RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.02□□□□□ -0.81
NEDD4-210ENST00000513957 CNTNAP1P78357 1384 aa10.01□□□□□ -0.81
NEDD4-210ENST00000513957 MCAMP43121 646 aa10.01□□□□□ -0.81
NEDD4-210ENST00000513957 TNNI2P48788 182 aa10.01□□□□□ -0.81
NEDD4-210ENST00000513957 FXR2P51116 673 aaKnown RBP eCLIP10.01□□□□□ -0.81
NEDD4-210ENST00000513957 GSTO1P78417 241 aa10.01□□□□□ -0.81
NEDD4-210ENST00000513957 HDAC1Q13547 482 aaPredicted RBP10.01□□□□□ -0.81
NEDD4-210ENST00000513957 AACSQ86V21 672 aa10.01□□□□□ -0.81
NEDD4-210ENST00000513957 DZIP1Q86YF9 867 aaKnown RBP10.01□□□□□ -0.81
NEDD4-210ENST00000513957 EAF2Q96CJ1 260 aaPredicted RBP10.01□□□□□ -0.81
NEDD4-210ENST00000513957 KLRG1Q96E93 195 aa10.01□□□□□ -0.81
NEDD4-210ENST00000513957 FAM163AQ96GL9 167 aaPredicted RBP10.01□□□□□ -0.81
NEDD4-210ENST00000513957 CRBNQ96SW2 442 aa10.01□□□□□ -0.81
NEDD4-210ENST00000513957 ARID3AQ99856 593 aa10.01□□□□□ -0.81
NEDD4-210ENST00000513957 DBNDD2Q9BQY9 259 aa10.01□□□□□ -0.81
NEDD4-210ENST00000513957 TMOD2Q9NZR1 351 aa10.01□□□□□ -0.81
NEDD4-210ENST00000513957 HMG20BQ9P0W2 317 aa10.01□□□□□ -0.81
NEDD4-210ENST00000513957 TLL2Q9Y6L7 1015 aa10.01□□□□□ -0.81
NEDD4-210ENST00000513957 CDK5RAP2Q96SN8 1893 aa10.01□□□□□ -0.81
NEDD4-210ENST00000513957 AK9Q5TCS8 1911 aa10□□□□□ -0.81
NEDD4-210ENST00000513957 CEP350Q5VT06 3117 aa10□□□□□ -0.81
NEDD4-210ENST00000513957 UNCXA6NJT0 531 aa10□□□□□ -0.81
NEDD4-210ENST00000513957 TRAF5O00463 557 aa10□□□□□ -0.81
NEDD4-210ENST00000513957 CELF2O95319 508 aaKnown RBP10□□□□□ -0.81
NEDD4-210ENST00000513957 IFIT2P09913 472 aaKnown RBP10□□□□□ -0.81
NEDD4-210ENST00000513957 PRDX5P30044 214 aa10□□□□□ -0.81
NEDD4-210ENST00000513957 E2F4Q16254 413 aa10□□□□□ -0.81
NEDD4-210ENST00000513957 USP48Q86UV5 1035 aa10□□□□□ -0.81
NEDD4-210ENST00000513957 FAM83AQ86UY5 434 aa10□□□□□ -0.81
NEDD4-210ENST00000513957 CERS3Q8IU89 383 aa10□□□□□ -0.81
NEDD4-210ENST00000513957 REM2Q8IYK8 340 aaPredicted RBP10□□□□□ -0.81
NEDD4-210ENST00000513957 C2orf69Q8N8R5 385 aa10□□□□□ -0.81
NEDD4-210ENST00000513957 HOOK2Q96ED9 719 aa10□□□□□ -0.81
NEDD4-210ENST00000513957 CDCA5Q96FF9 252 aa10□□□□□ -0.81
NEDD4-210ENST00000513957 PRMT6Q96LA8 375 aaPredicted RBP10□□□□□ -0.81
NEDD4-210ENST00000513957 GAKO14976 1311 aa10□□□□□ -0.81
NEDD4-210ENST00000513957 OTOFQ9HC10 1997 aa9.99□□□□□ -0.81
NEDD4-210ENST00000513957 COL2A1P02458 1487 aaPredicted RBP9.99□□□□□ -0.81
NEDD4-210ENST00000513957 ADM5C9JUS6 153 aa9.99□□□□□ -0.81
NEDD4-210ENST00000513957 LDHCP07864 332 aa9.99□□□□□ -0.81
NEDD4-210ENST00000513957 PDIA4P13667 645 aaKnown RBP9.99□□□□□ -0.81
NEDD4-210ENST00000513957 ECE1P42892 770 aa9.99□□□□□ -0.81
NEDD4-210ENST00000513957 TTF1Q15361 905 aaPredicted RBP9.99□□□□□ -0.81
NEDD4-210ENST00000513957 SUPT20HL1Q3ZLR7 823 aa9.99□□□□□ -0.81
NEDD4-210ENST00000513957 CST9Q5W186 159 aa9.99□□□□□ -0.81
NEDD4-210ENST00000513957 APOBEC3HQ6NTF7 200 aaKnown RBP9.99□□□□□ -0.81
NEDD4-210ENST00000513957 SAPCD2Q86UD0 394 aa9.99□□□□□ -0.81
NEDD4-210ENST00000513957 DNAJC5GQ8N7S2 189 aa9.99□□□□□ -0.81
NEDD4-210ENST00000513957 GCC1Q96CN9 775 aa9.99□□□□□ -0.81
NEDD4-210ENST00000513957 GPATCH3Q96I76 525 aa9.99□□□□□ -0.81
NEDD4-210ENST00000513957 CCDC8Q9H0W5 538 aaPredicted RBP9.99□□□□□ -0.81
NEDD4-210ENST00000513957 DEFB129Q9H1M3 183 aa9.99□□□□□ -0.81
NEDD4-210ENST00000513957 GBA2Q9HCG7 927 aaPredicted RBP9.99□□□□□ -0.81
NEDD4-210ENST00000513957 ABCF2Q9UG63 623 aa9.99□□□□□ -0.81
NEDD4-210ENST00000513957 ABT1Q9ULW3 272 aaKnown RBP9.99□□□□□ -0.81
NEDD4-210ENST00000513957 MROH7-TTC4A0A0A0MT08 1334 aa9.99□□□□□ -0.81
NEDD4-210ENST00000513957 ASTN2O75129 1339 aaPredicted RBP9.99□□□□□ -0.81
NEDD4-210ENST00000513957 GRIK5Q16478 980 aa9.98□□□□□ -0.81
NEDD4-210ENST00000513957 DEFB115Q30KQ5 88 aa9.98□□□□□ -0.81
NEDD4-210ENST00000513957 JMYQ8N9B5 988 aa9.98□□□□□ -0.81
NEDD4-210ENST00000513957 NSUN4Q96CB9 384 aaKnown RBP9.98□□□□□ -0.81
NEDD4-210ENST00000513957 IL1RAPL2Q9NP60 686 aa9.98□□□□□ -0.81
NEDD4-210ENST00000513957 TLR7Q9NYK1 1049 aaKnown RBP9.98□□□□□ -0.81
NEDD4-210ENST00000513957 LRP2BPQ9P2M1 347 aa9.98□□□□□ -0.81
NEDD4-210ENST00000513957 ZNF70Q9UC06 446 aaPredicted RBP9.98□□□□□ -0.81
NEDD4-210ENST00000513957 DAGLAQ9Y4D2 1042 aa9.98□□□□□ -0.81
NEDD4-210ENST00000513957 SUPT16HQ9Y5B9 1047 aaKnown RBP9.98□□□□□ -0.81
NEDD4-210ENST00000513957 PCDHB15Q9Y5E8 787 aa9.98□□□□□ -0.81
NEDD4-210ENST00000513957 RFX7Q2KHR2 1363 aa9.98□□□□□ -0.81
NEDD4-210ENST00000513957 CLRN2A0PK11 232 aa9.97□□□□□ -0.81
NEDD4-210ENST00000513957 PPP1R12BO60237 982 aaPredicted RBP9.97□□□□□ -0.81
NEDD4-210ENST00000513957 PLCG2P16885 1265 aa9.97□□□□□ -0.81
NEDD4-210ENST00000513957 ATP5JP18859 108 aa9.97□□□□□ -0.81
NEDD4-210ENST00000513957 MECOMQ03112 1051 aa9.97□□□□□ -0.81
NEDD4-210ENST00000513957 MAP3K11Q16584 847 aa9.97□□□□□ -0.81
NEDD4-210ENST00000513957 RWDD1Q9H446 243 aaPredicted RBP9.97□□□□□ -0.81
NEDD4-210ENST00000513957 TDRD3Q9H7E2 651 aaKnown RBP9.97□□□□□ -0.81
NEDD4-210ENST00000513957 ZNF408Q9H9D4 720 aa9.97□□□□□ -0.81
NEDD4-210ENST00000513957 VEZTQ9HBM0 779 aa9.97□□□□□ -0.81
NEDD4-210ENST00000513957 GPR75-ASB3A0A0A6YYF3 556 aa9.96□□□□□ -0.82
NEDD4-210ENST00000513957 BAG3O95817 575 aa9.96□□□□□ -0.82
NEDD4-210ENST00000513957 CYP2E1P05181 493 aaPredicted RBP9.96□□□□□ -0.82
NEDD4-210ENST00000513957 ZAP70P43403 619 aa9.96□□□□□ -0.82
NEDD4-210ENST00000513957 MAP3K12Q12852 859 aa9.96□□□□□ -0.82
NEDD4-210ENST00000513957 RASA3Q14644 834 aa9.96□□□□□ -0.82
NEDD4-210ENST00000513957 DIXDC1Q155Q3 683 aa9.96□□□□□ -0.82
NEDD4-210ENST00000513957 PI16Q6UXB8 463 aa9.96□□□□□ -0.82
NEDD4-210ENST00000513957 ARMC9Q7Z3E5 817 aa9.96□□□□□ -0.82
NEDD4-210ENST00000513957 CCDC102AQ96A19 550 aa9.96□□□□□ -0.82
NEDD4-210ENST00000513957 NOL10Q9BSC4 688 aaKnown RBP9.96□□□□□ -0.82
NEDD4-210ENST00000513957 IDI2Q9BXS1 227 aa9.96□□□□□ -0.82
NEDD4-210ENST00000513957 RAI14Q9P0K7 980 aa9.96□□□□□ -0.82
NEDD4-210ENST00000513957 TTC41PQ6P2S7 1318 aa9.96□□□□□ -0.82
NEDD4-210ENST00000513957 SSC5DA1L4H1 1573 aa9.96□□□□□ -0.82
NEDD4-210ENST00000513957 MYH1P12882 1939 aa9.95□□□□□ -0.82
NEDD4-210ENST00000513957 APBB1O00213 710 aa9.95□□□□□ -0.82
NEDD4-210ENST00000513957 ENTPD3O75355 529 aa9.95□□□□□ -0.82
NEDD4-210ENST00000513957 MAP2K2P36507 400 aa9.95□□□□□ -0.82
NEDD4-210ENST00000513957 HUNKP57058 714 aa9.95□□□□□ -0.82
NEDD4-210ENST00000513957 NOGQ13253 232 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms