RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 CDC42BPAQ5VT25 1732 aa16.31■□□□□ 0.2
TRIO-222ENST00000515144 TMEM2Q9UHN6 1383 aa16.3■□□□□ 0.2
TRIO-222ENST00000515144 TRIM75PA6NK02 468 aa16.3■□□□□ 0.2
TRIO-222ENST00000515144 EYA2O00167 538 aa16.3■□□□□ 0.2
TRIO-222ENST00000515144 ERLIN1O75477 346 aa16.3■□□□□ 0.2
TRIO-222ENST00000515144 ZSCAN22P10073 491 aaPredicted RBP16.3■□□□□ 0.2
TRIO-222ENST00000515144 CCT6AP40227 531 aaKnown RBP16.3■□□□□ 0.2
TRIO-222ENST00000515144 NCAPG2Q86XI2 1143 aa16.3■□□□□ 0.2
TRIO-222ENST00000515144 RAD17O75943 681 aa16.3■□□□□ 0.2
TRIO-222ENST00000515144 BCAMP50895 628 aa16.3■□□□□ 0.2
TRIO-222ENST00000515144 PAFAH1B1P43034 410 aa16.3■□□□□ 0.2
TRIO-222ENST00000515144 PIK3AP1Q6ZUJ8 805 aa16.3■□□□□ 0.2
TRIO-222ENST00000515144 NCOA5Q9HCD5 579 aaKnown RBP16.3■□□□□ 0.2
TRIO-222ENST00000515144 PHKBQ93100 1093 aa16.3■□□□□ 0.2
TRIO-222ENST00000515144 ANO6Q4KMQ2 910 aa16.29■□□□□ 0.2
TRIO-222ENST00000515144 EFCAB6Q5THR3 1501 aa16.29■□□□□ 0.2
TRIO-222ENST00000515144 RUFY3Q7L099 469 aa16.29■□□□□ 0.2
TRIO-222ENST00000515144 GSTA5Q7RTV2 222 aa16.29■□□□□ 0.2
TRIO-222ENST00000515144 SOS1Q07889 1333 aaPredicted RBP16.29■□□□□ 0.2
TRIO-222ENST00000515144 KIF22Q14807 665 aa16.29■□□□□ 0.2
TRIO-222ENST00000515144 KDM5CP41229 1560 aa16.29■□□□□ 0.2
TRIO-222ENST00000515144 KIAA0754O94854 1291 aa16.29■□□□□ 0.2
TRIO-222ENST00000515144 CRACR2AQ9BSW2 395 aa16.29■□□□□ 0.2
TRIO-222ENST00000515144 NACA2Q9H009 215 aa16.29■□□□□ 0.2
TRIO-222ENST00000515144 SERPINA10Q9UK55 444 aa16.29■□□□□ 0.2
TRIO-222ENST00000515144 TXKP42681 527 aa16.29■□□□□ 0.2
TRIO-222ENST00000515144 BIRC3Q13489 604 aa16.29■□□□□ 0.2
TRIO-222ENST00000515144 MAST3O60307 1309 aa16.29■□□□□ 0.2
TRIO-222ENST00000515144 PPEF1O14829 653 aaPredicted RBP16.28■□□□□ 0.2
TRIO-222ENST00000515144 ACTN2P35609 894 aa16.28■□□□□ 0.2
TRIO-222ENST00000515144 USP37Q86T82 979 aa16.28■□□□□ 0.2
TRIO-222ENST00000515144 LPIN2Q92539 896 aa16.28■□□□□ 0.2
TRIO-222ENST00000515144 ALS2CR12Q96Q35 445 aa16.28■□□□□ 0.2
TRIO-222ENST00000515144 PYM1Q9BRP8 204 aaKnown RBP16.28■□□□□ 0.2
TRIO-222ENST00000515144 RBM28Q9NW13 759 aaKnown RBP16.28■□□□□ 0.2
TRIO-222ENST00000515144 CLTCQ00610 1675 aaKnown RBP16.28■□□□□ 0.2
TRIO-222ENST00000515144 RPS8P62241 208 aaKnown RBP16.28■□□□□ 0.2
TRIO-222ENST00000515144 RNF34Q969K3 372 aa16.28■□□□□ 0.2
TRIO-222ENST00000515144 ARAP3Q8WWN8 1544 aa16.28■□□□□ 0.2
TRIO-222ENST00000515144 NUP160Q12769 1436 aa16.28■□□□□ 0.2
TRIO-222ENST00000515144 TESPA1A2RU30 521 aaPredicted RBP16.28■□□□□ 0.2
TRIO-222ENST00000515144 EIF3JO75822 258 aaKnown RBP16.28■□□□□ 0.2
TRIO-222ENST00000515144 ARHGEF16Q5VV41 709 aa16.28■□□□□ 0.2
TRIO-222ENST00000515144 GPIHBP1Q8IV16 184 aa16.28■□□□□ 0.2
TRIO-222ENST00000515144 LRRC47Q8N1G4 583 aaKnown RBP16.28■□□□□ 0.2
TRIO-222ENST00000515144 ZSCAN12O43309 604 aa16.28■□□□□ 0.2
TRIO-222ENST00000515144 ZBTB7AO95365 584 aa16.28■□□□□ 0.2
TRIO-222ENST00000515144 PHKG2P15735 406 aa16.28■□□□□ 0.2
TRIO-222ENST00000515144 ZNF165P49910 485 aa16.28■□□□□ 0.2
TRIO-222ENST00000515144 UBE2HP62256 183 aa16.28■□□□□ 0.2
TRIO-222ENST00000515144 EDC3Q96F86 508 aaKnown RBP16.28■□□□□ 0.2
TRIO-222ENST00000515144 FNBP1Q96RU3 617 aa16.28■□□□□ 0.2
TRIO-222ENST00000515144 USP48Q86UV5 1035 aa16.28■□□□□ 0.2
TRIO-222ENST00000515144 ARHGAP45Q92619 1136 aa16.28■□□□□ 0.2
TRIO-222ENST00000515144 RAPGEF1Q13905 1077 aa16.28■□□□□ 0.2
TRIO-222ENST00000515144 ADCY5O95622 1261 aa16.27■□□□□ 0.2
TRIO-222ENST00000515144 GCKRQ14397 625 aa16.27■□□□□ 0.2
TRIO-222ENST00000515144 PAIP2Q9BPZ3 127 aaKnown RBP16.27■□□□□ 0.2
TRIO-222ENST00000515144 TARBP1Q13395 1621 aaKnown RBP16.27■□□□□ 0.2
TRIO-222ENST00000515144 UBXN4Q92575 508 aa16.27■□□□□ 0.2
TRIO-222ENST00000515144 PNMA6EA0A0J9YXQ4 647 aa16.27■□□□□ 0.19
TRIO-222ENST00000515144 Q3C1V9 767 aa16.27■□□□□ 0.19
TRIO-222ENST00000515144 V9GY48 417 aaPredicted RBP16.27■□□□□ 0.19
TRIO-222ENST00000515144 ERVV-2B6SEH9 535 aa16.27■□□□□ 0.19
TRIO-222ENST00000515144 KCNG4Q8TDN1 519 aa16.27■□□□□ 0.19
TRIO-222ENST00000515144 DDX19AQ9NUU7 478 aaKnown RBP16.27■□□□□ 0.19
TRIO-222ENST00000515144 MLH3Q9UHC1 1453 aa16.27■□□□□ 0.19
TRIO-222ENST00000515144 OTUD7AQ8TE49 926 aaPredicted RBP16.27■□□□□ 0.19
TRIO-222ENST00000515144 TESK2Q96S53 571 aa16.27■□□□□ 0.19
TRIO-222ENST00000515144 TTC41PQ6P2S7 1318 aa16.26■□□□□ 0.19
TRIO-222ENST00000515144 MROH5Q6ZUA9 1318 aa16.26■□□□□ 0.19
TRIO-222ENST00000515144 ERICH4A6NGS2 130 aa16.26■□□□□ 0.19
TRIO-222ENST00000515144 M0QZ92 97 aa16.26■□□□□ 0.19
TRIO-222ENST00000515144 ABL1P00519 1130 aa16.26■□□□□ 0.19
TRIO-222ENST00000515144 HDAC1Q13547 482 aaPredicted RBP16.26■□□□□ 0.19
TRIO-222ENST00000515144 FRMD4BQ9Y2L6 1034 aa16.26■□□□□ 0.19
TRIO-222ENST00000515144 CEP83Q9Y592 693 aa16.26■□□□□ 0.19
TRIO-222ENST00000515144 NPHP4O75161 1426 aaPredicted RBP16.26■□□□□ 0.19
TRIO-222ENST00000515144 SEPT12Q8IYM1 358 aa16.26■□□□□ 0.19
TRIO-222ENST00000515144 SPICE1Q8N0Z3 855 aa16.26■□□□□ 0.19
TRIO-222ENST00000515144 CWC15Q9P013 229 aaKnown RBP16.26■□□□□ 0.19
TRIO-222ENST00000515144 DHX32Q7L7V1 743 aaKnown RBP16.26■□□□□ 0.19
TRIO-222ENST00000515144 KRT19P08727 400 aa16.26■□□□□ 0.19
TRIO-222ENST00000515144 HS2ST1Q7LGA3 356 aa16.26■□□□□ 0.19
TRIO-222ENST00000515144 AOPEPQ8N6M6 819 aa16.26■□□□□ 0.19
TRIO-222ENST00000515144 NEURL1BA8MQ27 555 aa16.25■□□□□ 0.19
TRIO-222ENST00000515144 STRN3Q13033 797 aa16.25■□□□□ 0.19
TRIO-222ENST00000515144 RTL1A6NKG5 1358 aa16.25■□□□□ 0.19
TRIO-222ENST00000515144 ZNF830Q96NB3 372 aaPredicted RBP16.25■□□□□ 0.19
TRIO-222ENST00000515144 SAMD9LQ8IVG5 1584 aa16.25■□□□□ 0.19
TRIO-222ENST00000515144 PSMA7O14818 248 aa16.25■□□□□ 0.19
TRIO-222ENST00000515144 AKR1B10O60218 316 aa16.25■□□□□ 0.19
TRIO-222ENST00000515144 UBXN1Q04323 297 aa16.25■□□□□ 0.19
TRIO-222ENST00000515144 PUS7Q96PZ0 661 aaKnown RBP16.25■□□□□ 0.19
TRIO-222ENST00000515144 AZI2Q9H6S1 392 aa16.25■□□□□ 0.19
TRIO-222ENST00000515144 IFT74Q96LB3 600 aa16.25■□□□□ 0.19
TRIO-222ENST00000515144 IGBP1P78318 339 aa16.25■□□□□ 0.19
TRIO-222ENST00000515144 PLCB3Q01970 1234 aa16.25■□□□□ 0.19
TRIO-222ENST00000515144 ALAS1P13196 640 aa16.24■□□□□ 0.19
TRIO-222ENST00000515144 TAOK3Q9H2K8 898 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms