 aa19.7■□□□□ 0.74
LMNA-223ENST00000515459 RFX5P48382 616 aaPredicted RBP19.69■□□□□ 0.74
LMNA-223ENST00000515459 NFIAQ12857 509 aa19.69■□□□□ 0.74
LMNA-223ENST00000515459 MOGSQ13724 837 aa19.69■□□□□ 0.74
LMNA-223ENST00000515459 PARK7Q99497 189 aaKnown RBP19.69■□□□□ 0.74
LMNA-223ENST00000515459 DOCK2Q92608 1830 aa19.68■□□□□ 0.74
LMNA-223ENST00000515459 LDHBP07195 334 aaKnown RBP19.68■□□□□ 0.74
LMNA-223ENST00000515459 PRDX5P30044 214 aa19.68■□□□□ 0.74
LMNA-223ENST00000515459 GJA8P48165 433 aa19.68■□□□□ 0.74
LMNA-223ENST00000515459 CHRDL2Q6WN34 429 aa19.68■□□□□ 0.74
LMNA-223ENST00000515459 GNL3LQ9NVN8 582 aaKnown RBP19.68■□□□□ 0.74
LMNA-223ENST00000515459 FAM198AQ9UFP1 575 aa19.68■□□□□ 0.74
LMNA-223ENST00000515459 CXCL11O14625 94 aa19.67■□□□□ 0.74
LMNA-223ENST00000515459 GJB1P08034 283 aa19.67■□□□□ 0.74
LMNA-223ENST00000515459 CCL5P13501 91 aa19.67■□□□□ 0.74
LMNA-223ENST00000515459 FCGRTP55899 365 aa19.67■□□□□ 0.74
LMNA-223ENST00000515459 UBXN2AP68543 259 aa19.67■□□□□ 0.74
LMNA-223ENST00000515459 ATG9AQ7Z3C6 839 aa19.67■□□□□ 0.74
LMNA-223ENST00000515459 USP40Q9NVE5 1235 aa19.67■□□□□ 0.74
LMNA-223ENST00000515459 BIN2Q9UBW5 565 aaPredicted RBP19.67■□□□□ 0.74
LMNA-223ENST00000515459 ZNF521Q96K83 1311 aa19.67■□□□□ 0.74
LMNA-223ENST00000515459 CYP2C8P10632 490 aa19.66■□□□□ 0.74
LMNA-223ENST00000515459 BCRP11274 1271 aa19.66■□□□□ 0.74
LMNA-223ENST00000515459 SSH1Q8WYL5 1049 aa19.66■□□□□ 0.74
LMNA-223ENST00000515459 HTATIP2Q9BUP3 242 aa19.66■□□□□ 0.74
LMNA-223ENST00000515459 RNF208Q9H0X6 261 aa19.66■□□□□ 0.74
LMNA-223ENST00000515459 TRIOBPQ9H2D6 2365 aa19.66■□□□□ 0.74
LMNA-223ENST00000515459 MYH2Q9UKX2 1941 aa19.65■□□□□ 0.74
LMNA-223ENST00000515459 PRKCZQ05513 592 aa19.65■□□□□ 0.74
LMNA-223ENST00000515459 ATP2B3Q16720 1220 aa19.65■□□□□ 0.74
LMNA-223ENST00000515459 GPAT2Q6NUI2 795 aa19.65■□□□□ 0.74
LMNA-223ENST00000515459 FBXO3Q9UK99 471 aa19.65■□□□□ 0.74
LMNA-223ENST00000515459 DENND2AQ9ULE3 1009 aa19.65■□□□□ 0.74
LMNA-223ENST00000515459 SALL1Q9NSC2 1324 aa19.65■□□□□ 0.74
LMNA-223ENST00000515459 FASTKD5Q7L8L6 764 aaKnown RBP19.64■□□□□ 0.73
LMNA-223ENST00000515459 UBE2Q1Q7Z7E8 422 aa19.64■□□□□ 0.73
LMNA-223ENST00000515459 ZFPM1Q8IX07 1006 aa19.64■□□□□ 0.73
LMNA-223ENST00000515459 SLAIN1Q8ND83 568 aa19.64■□□□□ 0.73
LMNA-223ENST00000515459 PICK1Q9NRD5 415 aa19.64■□□□□ 0.73
LMNA-223ENST00000515459 CEP126Q9P2H0 1117 aa19.64■□□□□ 0.73
LMNA-223ENST00000515459 RBM27Q9P2N5 1060 aaKnown RBP19.64■□□□□ 0.73
LMNA-223ENST00000515459 ZHX2Q9Y6X8 837 aa19.64■□□□□ 0.73
LMNA-223ENST00000515459 ATRNL1Q5VV63 1379 aa19.63■□□□□ 0.73
LMNA-223ENST00000515459 A0A0G2JLL6 359 aaPredicted RBP19.63■□□□□ 0.73
LMNA-223ENST00000515459 SEMA3EO15041 775 aa19.63■□□□□ 0.73
LMNA-223ENST00000515459 ENTPD3O75355 529 aa19.63■□□□□ 0.73
LMNA-223ENST00000515459 CIAO1O76071 339 aa19.63■□□□□ 0.73
LMNA-223ENST00000515459 PRRT2Q7Z6L0 340 aaPredicted RBP19.63■□□□□ 0.73
LMNA-223ENST00000515459 SCYL3Q8IZE3 742 aa19.63■□□□□ 0.73
LMNA-223ENST00000515459 U2AF1L4Q8WU68 220 aaKnown RBP19.63■□□□□ 0.73
LMNA-223ENST00000515459 IDI2Q9BXS1 227 aa19.63■□□□□ 0.73
LMNA-223ENST00000515459 SIL1Q9H173 461 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms