RNA–Protein interactions for RNA: ENST00000515109.5

PRDM5-212, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-212ENST00000515109 CCDC144BQ3MJ40 725 aa20.25■□□□□ 0.83
PRDM5-212ENST00000515109 NFXL1Q6ZNB6 911 aa20.25■□□□□ 0.83
PRDM5-212ENST00000515109 CCDC144CPQ8IYA2 1237 aa20.25■□□□□ 0.83
PRDM5-212ENST00000515109 MBD4O95243 580 aa20.25■□□□□ 0.83
PRDM5-212ENST00000515109 CDC27P30260 824 aa20.25■□□□□ 0.83
PRDM5-212ENST00000515109 AOPEPQ8N6M6 819 aa20.25■□□□□ 0.83
PRDM5-212ENST00000515109 RGS22Q8NE09 1264 aa20.25■□□□□ 0.83
PRDM5-212ENST00000515109 MRFAP1L1Q96HT8 127 aa20.25■□□□□ 0.83
PRDM5-212ENST00000515109 NAT10Q9H0A0 1025 aaKnown RBP20.25■□□□□ 0.83
PRDM5-212ENST00000515109 NAPBQ9H115 298 aa20.25■□□□□ 0.83
PRDM5-212ENST00000515109 EPB41L4AQ9HCS5 686 aaPredicted RBP20.25■□□□□ 0.83
PRDM5-212ENST00000515109 PATL2C9JE40 543 aaKnown RBP20.24■□□□□ 0.83
PRDM5-212ENST00000515109 ZBTB43O43298 467 aa20.24■□□□□ 0.83
PRDM5-212ENST00000515109 CHAF1AQ13111 956 aaPredicted RBP20.24■□□□□ 0.83
PRDM5-212ENST00000515109 IFNL3Q8IZI9 196 aa20.24■□□□□ 0.83
PRDM5-212ENST00000515109 PHKBQ93100 1093 aa20.24■□□□□ 0.83
PRDM5-212ENST00000515109 UTP14AQ9BVJ6 771 aaKnown RBP20.24■□□□□ 0.83
PRDM5-212ENST00000515109 SEC31BQ9NQW1 1179 aa20.24■□□□□ 0.83
PRDM5-212ENST00000515109 CCDC87Q9NVE4 849 aa20.24■□□□□ 0.83
PRDM5-212ENST00000515109 TAOK2Q9UL54 1235 aa20.24■□□□□ 0.83
PRDM5-212ENST00000515109 GTF2F1P35269 517 aaKnown RBP eCLIP20.24■□□□□ 0.83
PRDM5-212ENST00000515109 TMEM67Q5HYA8 995 aa20.24■□□□□ 0.83
PRDM5-212ENST00000515109 INTS5Q6P9B9 1019 aaKnown RBP20.24■□□□□ 0.83
PRDM5-212ENST00000515109 IGDCC4Q8TDY8 1250 aa20.24■□□□□ 0.83
PRDM5-212ENST00000515109 LY9Q9HBG7 655 aa20.24■□□□□ 0.83
PRDM5-212ENST00000515109 INCENPQ9NQS7 918 aa20.24■□□□□ 0.83
PRDM5-212ENST00000515109 GOLGA8AA7E2F4 631 aa20.23■□□□□ 0.83
PRDM5-212ENST00000515109 ZRSR1Q15695 479 aaKnown RBP20.23■□□□□ 0.83
PRDM5-212ENST00000515109 KRT40Q6A162 431 aa20.23■□□□□ 0.83
PRDM5-212ENST00000515109 CACTINQ8WUQ7 758 aaKnown RBP20.23■□□□□ 0.83
PRDM5-212ENST00000515109 ARMT1Q9H993 441 aa20.23■□□□□ 0.83
PRDM5-212ENST00000515109 KIAA1468Q9P260 1216 aa20.23■□□□□ 0.83
PRDM5-212ENST00000515109 TIAM2Q8IVF5 1701 aa20.23■□□□□ 0.83
PRDM5-212ENST00000515109 COL22A1Q8NFW1 1626 aaPredicted RBP20.23■□□□□ 0.83
PRDM5-212ENST00000515109 CTDSPL2Q05D32 466 aa20.23■□□□□ 0.83
PRDM5-212ENST00000515109 VPS37DQ86XT2 251 aa20.23■□□□□ 0.83
PRDM5-212ENST00000515109 LAMB2P55268 1798 aa20.22■□□□□ 0.83
PRDM5-212ENST00000515109 ROBO1Q9Y6N7 1651 aa20.22■□□□□ 0.83
PRDM5-212ENST00000515109 CRKLP46109 303 aaKnown RBP20.22■□□□□ 0.83
PRDM5-212ENST00000515109 GNL2Q13823 731 aaKnown RBP20.22■□□□□ 0.83
PRDM5-212ENST00000515109 AXDND1Q5T1B0 1012 aaPredicted RBP20.22■□□□□ 0.83
PRDM5-212ENST00000515109 SGMS1Q86VZ5 419 aa20.22■□□□□ 0.83
PRDM5-212ENST00000515109 MYL10Q9BUA6 226 aa20.22■□□□□ 0.83
PRDM5-212ENST00000515109 KDM4FA0A1W2PPD8 638 aa20.22■□□□□ 0.83
PRDM5-212ENST00000515109 ZNF202O95125 648 aa20.22■□□□□ 0.83
PRDM5-212ENST00000515109 ATP6V1AP38606 617 aa20.22■□□□□ 0.83
PRDM5-212ENST00000515109 IARSP41252 1262 aaKnown RBP20.22■□□□□ 0.83
PRDM5-212ENST00000515109 GLIPR1L2Q4G1C9 344 aa20.22■□□□□ 0.83
PRDM5-212ENST00000515109 UBE2Q2Q8WVN8 375 aa20.22■□□□□ 0.83
PRDM5-212ENST00000515109 IFIT3O14879 490 aaKnown RBP20.21■□□□□ 0.83
PRDM5-212ENST00000515109 PFKFB1P16118 471 aa20.21■□□□□ 0.83
PRDM5-212ENST00000515109 CMA1P23946 247 aa20.21■□□□□ 0.83
PRDM5-212ENST00000515109 MARCKSP29966 332 aaPredicted RBP20.21■□□□□ 0.83
PRDM5-212ENST00000515109 SLC39A14Q15043 492 aa20.21■□□□□ 0.83
PRDM5-212ENST00000515109 CCDC152Q4G0S7 254 aa20.21■□□□□ 0.83
PRDM5-212ENST00000515109 MTERF4Q7Z6M4 381 aaKnown RBP20.21■□□□□ 0.83
PRDM5-212ENST00000515109 TSC1Q92574 1164 aa20.21■□□□□ 0.83
PRDM5-212ENST00000515109 MROH7-TTC4A0A0A0MT08 1334 aa20.21■□□□□ 0.83
PRDM5-212ENST00000515109 BCORQ6W2J9 1755 aa20.21■□□□□ 0.83
PRDM5-212ENST00000515109 SLC3A2P08195 630 aaKnown RBP20.2■□□□□ 0.82
PRDM5-212ENST00000515109 NTRK3Q16288 839 aa20.2■□□□□ 0.82
PRDM5-212ENST00000515109 PARP10Q53GL7 1025 aa20.2■□□□□ 0.82
PRDM5-212ENST00000515109 ZSWIM5Q9P217 1185 aa20.2■□□□□ 0.82
PRDM5-212ENST00000515109 RREB1Q92766 1687 aa20.2■□□□□ 0.82
PRDM5-212ENST00000515109 MYH14Q7Z406 1995 aaKnown RBP20.2■□□□□ 0.82
PRDM5-212ENST00000515109 GSG1L2A8MUP6 293 aa20.2■□□□□ 0.82
PRDM5-212ENST00000515109 RANBP6O60518 1105 aaKnown RBP20.2■□□□□ 0.82
PRDM5-212ENST00000515109 WDHD1O75717 1129 aaPredicted RBP20.2■□□□□ 0.82
PRDM5-212ENST00000515109 IGHMBP2P38935 993 aaKnown RBP20.2■□□□□ 0.82
PRDM5-212ENST00000515109 LIFRP42702 1097 aa20.2■□□□□ 0.82
PRDM5-212ENST00000515109 TRIM29Q14134 588 aa20.2■□□□□ 0.82
PRDM5-212ENST00000515109 DPCR1Q3MIW9 517 aa20.2■□□□□ 0.82
PRDM5-212ENST00000515109 ACSBG1Q96GR2 724 aa20.2■□□□□ 0.82
PRDM5-212ENST00000515109 CNNM2Q9H8M5 875 aa20.2■□□□□ 0.82
PRDM5-212ENST00000515109 FAM217BQ9NTX9 383 aaPredicted RBP20.2■□□□□ 0.82
PRDM5-212ENST00000515109 SLC12A7Q9Y666 1083 aa20.2■□□□□ 0.82
PRDM5-212ENST00000515109 CCDC69A6NI79 296 aa20.19■□□□□ 0.82
PRDM5-212ENST00000515109 CAMTA2O94983 1202 aa20.19■□□□□ 0.82
PRDM5-212ENST00000515109 BCAMP50895 628 aa20.19■□□□□ 0.82
PRDM5-212ENST00000515109 AKNAD1Q5T1N1 836 aa20.19■□□□□ 0.82
PRDM5-212ENST00000515109 LRRC8AQ8IWT6 810 aa20.19■□□□□ 0.82
PRDM5-212ENST00000515109 TACC3Q9Y6A5 838 aa20.19■□□□□ 0.82
PRDM5-212ENST00000515109 PRKAB2O43741 272 aa20.19■□□□□ 0.82
PRDM5-212ENST00000515109 TDO2P48775 406 aa20.19■□□□□ 0.82
PRDM5-212ENST00000515109 KRT23Q9C075 422 aa20.19■□□□□ 0.82
PRDM5-212ENST00000515109 RIOK3O14730 519 aaKnown RBP20.18■□□□□ 0.82
PRDM5-212ENST00000515109 DDB1Q16531 1140 aa20.18■□□□□ 0.82
PRDM5-212ENST00000515109 MFSD6Q6ZSS7 791 aa20.18■□□□□ 0.82
PRDM5-212ENST00000515109 LCORLQ8N3X6 602 aa20.18■□□□□ 0.82
PRDM5-212ENST00000515109 C16orf45Q96MC5 204 aaPredicted RBP20.18■□□□□ 0.82
PRDM5-212ENST00000515109 SLC26A6Q9BXS9 759 aa20.18■□□□□ 0.82
PRDM5-212ENST00000515109 NIP7Q9Y221 180 aaKnown RBP eCLIP20.18■□□□□ 0.82
PRDM5-212ENST00000515109 LOC102724428A0A0B4J2F2 783 aa20.18■□□□□ 0.82
PRDM5-212ENST00000515109 BIN1O00499 593 aa20.18■□□□□ 0.82
PRDM5-212ENST00000515109 NEMFO60524 1076 aa20.18■□□□□ 0.82
PRDM5-212ENST00000515109 GNAT2P19087 354 aa20.18■□□□□ 0.82
PRDM5-212ENST00000515109 SIK1P57059 783 aa20.18■□□□□ 0.82
PRDM5-212ENST00000515109 SSRP1Q08945 709 aaKnown RBP20.18■□□□□ 0.82
PRDM5-212ENST00000515109 ARID5BQ14865 1188 aa20.18■□□□□ 0.82
PRDM5-212ENST00000515109 RRP12Q5JTH9 1297 aaKnown RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms