RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 ZNF341Q9BYN7 854 aa25.65■■□□□ 1.7
SQSTM1-215ENST00000514093 ALDH1L1O75891 902 aa25.64■■□□□ 1.7
SQSTM1-215ENST00000514093 NBPF7P0C2Y1 421 aaPredicted RBP25.64■■□□□ 1.7
SQSTM1-215ENST00000514093 CCL5P13501 91 aa25.64■■□□□ 1.7
SQSTM1-215ENST00000514093 METTL24Q5JXM2 366 aa25.64■■□□□ 1.7
SQSTM1-215ENST00000514093 ANKRD23Q86SG2 305 aa25.64■■□□□ 1.7
SQSTM1-215ENST00000514093 HOOK2Q96ED9 719 aa25.64■■□□□ 1.7
SQSTM1-215ENST00000514093 SRCIN1Q9C0H9 1055 aa25.64■■□□□ 1.7
SQSTM1-215ENST00000514093 BIN2Q9UBW5 565 aaPredicted RBP25.64■■□□□ 1.7
SQSTM1-215ENST00000514093 MYPNQ86TC9 1320 aa25.63■■□□□ 1.69
SQSTM1-215ENST00000514093 RANBP2P49792 3224 aaKnown RBP25.63■■□□□ 1.69
SQSTM1-215ENST00000514093 HOXD10P28358 340 aa25.63■■□□□ 1.69
SQSTM1-215ENST00000514093 RNF208Q9H0X6 261 aa25.63■■□□□ 1.69
SQSTM1-215ENST00000514093 GJA8P48165 433 aa25.62■■□□□ 1.69
SQSTM1-215ENST00000514093 FKBP1CQ5VVH2 108 aa25.62■■□□□ 1.69
SQSTM1-215ENST00000514093 NKX2-3Q8TAU0 364 aa25.62■■□□□ 1.69
SQSTM1-215ENST00000514093 MRIQ9BWK5 157 aa25.62■■□□□ 1.69
SQSTM1-215ENST00000514093 SPINK5Q9NQ38 1064 aaPredicted RBP25.62■■□□□ 1.69
SQSTM1-215ENST00000514093 ADGRA2Q96PE1 1338 aa25.62■■□□□ 1.69
SQSTM1-215ENST00000514093 GJB1P08034 283 aa25.61■■□□□ 1.69
SQSTM1-215ENST00000514093 UBE2Q1Q7Z7E8 422 aa25.61■■□□□ 1.69
SQSTM1-215ENST00000514093 BICC1Q9H694 974 aaKnown RBP25.61■■□□□ 1.69
SQSTM1-215ENST00000514093 PDE8BO95263 885 aa25.6■■□□□ 1.69
SQSTM1-215ENST00000514093 PRKCZQ05513 592 aa25.6■■□□□ 1.69
SQSTM1-215ENST00000514093 TCP10Q12799 353 aa25.6■■□□□ 1.69
SQSTM1-215ENST00000514093 MOGSQ13724 837 aa25.6■■□□□ 1.69
SQSTM1-215ENST00000514093 WDR63Q8IWG1 891 aa25.6■■□□□ 1.69
SQSTM1-215ENST00000514093 KLHDC4Q8TBB5 520 aa25.6■■□□□ 1.69
SQSTM1-215ENST00000514093 HTATIP2Q9BUP3 242 aa25.6■■□□□ 1.69
SQSTM1-215ENST00000514093 HHIPL2Q6UWX4 724 aa25.59■■□□□ 1.69
SQSTM1-215ENST00000514093 VGLL2Q8N8G2 317 aa25.59■■□□□ 1.69
SQSTM1-215ENST00000514093 KCNH4Q9UQ05 1017 aa25.59■■□□□ 1.69
SQSTM1-215ENST00000514093 CYP2C8P10632 490 aa25.58■■□□□ 1.69
SQSTM1-215ENST00000514093 NCBP3Q53F19 620 aaKnown RBP25.58■■□□□ 1.69
SQSTM1-215ENST00000514093 FAM151AQ8WW52 585 aa25.58■■□□□ 1.69
SQSTM1-215ENST00000514093 PRO3102Q9H379 93 aa25.58■■□□□ 1.69
SQSTM1-215ENST00000514093 ZNF112Q9UJU3 913 aa25.58■■□□□ 1.69
SQSTM1-215ENST00000514093 GABRQQ9UN88 632 aa25.58■■□□□ 1.69
SQSTM1-215ENST00000514093 MAST3O60307 1309 aa25.58■■□□□ 1.69
SQSTM1-215ENST00000514093 RPAP1Q9BWH6 1393 aaPredicted RBP25.57■■□□□ 1.68
SQSTM1-215ENST00000514093 UBXN2AP68543 259 aa25.57■■□□□ 1.68
SQSTM1-215ENST00000514093 ANKRD44Q8N8A2 993 aa25.57■■□□□ 1.68
SQSTM1-215ENST00000514093 U2AF1L4Q8WU68 220 aaKnown RBP25.57■■□□□ 1.68
SQSTM1-215ENST00000514093 UNC93B1Q9H1C4 597 aa25.57■■□□□ 1.68
SQSTM1-215ENST00000514093 NFIAQ12857 509 aa25.56■■□□□ 1.68
SQSTM1-215ENST00000514093 GPAT2Q6NUI2 795 aa25.56■■□□□ 1.68
SQSTM1-215ENST00000514093 SUGT1Q9Y2Z0 365 aa25.56■■□□□ 1.68
SQSTM1-215ENST00000514093 NR2E3Q9Y5X4 410 aa25.56■■□□□ 1.68
SQSTM1-215ENST00000514093 FARP2O94887 1054 aaPredicted RBP25.55■■□□□ 1.68
SQSTM1-215ENST00000514093 BCRP11274 1271 aa25.55■■□□□ 1.68
SQSTM1-215ENST00000514093 FCGRTP55899 365 aa25.55■■□□□ 1.68
SQSTM1-215ENST00000514093 RABL6Q3YEC7 729 aaPredicted RBP25.55■■□□□ 1.68
SQSTM1-215ENST00000514093 CDC42EP5Q6NZY7 148 aa25.55■■□□□ 1.68
SQSTM1-215ENST00000514093 SLC17A8Q8NDX2 589 aa25.55■■□□□ 1.68
SQSTM1-215ENST00000514093 ZBTB7BO15156 539 aaPredicted RBP25.54■■□□□ 1.68
SQSTM1-215ENST00000514093 DIXDC1Q155Q3 683 aa25.54■■□□□ 1.68
SQSTM1-215ENST00000514093 PARK7Q99497 189 aaKnown RBP25.54■■□□□ 1.68
SQSTM1-215ENST00000514093 UTYO14607 1347 aa25.54■■□□□ 1.68
SQSTM1-215ENST00000514093 DLL1O00548 723 aa25.53■■□□□ 1.68
SQSTM1-215ENST00000514093 ZFPM1Q8IX07 1006 aa25.53■■□□□ 1.68
SQSTM1-215ENST00000514093 DAGLAQ9Y4D2 1042 aa25.53■■□□□ 1.68
SQSTM1-215ENST00000514093 SGPL1O95470 568 aa25.52■■□□□ 1.68
SQSTM1-215ENST00000514093 IFIT1P09914 478 aaKnown RBP25.52■■□□□ 1.68
SQSTM1-215ENST00000514093 ELNP15502 786 aa25.52■■□□□ 1.68
SQSTM1-215ENST00000514093 FGFR2P21802 821 aa25.52■■□□□ 1.68
SQSTM1-215ENST00000514093 SLAIN1Q8ND83 568 aa25.52■■□□□ 1.68
SQSTM1-215ENST00000514093 FAM198AQ9UFP1 575 aa25.52■■□□□ 1.68
SQSTM1-215ENST00000514093 AK9Q5TCS8 1911 aa25.52■■□□□ 1.68
SQSTM1-215ENST00000514093 SOX1O00570 391 aaPredicted RBP25.51■■□□□ 1.67
SQSTM1-215ENST00000514093 ZEB1P37275 1124 aaPredicted RBP25.51■■□□□ 1.67
SQSTM1-215ENST00000514093 PUM3Q15397 648 aaKnown RBP25.51■■□□□ 1.67
SQSTM1-215ENST00000514093 NOL9Q5SY16 702 aaKnown RBP25.51■■□□□ 1.67
SQSTM1-215ENST00000514093 CXCL11O14625 94 aa25.5■■□□□ 1.67
SQSTM1-215ENST00000514093 ADCY3O60266 1144 aa25.5■■□□□ 1.67
SQSTM1-215ENST00000514093 WDR66Q8TBY9 1149 aa25.5■■□□□ 1.67
SQSTM1-215ENST00000514093 USP40Q9NVE5 1235 aa25.5■■□□□ 1.67
SQSTM1-215ENST00000514093 ZHX2Q9Y6X8 837 aa25.5■■□□□ 1.67
SQSTM1-215ENST00000514093 EVI5O60447 810 aa25.49■■□□□ 1.67
SQSTM1-215ENST00000514093 TFRCP02786 760 aaKnown RBP25.49■■□□□ 1.67
SQSTM1-215ENST00000514093 FLT3LGP49771 235 aa25.49■■□□□ 1.67
SQSTM1-215ENST00000514093 LRCH3Q96II8 777 aa25.49■■□□□ 1.67
SQSTM1-215ENST00000514093 MRS2Q9HD23 443 aa25.49■■□□□ 1.67
SQSTM1-215ENST00000514093 PRDX5P30044 214 aa25.48■■□□□ 1.67
SQSTM1-215ENST00000514093 GADL1Q6ZQY3 521 aa25.48■■□□□ 1.67
SQSTM1-215ENST00000514093 DEFB118Q96PH6 123 aa25.48■■□□□ 1.67
SQSTM1-215ENST00000514093 STAP2Q9UGK3 403 aa25.48■■□□□ 1.67
SQSTM1-215ENST00000514093 MGAMO43451 1857 aa25.48■■□□□ 1.67
SQSTM1-215ENST00000514093 KIF16BQ96L93 1317 aa25.47■■□□□ 1.67
SQSTM1-215ENST00000514093 INHAP05111 366 aa25.47■■□□□ 1.67
SQSTM1-215ENST00000514093 PHF20L1A8MW92 1017 aa25.46■■□□□ 1.67
SQSTM1-215ENST00000514093 SLURP2P0DP57 97 aa25.46■■□□□ 1.67
SQSTM1-215ENST00000514093 SLC5A1P13866 664 aa25.46■■□□□ 1.67
SQSTM1-215ENST00000514093 FASTKD5Q7L8L6 764 aaKnown RBP25.46■■□□□ 1.67
SQSTM1-215ENST00000514093 TAOK2Q9UL54 1235 aa25.46■■□□□ 1.67
SQSTM1-215ENST00000514093 A0A0G2JLL6 359 aaPredicted RBP25.45■■□□□ 1.66
SQSTM1-215ENST00000514093 PRRT2Q7Z6L0 340 aaPredicted RBP25.45■■□□□ 1.66
SQSTM1-215ENST00000514093 SCYL3Q8IZE3 742 aa25.45■■□□□ 1.66
SQSTM1-215ENST00000514093 LPIN2Q92539 896 aa25.45■■□□□ 1.66
SQSTM1-215ENST00000514093 EYA2O00167 538 aa25.44■■□□□ 1.66
SQSTM1-215ENST00000514093 TNPO2O14787 897 aaKnown RBP25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 220.8 ms