RNA–Protein interactions for RNA: ENST00000514831.1

SMAD1-214, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-214ENST00000514831 ARHGAP39Q9C0H5 1083 aa28.66■■■□□ 2.18
SMAD1-214ENST00000514831 SLC4A8Q2Y0W8 1093 aa28.65■■■□□ 2.18
SMAD1-214ENST00000514831 ZNF341Q9BYN7 854 aa28.65■■■□□ 2.18
SMAD1-214ENST00000514831 PPATQ06203 517 aa28.64■■■□□ 2.18
SMAD1-214ENST00000514831 USP44Q9H0E7 712 aa28.64■■■□□ 2.18
SMAD1-214ENST00000514831 AK9Q5TCS8 1911 aa28.63■■■□□ 2.17
SMAD1-214ENST00000514831 PRMT2P55345 433 aa28.63■■■□□ 2.17
SMAD1-214ENST00000514831 WDR66Q8TBY9 1149 aa28.63■■■□□ 2.17
SMAD1-214ENST00000514831 SLC5A1P13866 664 aa28.62■■■□□ 2.17
SMAD1-214ENST00000514831 SH3TC2Q8TF17 1288 aa28.62■■■□□ 2.17
SMAD1-214ENST00000514831 FAM151AQ8WW52 585 aa28.62■■■□□ 2.17
SMAD1-214ENST00000514831 EYA2O00167 538 aa28.61■■■□□ 2.17
SMAD1-214ENST00000514831 INPP5BP32019 993 aa28.61■■■□□ 2.17
SMAD1-214ENST00000514831 RFX5P48382 616 aaPredicted RBP28.61■■■□□ 2.17
SMAD1-214ENST00000514831 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.61■■■□□ 2.17
SMAD1-214ENST00000514831 LPIN2Q92539 896 aa28.61■■■□□ 2.17
SMAD1-214ENST00000514831 DOCK2Q92608 1830 aa28.6■■■□□ 2.17
SMAD1-214ENST00000514831 C17orf99Q6UX52 265 aa28.6■■■□□ 2.17
SMAD1-214ENST00000514831 MIGA2Q7L4E1 593 aa28.6■■■□□ 2.17
SMAD1-214ENST00000514831 ANKRD23Q86SG2 305 aa28.6■■■□□ 2.17
SMAD1-214ENST00000514831 DAGLAQ9Y4D2 1042 aa28.6■■■□□ 2.17
SMAD1-214ENST00000514831 ZNF112Q9UJU3 913 aa28.59■■■□□ 2.17
SMAD1-214ENST00000514831 KCNH4Q9UQ05 1017 aa28.59■■■□□ 2.17
SMAD1-214ENST00000514831 ADGRA2Q96PE1 1338 aa28.59■■■□□ 2.17
SMAD1-214ENST00000514831 MYCP01106 439 aaPredicted RBP28.58■■■□□ 2.17
SMAD1-214ENST00000514831 SSH1Q8WYL5 1049 aa28.58■■■□□ 2.17
SMAD1-214ENST00000514831 FXR1P51114 621 aaKnown RBP eCLIP28.57■■■□□ 2.16
SMAD1-214ENST00000514831 NOL9Q5SY16 702 aaKnown RBP28.57■■■□□ 2.16
SMAD1-214ENST00000514831 CDC42EP5Q6NZY7 148 aa28.57■■■□□ 2.16
SMAD1-214ENST00000514831 CTGFP29279 349 aa28.56■■■□□ 2.16
SMAD1-214ENST00000514831 ZEB1P37275 1124 aaPredicted RBP28.56■■■□□ 2.16
SMAD1-214ENST00000514831 DIXDC1Q155Q3 683 aa28.56■■■□□ 2.16
SMAD1-214ENST00000514831 ATG9AQ7Z3C6 839 aa28.56■■■□□ 2.16
SMAD1-214ENST00000514831 CPA4Q9UI42 421 aa28.56■■■□□ 2.16
SMAD1-214ENST00000514831 MGAMO43451 1857 aa28.55■■■□□ 2.16
SMAD1-214ENST00000514831 PDHXO00330 501 aa28.55■■■□□ 2.16
SMAD1-214ENST00000514831 PRDX5P30044 214 aa28.55■■■□□ 2.16
SMAD1-214ENST00000514831 TCP10Q12799 353 aa28.55■■■□□ 2.16
SMAD1-214ENST00000514831 NFIAQ12857 509 aa28.55■■■□□ 2.16
SMAD1-214ENST00000514831 TRIM47Q96LD4 638 aa28.55■■■□□ 2.16
SMAD1-214ENST00000514831 SRRDQ9UH36 339 aa28.55■■■□□ 2.16
SMAD1-214ENST00000514831 MOGSQ13724 837 aa28.54■■■□□ 2.16
SMAD1-214ENST00000514831 FBXO3Q9UK99 471 aa28.54■■■□□ 2.16
SMAD1-214ENST00000514831 CEP290O15078 2479 aa28.53■■■□□ 2.16
SMAD1-214ENST00000514831 MYH2Q9UKX2 1941 aa28.53■■■□□ 2.16
SMAD1-214ENST00000514831 SALL1Q9NSC2 1324 aa28.53■■■□□ 2.16
SMAD1-214ENST00000514831 E9PSI1 815 aa28.53■■■□□ 2.16
SMAD1-214ENST00000514831 PSMC4P43686 418 aa28.53■■■□□ 2.16
SMAD1-214ENST00000514831 FAM198AQ9UFP1 575 aa28.53■■■□□ 2.16
SMAD1-214ENST00000514831 COLQQ9Y215 455 aaPredicted RBP28.53■■■□□ 2.16
SMAD1-214ENST00000514831 ATRNL1Q5VV63 1379 aa28.52■■■□□ 2.16
SMAD1-214ENST00000514831 LDHBP07195 334 aaKnown RBP28.52■■■□□ 2.16
SMAD1-214ENST00000514831 HOXD10P28358 340 aa28.52■■■□□ 2.16
SMAD1-214ENST00000514831 SHISA4Q96DD7 197 aa28.52■■■□□ 2.16
SMAD1-214ENST00000514831 PTPRFP10586 1907 aa28.51■■■□□ 2.16
SMAD1-214ENST00000514831 CIAO1O76071 339 aa28.51■■■□□ 2.15
SMAD1-214ENST00000514831 OSBPP22059 807 aa28.51■■■□□ 2.15
SMAD1-214ENST00000514831 MTFR1Q15390 333 aa28.51■■■□□ 2.15
SMAD1-214ENST00000514831 ATP2B3Q16720 1220 aa28.51■■■□□ 2.15
SMAD1-214ENST00000514831 GNL3LQ9NVN8 582 aaKnown RBP28.51■■■□□ 2.15
SMAD1-214ENST00000514831 ZNF316A6NFI3 1004 aaPredicted RBP28.5■■■□□ 2.15
SMAD1-214ENST00000514831 ECM2O94769 699 aaPredicted RBP28.5■■■□□ 2.15
SMAD1-214ENST00000514831 ALDH1L2Q3SY69 923 aa28.5■■■□□ 2.15
SMAD1-214ENST00000514831 PARK7Q99497 189 aaKnown RBP28.5■■■□□ 2.15
SMAD1-214ENST00000514831 RFX7Q2KHR2 1363 aa28.5■■■□□ 2.15
SMAD1-214ENST00000514831 MYPNQ86TC9 1320 aa28.49■■■□□ 2.15
SMAD1-214ENST00000514831 DOCK1Q14185 1865 aa28.49■■■□□ 2.15
SMAD1-214ENST00000514831 H0YGN5 161 aa28.49■■■□□ 2.15
SMAD1-214ENST00000514831 SEMA3EO15041 775 aa28.49■■■□□ 2.15
SMAD1-214ENST00000514831 ZBTB22O15209 634 aa28.49■■■□□ 2.15
SMAD1-214ENST00000514831 GRK4P32298 578 aa28.49■■■□□ 2.15
SMAD1-214ENST00000514831 RAET1EQ8TD07 263 aa28.49■■■□□ 2.15
SMAD1-214ENST00000514831 SIL1Q9H173 461 aa28.49■■■□□ 2.15
SMAD1-214ENST00000514831 USP40Q9NVE5 1235 aa28.49■■■□□ 2.15
SMAD1-214ENST00000514831 CXCL11O14625 94 aa28.48■■■□□ 2.15
SMAD1-214ENST00000514831 FMNL1O95466 1100 aaPredicted RBP28.48■■■□□ 2.15
SMAD1-214ENST00000514831 NKX2-3Q8TAU0 364 aa28.48■■■□□ 2.15
SMAD1-214ENST00000514831 CEP126Q9P2H0 1117 aa28.48■■■□□ 2.15
SMAD1-214ENST00000514831 DENND2AQ9ULE3 1009 aa28.48■■■□□ 2.15
SMAD1-214ENST00000514831 UBTFL1P0CB47 393 aaPredicted RBP28.47■■■□□ 2.15
SMAD1-214ENST00000514831 BCRP11274 1271 aa28.47■■■□□ 2.15
SMAD1-214ENST00000514831 PHIPQ8WWQ0 1821 aa28.47■■■□□ 2.15
SMAD1-214ENST00000514831 TRIOBPQ9H2D6 2365 aa28.47■■■□□ 2.15
SMAD1-214ENST00000514831 PHKA1P46020 1223 aa28.46■■■□□ 2.15
SMAD1-214ENST00000514831 SLFN5Q08AF3 891 aa28.46■■■□□ 2.15
SMAD1-214ENST00000514831 GPAT2Q6NUI2 795 aa28.46■■■□□ 2.15
SMAD1-214ENST00000514831 ZFPM1Q8IX07 1006 aa28.46■■■□□ 2.15
SMAD1-214ENST00000514831 IDI2Q9BXS1 227 aa28.46■■■□□ 2.15
SMAD1-214ENST00000514831 GAKO14976 1311 aa28.45■■■□□ 2.15
SMAD1-214ENST00000514831 SCYL3Q8IZE3 742 aa28.45■■■□□ 2.14
SMAD1-214ENST00000514831 SMC4Q9NTJ3 1288 aa28.45■■■□□ 2.14
SMAD1-214ENST00000514831 PHF20L1A8MW92 1017 aa28.44■■■□□ 2.14
SMAD1-214ENST00000514831 ENTPD3O75355 529 aa28.44■■■□□ 2.14
SMAD1-214ENST00000514831 CYP2C8P10632 490 aa28.44■■■□□ 2.14
SMAD1-214ENST00000514831 IL15P40933 162 aaPredicted RBP28.44■■■□□ 2.14
SMAD1-214ENST00000514831 GJA8P48165 433 aa28.44■■■□□ 2.14
SMAD1-214ENST00000514831 FCGRTP55899 365 aa28.44■■■□□ 2.14
SMAD1-214ENST00000514831 ZGPATQ8N5A5 531 aaKnown RBP28.44■■■□□ 2.14
SMAD1-214ENST00000514831 A0A0G2JLL6 359 aaPredicted RBP28.43■■■□□ 2.14
SMAD1-214ENST00000514831 GJB1P08034 283 aa28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms