RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 FKBP5Q13451 457 aaPredicted RBP13.35□□□□□ -0.27
CLDND1-227ENST00000513452 DCAF15Q66K64 600 aa13.35□□□□□ -0.27
CLDND1-227ENST00000513452 LMBR1LQ6UX01 489 aa13.35□□□□□ -0.27
CLDND1-227ENST00000513452 Q7L0L9 218 aa13.35□□□□□ -0.27
CLDND1-227ENST00000513452 MIGA2Q7L4E1 593 aa13.35□□□□□ -0.27
CLDND1-227ENST00000513452 TEKT1Q969V4 418 aa13.35□□□□□ -0.27
CLDND1-227ENST00000513452 PARK7Q99497 189 aaKnown RBP13.35□□□□□ -0.27
CLDND1-227ENST00000513452 IQSEC3Q9UPP2 1182 aaPredicted RBP13.35□□□□□ -0.27
CLDND1-227ENST00000513452 RPAP1Q9BWH6 1393 aaPredicted RBP13.34□□□□□ -0.27
CLDND1-227ENST00000513452 ADCY3O60266 1144 aa13.34□□□□□ -0.27
CLDND1-227ENST00000513452 TFRCP02786 760 aaKnown RBP13.34□□□□□ -0.27
CLDND1-227ENST00000513452 INHAP05111 366 aa13.34□□□□□ -0.27
CLDND1-227ENST00000513452 CHAF1AQ13111 956 aaPredicted RBP13.34□□□□□ -0.27
CLDND1-227ENST00000513452 CCDC57Q2TAC2 916 aa13.34□□□□□ -0.27
CLDND1-227ENST00000513452 TWISTNBQ3B726 338 aaPredicted RBP13.34□□□□□ -0.27
CLDND1-227ENST00000513452 FAM84BQ96KN1 310 aaPredicted RBP13.34□□□□□ -0.27
CLDND1-227ENST00000513452 DEFB118Q96PH6 123 aa13.34□□□□□ -0.27
CLDND1-227ENST00000513452 ZNF341Q9BYN7 854 aa13.34□□□□□ -0.27
CLDND1-227ENST00000513452 KCNH4Q9UQ05 1017 aa13.34□□□□□ -0.27
CLDND1-227ENST00000513452 CYP2C8P10632 490 aa13.33□□□□□ -0.28
CLDND1-227ENST00000513452 BCRP11274 1271 aa13.33□□□□□ -0.28
CLDND1-227ENST00000513452 MOGSQ13724 837 aa13.33□□□□□ -0.28
CLDND1-227ENST00000513452 UBE4AQ14139 1066 aa13.33□□□□□ -0.28
CLDND1-227ENST00000513452 EPHA10Q5JZY3 1008 aa13.33□□□□□ -0.28
CLDND1-227ENST00000513452 GPR153Q6NV75 609 aa13.33□□□□□ -0.28
CLDND1-227ENST00000513452 FAM83AQ86UY5 434 aa13.33□□□□□ -0.28
CLDND1-227ENST00000513452 GDF15Q99988 308 aa13.33□□□□□ -0.28
CLDND1-227ENST00000513452 ZMYND8Q9ULU4 1186 aaPredicted RBP13.33□□□□□ -0.28
CLDND1-227ENST00000513452 STXBP5LQ9Y2K9 1186 aa13.33□□□□□ -0.28
CLDND1-227ENST00000513452 FLT3LGP49771 235 aa13.32□□□□□ -0.28
CLDND1-227ENST00000513452 HDLBPQ00341 1268 aaKnown RBP13.32□□□□□ -0.28
CLDND1-227ENST00000513452 VPS37DQ86XT2 251 aa13.32□□□□□ -0.28
CLDND1-227ENST00000513452 C7orf61Q8IZ16 206 aa13.32□□□□□ -0.28
CLDND1-227ENST00000513452 DIS3LQ8TF46 1054 aaKnown RBP13.32□□□□□ -0.28
CLDND1-227ENST00000513452 PAWRQ96IZ0 340 aaKnown RBP13.32□□□□□ -0.28
CLDND1-227ENST00000513452 ZDHHC15Q96MV8 337 aa13.32□□□□□ -0.28
CLDND1-227ENST00000513452 COL25A1Q9BXS0 654 aaPredicted RBP13.32□□□□□ -0.28
CLDND1-227ENST00000513452 ALPK3Q96L96 1907 aa13.32□□□□□ -0.28
CLDND1-227ENST00000513452 FRAT2O75474 233 aaPredicted RBP13.31□□□□□ -0.28
CLDND1-227ENST00000513452 BMP8BP34820 402 aa13.31□□□□□ -0.28
CLDND1-227ENST00000513452 FKBP1CQ5VVH2 108 aa13.31□□□□□ -0.28
CLDND1-227ENST00000513452 APOBEC3HQ6NTF7 200 aaKnown RBP13.31□□□□□ -0.28
CLDND1-227ENST00000513452 TBC1D22AQ8WUA7 517 aa13.31□□□□□ -0.28
CLDND1-227ENST00000513452 TAOK2Q9UL54 1235 aa13.31□□□□□ -0.28
CLDND1-227ENST00000513452 MGAMO43451 1857 aa13.31□□□□□ -0.28
CLDND1-227ENST00000513452 BCAMP50895 628 aa13.3□□□□□ -0.28
CLDND1-227ENST00000513452 GPAT2Q6NUI2 795 aa13.3□□□□□ -0.28
CLDND1-227ENST00000513452 PUS3Q9BZE2 481 aaKnown RBP13.3□□□□□ -0.28
CLDND1-227ENST00000513452 CRISPLD2Q9H0B8 497 aa13.3□□□□□ -0.28
CLDND1-227ENST00000513452 PAK6Q9NQU5 681 aaPredicted RBP13.3□□□□□ -0.28
CLDND1-227ENST00000513452 MTMR10Q9NXD2 777 aa13.3□□□□□ -0.28
CLDND1-227ENST00000513452 F6X3S4 739 aa13.29□□□□□ -0.28
CLDND1-227ENST00000513452 TNPO2O14787 897 aaKnown RBP13.29□□□□□ -0.28
CLDND1-227ENST00000513452 SYN1P17600 705 aa13.29□□□□□ -0.28
CLDND1-227ENST00000513452 CAPN2P17655 700 aa13.29□□□□□ -0.28
CLDND1-227ENST00000513452 TCP10Q12799 353 aa13.29□□□□□ -0.28
CLDND1-227ENST00000513452 NECAB2Q7Z6G3 386 aa13.29□□□□□ -0.28
CLDND1-227ENST00000513452 FBXO33Q7Z6M2 555 aa13.29□□□□□ -0.28
CLDND1-227ENST00000513452 PXYLP1Q8TE99 480 aa13.29□□□□□ -0.28
CLDND1-227ENST00000513452 ZNF112Q9UJU3 913 aa13.29□□□□□ -0.28
CLDND1-227ENST00000513452 MAST3O60307 1309 aa13.29□□□□□ -0.28
CLDND1-227ENST00000513452 MAGEA10P43363 369 aaPredicted RBP13.28□□□□□ -0.28
CLDND1-227ENST00000513452 IRF5Q13568 498 aa13.28□□□□□ -0.28
CLDND1-227ENST00000513452 LRIT3Q3SXY7 679 aa13.28□□□□□ -0.28
CLDND1-227ENST00000513452 NOL9Q5SY16 702 aaKnown RBP13.28□□□□□ -0.28
CLDND1-227ENST00000513452 BEND3Q5T5X7 828 aa13.28□□□□□ -0.28
CLDND1-227ENST00000513452 TDHQ8IZJ6 230 aa13.28□□□□□ -0.28
CLDND1-227ENST00000513452 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.28□□□□□ -0.28
CLDND1-227ENST00000513452 UNC80Q8N2C7 3258 aa13.28□□□□□ -0.28
CLDND1-227ENST00000513452 GRM8O00222 908 aa13.27□□□□□ -0.29
CLDND1-227ENST00000513452 CAVIN4Q5BKX8 364 aa13.27□□□□□ -0.29
CLDND1-227ENST00000513452 PPP4R3CPQ6ZMV5 832 aa13.27□□□□□ -0.29
CLDND1-227ENST00000513452 GADL1Q6ZQY3 521 aa13.27□□□□□ -0.29
CLDND1-227ENST00000513452 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.27□□□□□ -0.29
CLDND1-227ENST00000513452 SMCR8Q8TEV9 937 aaPredicted RBP13.27□□□□□ -0.29
CLDND1-227ENST00000513452 FAM151AQ8WW52 585 aa13.27□□□□□ -0.29
CLDND1-227ENST00000513452 MROH5Q6ZUA9 1318 aa13.27□□□□□ -0.29
CLDND1-227ENST00000513452 A0A0G2JLL6 359 aaPredicted RBP13.26□□□□□ -0.29
CLDND1-227ENST00000513452 CXCL11O14625 94 aa13.26□□□□□ -0.29
CLDND1-227ENST00000513452 DDX10Q13206 875 aaKnown RBP13.26□□□□□ -0.29
CLDND1-227ENST00000513452 HHIPL2Q6UWX4 724 aa13.26□□□□□ -0.29
CLDND1-227ENST00000513452 PRRT2Q7Z6L0 340 aaPredicted RBP13.26□□□□□ -0.29
CLDND1-227ENST00000513452 MRIQ9BWK5 157 aa13.26□□□□□ -0.29
CLDND1-227ENST00000513452 NFIAQ12857 509 aa13.25□□□□□ -0.29
CLDND1-227ENST00000513452 METTL24Q5JXM2 366 aa13.25□□□□□ -0.29
CLDND1-227ENST00000513452 FASTKD5Q7L8L6 764 aaKnown RBP13.25□□□□□ -0.29
CLDND1-227ENST00000513452 ANKLE1Q8NAG6 615 aa13.25□□□□□ -0.29
CLDND1-227ENST00000513452 COA7Q96BR5 231 aa13.25□□□□□ -0.29
CLDND1-227ENST00000513452 UBE2OQ9C0C9 1292 aaKnown RBP13.25□□□□□ -0.29
CLDND1-227ENST00000513452 PICK1Q9NRD5 415 aa13.25□□□□□ -0.29
CLDND1-227ENST00000513452 C9orf78Q9NZ63 289 aaPredicted RBP13.25□□□□□ -0.29
CLDND1-227ENST00000513452 SUGT1Q9Y2Z0 365 aa13.25□□□□□ -0.29
CLDND1-227ENST00000513452 ZHX2Q9Y6X8 837 aa13.25□□□□□ -0.29
CLDND1-227ENST00000513452 LRRC24Q50LG9 513 aa13.24□□□□□ -0.29
CLDND1-227ENST00000513452 CDC42EP5Q6NZY7 148 aa13.24□□□□□ -0.29
CLDND1-227ENST00000513452 SCYL3Q8IZE3 742 aa13.24□□□□□ -0.29
CLDND1-227ENST00000513452 SUCLG2Q96I99 432 aa13.24□□□□□ -0.29
CLDND1-227ENST00000513452 NBPF3Q9H094 633 aa13.24□□□□□ -0.29
CLDND1-227ENST00000513452 DAGLAQ9Y4D2 1042 aa13.24□□□□□ -0.29
CLDND1-227ENST00000513452 DDX60LQ5H9U9 1706 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms