RNA–Protein interactions for RNA: ENST00000515343.1

AC025539.1-201, humanhuman

TSL 2 BASIC

Gene AC025539.1, Length 4,019 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025539.1-201ENST00000515343 HHIPQ96QV1 700 aa2.75□□□□□ -1.97
AC025539.1-201ENST00000515343 CCDC113Q9H0I3 377 aa2.75□□□□□ -1.97
AC025539.1-201ENST00000515343 ZNRF3Q9ULT6 936 aa2.75□□□□□ -1.97
AC025539.1-201ENST00000515343 HIF3AQ9Y2N7 669 aa2.75□□□□□ -1.97
AC025539.1-201ENST00000515343 TNFRSF10CO14798 259 aa2.74□□□□□ -1.97
AC025539.1-201ENST00000515343 FSCN2O14926 492 aa2.74□□□□□ -1.97
AC025539.1-201ENST00000515343 DEAF1O75398 565 aaPredicted RBP2.74□□□□□ -1.97
AC025539.1-201ENST00000515343 RGS9O75916 674 aaPredicted RBP2.74□□□□□ -1.97
AC025539.1-201ENST00000515343 MEI1Q5TIA1 1274 aa2.74□□□□□ -1.97
AC025539.1-201ENST00000515343 COL17A1Q9UMD9 1497 aaPredicted RBP2.74□□□□□ -1.97
AC025539.1-201ENST00000515343 A0A0A0MRY4 1105 aa2.74□□□□□ -1.97
AC025539.1-201ENST00000515343 SPDYE3A6NKU9 549 aa2.74□□□□□ -1.97
AC025539.1-201ENST00000515343 KCNMA1Q12791 1236 aa2.74□□□□□ -1.97
AC025539.1-201ENST00000515343 ADGRE1Q14246 886 aa2.74□□□□□ -1.97
AC025539.1-201ENST00000515343 ZC3H12AQ5D1E8 599 aaKnown RBP2.74□□□□□ -1.97
AC025539.1-201ENST00000515343 EXOSC6Q5RKV6 272 aaKnown RBP2.74□□□□□ -1.97
AC025539.1-201ENST00000515343 TTBK2Q6IQ55 1244 aa2.74□□□□□ -1.97
AC025539.1-201ENST00000515343 ZC3HAV1Q7Z2W4 902 aaKnown RBP2.74□□□□□ -1.97
AC025539.1-201ENST00000515343 VWCEQ96DN2 955 aa2.74□□□□□ -1.97
AC025539.1-201ENST00000515343 LAMC3Q9Y6N6 1575 aa2.74□□□□□ -1.97
AC025539.1-201ENST00000515343 ARL4DP49703 201 aa2.74□□□□□ -1.97
AC025539.1-201ENST00000515343 GNL2Q13823 731 aaKnown RBP2.74□□□□□ -1.97
AC025539.1-201ENST00000515343 CEP135Q66GS9 1140 aa2.74□□□□□ -1.97
AC025539.1-201ENST00000515343 PSAPL1Q6NUJ1 521 aa2.74□□□□□ -1.97
AC025539.1-201ENST00000515343 IGF2-ASQ6U949 168 aa2.74□□□□□ -1.97
AC025539.1-201ENST00000515343 ZNF296Q8WUU4 475 aaPredicted RBP2.74□□□□□ -1.97
AC025539.1-201ENST00000515343 KBTBD4Q9NVX7 518 aa2.74□□□□□ -1.97
AC025539.1-201ENST00000515343 TRIM33Q9UPN9 1127 aa2.74□□□□□ -1.97
AC025539.1-201ENST00000515343 GPR25O00155 361 aa2.73□□□□□ -1.97
AC025539.1-201ENST00000515343 LILRB5O75023 590 aa2.73□□□□□ -1.97
AC025539.1-201ENST00000515343 PAGE1O75459 146 aa2.73□□□□□ -1.97
AC025539.1-201ENST00000515343 ELNP15502 786 aa2.73□□□□□ -1.97
AC025539.1-201ENST00000515343 ZNF143P52747 638 aaPredicted RBP2.73□□□□□ -1.97
AC025539.1-201ENST00000515343 SEZ6L2Q6UXD5 910 aa2.73□□□□□ -1.97
AC025539.1-201ENST00000515343 SULF2Q8IWU5 870 aa2.73□□□□□ -1.97
AC025539.1-201ENST00000515343 FAM46AQ96IP4 442 aaKnown RBP2.73□□□□□ -1.97
AC025539.1-201ENST00000515343 SHDQ96IW2 340 aa2.73□□□□□ -1.97
AC025539.1-201ENST00000515343 FAM161BQ96MY7 647 aa2.73□□□□□ -1.97
AC025539.1-201ENST00000515343 COPRSQ9NQ92 184 aa2.73□□□□□ -1.97
AC025539.1-201ENST00000515343 NEURL1BA8MQ27 555 aa2.73□□□□□ -1.97
AC025539.1-201ENST00000515343 J3QW42 95 aa2.73□□□□□ -1.97
AC025539.1-201ENST00000515343 IKBKEQ14164 716 aa2.73□□□□□ -1.97
AC025539.1-201ENST00000515343 LRRFIP1Q32MZ4 808 aaKnown RBP2.73□□□□□ -1.97
AC025539.1-201ENST00000515343 LLGL2Q6P1M3 1020 aa2.73□□□□□ -1.97
AC025539.1-201ENST00000515343 KRT25Q7Z3Z0 450 aa2.73□□□□□ -1.97
AC025539.1-201ENST00000515343 IL22RA1Q8N6P7 574 aa2.73□□□□□ -1.97
AC025539.1-201ENST00000515343 GALNT6Q8NCL4 622 aa2.73□□□□□ -1.97
AC025539.1-201ENST00000515343 STK35Q8TDR2 534 aa2.73□□□□□ -1.97
AC025539.1-201ENST00000515343 TRIM11Q96F44 468 aa2.73□□□□□ -1.97
AC025539.1-201ENST00000515343 COX4I2Q96KJ9 171 aa2.73□□□□□ -1.97
AC025539.1-201ENST00000515343 CCSER2Q9H7U1 834 aa2.73□□□□□ -1.97
AC025539.1-201ENST00000515343 CRIM1Q9NZV1 1036 aa2.73□□□□□ -1.97
AC025539.1-201ENST00000515343 SIRPGQ9P1W8 387 aa2.73□□□□□ -1.97
AC025539.1-201ENST00000515343 WDR62O43379 1518 aa2.73□□□□□ -1.97
AC025539.1-201ENST00000515343 LMTK3Q96Q04 1460 aa2.73□□□□□ -1.97
AC025539.1-201ENST00000515343 HMGXB3Q12766 1538 aa2.73□□□□□ -1.97
AC025539.1-201ENST00000515343 AOC2O75106 756 aa2.73□□□□□ -1.97
AC025539.1-201ENST00000515343 PF4P02776 101 aa2.73□□□□□ -1.97
AC025539.1-201ENST00000515343 CELA3AP09093 270 aa2.73□□□□□ -1.97
AC025539.1-201ENST00000515343 CPB1P15086 417 aa2.73□□□□□ -1.97
AC025539.1-201ENST00000515343 GSK3AP49840 483 aa2.73□□□□□ -1.97
AC025539.1-201ENST00000515343 PAK2Q13177 524 aa2.73□□□□□ -1.97
AC025539.1-201ENST00000515343 TNNI3KQ59H18 835 aa2.73□□□□□ -1.97
AC025539.1-201ENST00000515343 WFDC8Q8IUA0 241 aa2.73□□□□□ -1.97
AC025539.1-201ENST00000515343 MRPL41Q8IXM3 137 aaKnown RBP2.73□□□□□ -1.97
AC025539.1-201ENST00000515343 DZIP1LQ8IYY4 767 aaKnown RBP2.73□□□□□ -1.97
AC025539.1-201ENST00000515343 MRPL18Q9H0U6 180 aaKnown RBP2.73□□□□□ -1.97
AC025539.1-201ENST00000515343 ACBD3Q9H3P7 528 aa2.73□□□□□ -1.97
AC025539.1-201ENST00000515343 EIF2AK2P19525 551 aaKnown RBP2.72□□□□□ -1.97
AC025539.1-201ENST00000515343 ARID5AQ03989 594 aa2.72□□□□□ -1.97
AC025539.1-201ENST00000515343 TESK1Q15569 626 aa2.72□□□□□ -1.97
AC025539.1-201ENST00000515343 CCDC85BQ15834 202 aaPredicted RBP2.72□□□□□ -1.97
AC025539.1-201ENST00000515343 GALNT11Q8NCW6 608 aa2.72□□□□□ -1.97
AC025539.1-201ENST00000515343 WHAMMQ8TF30 809 aa2.72□□□□□ -1.97
AC025539.1-201ENST00000515343 TM9SF2Q99805 663 aa2.72□□□□□ -1.97
AC025539.1-201ENST00000515343 NOP53Q9NZM5 478 aaKnown RBP2.72□□□□□ -1.97
AC025539.1-201ENST00000515343 POLR3KQ9Y2Y1 108 aaPredicted RBP2.72□□□□□ -1.97
AC025539.1-201ENST00000515343 M0R082 166 aa2.72□□□□□ -1.97
AC025539.1-201ENST00000515343 ADAM11O75078 769 aa2.72□□□□□ -1.97
AC025539.1-201ENST00000515343 NTF4P34130 210 aa2.72□□□□□ -1.97
AC025539.1-201ENST00000515343 PCBP4P57723 403 aaKnown RBP2.72□□□□□ -1.97
AC025539.1-201ENST00000515343 CABP4P57796 275 aa2.72□□□□□ -1.97
AC025539.1-201ENST00000515343 DIEXFQ68CQ4 756 aaKnown RBP2.72□□□□□ -1.97
AC025539.1-201ENST00000515343 KIAA1211Q6ZU35 1233 aa2.72□□□□□ -1.97
AC025539.1-201ENST00000515343 VPS37DQ86XT2 251 aa2.72□□□□□ -1.97
AC025539.1-201ENST00000515343 ZNF417Q8TAU3 575 aa2.72□□□□□ -1.97
AC025539.1-201ENST00000515343 NSUN5Q96P11 429 aaKnown RBP2.72□□□□□ -1.97
AC025539.1-201ENST00000515343 ZNF587Q96SQ5 575 aaPredicted RBP2.72□□□□□ -1.97
AC025539.1-201ENST00000515343 HIRIP3Q9BW71 556 aaPredicted RBP2.72□□□□□ -1.97
AC025539.1-201ENST00000515343 CNNM2Q9H8M5 875 aa2.72□□□□□ -1.97
AC025539.1-201ENST00000515343 F8W735 103 aaPredicted RBP2.72□□□□□ -1.97
AC025539.1-201ENST00000515343 ENPP3O14638 875 aa2.72□□□□□ -1.97
AC025539.1-201ENST00000515343 LONRF2Q1L5Z9 754 aa2.72□□□□□ -1.97
AC025539.1-201ENST00000515343 FOXD4L6Q3SYB3 417 aaPredicted RBP2.72□□□□□ -1.97
AC025539.1-201ENST00000515343 ZNF394Q53GI3 561 aa2.72□□□□□ -1.97
AC025539.1-201ENST00000515343 FOXD4L3Q6VB84 417 aaPredicted RBP2.72□□□□□ -1.97
AC025539.1-201ENST00000515343 MKL2Q9ULH7 1088 aa2.72□□□□□ -1.97
AC025539.1-201ENST00000515343 TTF2Q9UNY4 1162 aaKnown RBP2.72□□□□□ -1.97
AC025539.1-201ENST00000515343 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP2.71□□□□□ -1.97
AC025539.1-201ENST00000515343 CDC14CA4D256 554 aa2.71□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms