RNA–Protein interactions for RNA: ENST00000514834.1

ITGA3-214, Transcript of integrin subunit alpha 3, humanhuman

TSL 1 (best)

Gene ITGA3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-214ENST00000514834 ZFPM1Q8IX07 1006 aa17.11■□□□□ 0.33
ITGA3-214ENST00000514834 SIRT2Q8IXJ6 389 aa17.11■□□□□ 0.33
ITGA3-214ENST00000514834 SPATA5Q8NB90 893 aa17.11■□□□□ 0.33
ITGA3-214ENST00000514834 ZBTB40Q9NUA8 1239 aa17.11■□□□□ 0.33
ITGA3-214ENST00000514834 TLR7Q9NYK1 1049 aaKnown RBP17.11■□□□□ 0.33
ITGA3-214ENST00000514834 EXOC6BQ9Y2D4 811 aa17.11■□□□□ 0.33
ITGA3-214ENST00000514834 PDS5AQ29RF7 1337 aaKnown RBP17.11■□□□□ 0.33
ITGA3-214ENST00000514834 TCP10Q12799 353 aa17.1■□□□□ 0.33
ITGA3-214ENST00000514834 FKBP1CQ5VVH2 108 aa17.1■□□□□ 0.33
ITGA3-214ENST00000514834 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.1■□□□□ 0.33
ITGA3-214ENST00000514834 CNKSR2Q8WXI2 1034 aa17.1■□□□□ 0.33
ITGA3-214ENST00000514834 WNK4Q96J92 1243 aa17.1■□□□□ 0.33
ITGA3-214ENST00000514834 GPR108Q9NPR9 543 aa17.1■□□□□ 0.33
ITGA3-214ENST00000514834 SNRKQ9NRH2 765 aa17.1■□□□□ 0.33
ITGA3-214ENST00000514834 USP40Q9NVE5 1235 aa17.1■□□□□ 0.33
ITGA3-214ENST00000514834 FAM198AQ9UFP1 575 aa17.1■□□□□ 0.33
ITGA3-214ENST00000514834 IREB2P48200 963 aaKnown RBP17.09■□□□□ 0.33
ITGA3-214ENST00000514834 TM4SF4P48230 202 aa17.09■□□□□ 0.33
ITGA3-214ENST00000514834 MECOMQ03112 1051 aa17.09■□□□□ 0.33
ITGA3-214ENST00000514834 FAM83AQ86UY5 434 aa17.09■□□□□ 0.33
ITGA3-214ENST00000514834 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.09■□□□□ 0.33
ITGA3-214ENST00000514834 EAF2Q96CJ1 260 aaPredicted RBP17.09■□□□□ 0.33
ITGA3-214ENST00000514834 CCDC8Q9H0W5 538 aaPredicted RBP17.09■□□□□ 0.33
ITGA3-214ENST00000514834 R3HDMLQ9H3Y0 253 aa17.09■□□□□ 0.33
ITGA3-214ENST00000514834 ELP3Q9H9T3 547 aa17.09■□□□□ 0.33
ITGA3-214ENST00000514834 SAGE1Q9NXZ1 904 aa17.09■□□□□ 0.33
ITGA3-214ENST00000514834 TMOD2Q9NZR1 351 aa17.09■□□□□ 0.33
ITGA3-214ENST00000514834 DBNLQ9UJU6 430 aaKnown RBP17.09■□□□□ 0.33
ITGA3-214ENST00000514834 GAKO14976 1311 aa17.09■□□□□ 0.33
ITGA3-214ENST00000514834 MYO5AQ9Y4I1 1855 aaKnown RBP17.09■□□□□ 0.33
ITGA3-214ENST00000514834 TBC1D8O95759 1140 aa17.08■□□□□ 0.32
ITGA3-214ENST00000514834 DZIP1Q86YF9 867 aaKnown RBP17.08■□□□□ 0.32
ITGA3-214ENST00000514834 ANKRD13AQ8IZ07 590 aa17.08■□□□□ 0.32
ITGA3-214ENST00000514834 VGLL4Q14135 290 aa17.07■□□□□ 0.32
ITGA3-214ENST00000514834 PDE3AQ14432 1141 aa17.07■□□□□ 0.32
ITGA3-214ENST00000514834 ERICH6Q7L0X2 663 aa17.07■□□□□ 0.32
ITGA3-214ENST00000514834 MIGA2Q7L4E1 593 aa17.07■□□□□ 0.32
ITGA3-214ENST00000514834 ZGPATQ8N5A5 531 aaKnown RBP17.07■□□□□ 0.32
ITGA3-214ENST00000514834 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.07■□□□□ 0.32
ITGA3-214ENST00000514834 FAM151AQ8WW52 585 aa17.07■□□□□ 0.32
ITGA3-214ENST00000514834 FAM163AQ96GL9 167 aaPredicted RBP17.07■□□□□ 0.32
ITGA3-214ENST00000514834 DDX19BQ9UMR2 479 aa17.07■□□□□ 0.32
ITGA3-214ENST00000514834 AK9Q5TCS8 1911 aa17.07■□□□□ 0.32
ITGA3-214ENST00000514834 UQCRFS1P1P0C7P4 283 aa17.06■□□□□ 0.32
ITGA3-214ENST00000514834 SLURP2P0DP57 97 aa17.06■□□□□ 0.32
ITGA3-214ENST00000514834 MAP3K9P80192 1104 aa17.06■□□□□ 0.32
ITGA3-214ENST00000514834 TTC39AQ5SRH9 613 aa17.06■□□□□ 0.32
ITGA3-214ENST00000514834 SPTY2D1Q68D10 685 aaPredicted RBP17.06■□□□□ 0.32
ITGA3-214ENST00000514834 REM2Q8IYK8 340 aaPredicted RBP17.06■□□□□ 0.32
ITGA3-214ENST00000514834 ZKSCAN4Q969J2 545 aaPredicted RBP17.06■□□□□ 0.32
ITGA3-214ENST00000514834 NSUN4Q96CB9 384 aaKnown RBP17.06■□□□□ 0.32
ITGA3-214ENST00000514834 DDX4Q9NQI0 724 aaKnown RBP17.06■□□□□ 0.32
ITGA3-214ENST00000514834 LAMB1P07942 1786 aa17.05■□□□□ 0.32
ITGA3-214ENST00000514834 MROH7-TTC4A0A0A0MT08 1334 aa17.05■□□□□ 0.32
ITGA3-214ENST00000514834 UNCXA6NJT0 531 aa17.05■□□□□ 0.32
ITGA3-214ENST00000514834 APBB1O00213 710 aa17.05■□□□□ 0.32
ITGA3-214ENST00000514834 SLC34A2O95436 690 aa17.05■□□□□ 0.32
ITGA3-214ENST00000514834 CYP2E1P05181 493 aaPredicted RBP17.05■□□□□ 0.32
ITGA3-214ENST00000514834 BTDP43251 543 aa17.05■□□□□ 0.32
ITGA3-214ENST00000514834 RGS3P49796 1198 aa17.05■□□□□ 0.32
ITGA3-214ENST00000514834 SH3BP5LQ7L8J4 393 aa17.05■□□□□ 0.32
ITGA3-214ENST00000514834 OPTNQ96CV9 577 aa17.05■□□□□ 0.32
ITGA3-214ENST00000514834 IL1RAPL2Q9NP60 686 aa17.05■□□□□ 0.32
ITGA3-214ENST00000514834 NDUFB9Q9Y6M9 179 aa17.05■□□□□ 0.32
ITGA3-214ENST00000514834 RFX7Q2KHR2 1363 aa17.04■□□□□ 0.32
ITGA3-214ENST00000514834 GPR75-ASB3A0A0A6YYF3 556 aa17.04■□□□□ 0.32
ITGA3-214ENST00000514834 IGF2BP3O00425 579 aaKnown RBP eCLIP17.04■□□□□ 0.32
ITGA3-214ENST00000514834 WDHD1O75717 1129 aaPredicted RBP17.04■□□□□ 0.32
ITGA3-214ENST00000514834 ZBTB48P10074 688 aaPredicted RBP17.04■□□□□ 0.32
ITGA3-214ENST00000514834 ZAP70P43403 619 aa17.04■□□□□ 0.32
ITGA3-214ENST00000514834 RHBDL3P58872 404 aa17.04■□□□□ 0.32
ITGA3-214ENST00000514834 WRNIP1Q96S55 665 aa17.04■□□□□ 0.32
ITGA3-214ENST00000514834 PTPN18Q99952 460 aa17.04■□□□□ 0.32
ITGA3-214ENST00000514834 PIH1D3Q9NQM4 214 aaKnown RBP17.04■□□□□ 0.32
ITGA3-214ENST00000514834 RAI14Q9P0K7 980 aa17.04■□□□□ 0.32
ITGA3-214ENST00000514834 SNCAIPQ9Y6H5 919 aa17.04■□□□□ 0.32
ITGA3-214ENST00000514834 RPAP1Q9BWH6 1393 aaPredicted RBP17.03■□□□□ 0.32
ITGA3-214ENST00000514834 MANSC4A6NHS7 340 aaPredicted RBP17.03■□□□□ 0.32
ITGA3-214ENST00000514834 INPP5BP32019 993 aa17.03■□□□□ 0.32
ITGA3-214ENST00000514834 SREBF2Q12772 1141 aa17.03■□□□□ 0.32
ITGA3-214ENST00000514834 CCDC158Q5M9N0 1113 aa17.03■□□□□ 0.32
ITGA3-214ENST00000514834 AACSQ86V21 672 aa17.03■□□□□ 0.32
ITGA3-214ENST00000514834 IFNL1Q8IU54 200 aa17.03■□□□□ 0.32
ITGA3-214ENST00000514834 RPAP2Q8IXW5 612 aaPredicted RBP17.03■□□□□ 0.32
ITGA3-214ENST00000514834 RHPN1Q8TCX5 695 aa17.03■□□□□ 0.32
ITGA3-214ENST00000514834 ABHD8Q96I13 439 aa17.03■□□□□ 0.32
ITGA3-214ENST00000514834 MS4A4AQ96JQ5 239 aa17.03■□□□□ 0.32
ITGA3-214ENST00000514834 IDI2Q9BXS1 227 aa17.03■□□□□ 0.32
ITGA3-214ENST00000514834 LRP2BPQ9P2M1 347 aa17.03■□□□□ 0.32
ITGA3-214ENST00000514834 DDTLA6NHG4 134 aaPredicted RBP17.02■□□□□ 0.32
ITGA3-214ENST00000514834 ADGRA1Q86SQ6 560 aa17.02■□□□□ 0.32
ITGA3-214ENST00000514834 OTUD5Q96G74 571 aa17.02■□□□□ 0.32
ITGA3-214ENST00000514834 ZNF512BQ96KM6 892 aaPredicted RBP17.02■□□□□ 0.32
ITGA3-214ENST00000514834 MCOLN1Q9GZU1 580 aa17.02■□□□□ 0.32
ITGA3-214ENST00000514834 BCL11AQ9H165 835 aa17.02■□□□□ 0.32
ITGA3-214ENST00000514834 ATRNL1Q5VV63 1379 aa17.02■□□□□ 0.31
ITGA3-214ENST00000514834 PICALMQ13492 652 aa17.01■□□□□ 0.31
ITGA3-214ENST00000514834 DGKZQ13574 1117 aa17.01■□□□□ 0.31
ITGA3-214ENST00000514834 SLF2Q8IX21 1173 aa17.01■□□□□ 0.31
ITGA3-214ENST00000514834 CHMP4BQ9H444 224 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms