RNA–Protein interactions for RNA: ENST00000513243.5

DDR1-272, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-272ENST00000513243 AACSQ86V21 672 aa21.77■■□□□ 1.08
DDR1-272ENST00000513243 RASAL3Q86YV0 1011 aa21.77■■□□□ 1.08
DDR1-272ENST00000513243 AIDAQ96BJ3 306 aa21.77■■□□□ 1.08
DDR1-272ENST00000513243 KIF1BPQ96EK5 621 aa21.77■■□□□ 1.08
DDR1-272ENST00000513243 GAKO14976 1311 aa21.77■■□□□ 1.07
DDR1-272ENST00000513243 PPP1R12BO60237 982 aaPredicted RBP21.76■■□□□ 1.07
DDR1-272ENST00000513243 MECOMQ03112 1051 aa21.76■■□□□ 1.07
DDR1-272ENST00000513243 MAP3K11Q16584 847 aa21.76■■□□□ 1.07
DDR1-272ENST00000513243 FAM83AQ86UY5 434 aa21.76■■□□□ 1.07
DDR1-272ENST00000513243 ZNF384Q8TF68 577 aa21.76■■□□□ 1.07
DDR1-272ENST00000513243 FAM163AQ96GL9 167 aaPredicted RBP21.76■■□□□ 1.07
DDR1-272ENST00000513243 RAB11FIP3O75154 756 aa21.75■■□□□ 1.07
DDR1-272ENST00000513243 USP2O75604 605 aaPredicted RBP21.75■■□□□ 1.07
DDR1-272ENST00000513243 KIF23Q02241 960 aaPredicted RBP21.75■■□□□ 1.07
DDR1-272ENST00000513243 USP40Q9NVE5 1235 aa21.75■■□□□ 1.07
DDR1-272ENST00000513243 SLF2Q8IX21 1173 aa21.74■■□□□ 1.07
DDR1-272ENST00000513243 NSUN4Q96CB9 384 aaKnown RBP21.74■■□□□ 1.07
DDR1-272ENST00000513243 RAI14Q9P0K7 980 aa21.74■■□□□ 1.07
DDR1-272ENST00000513243 CYP2E1P05181 493 aaPredicted RBP21.73■■□□□ 1.07
DDR1-272ENST00000513243 ZAP70P43403 619 aa21.73■■□□□ 1.07
DDR1-272ENST00000513243 NFIAQ12857 509 aa21.73■■□□□ 1.07
DDR1-272ENST00000513243 CLASRPQ8N2M8 674 aaKnown RBP21.73■■□□□ 1.07
DDR1-272ENST00000513243 BEGAINQ9BUH8 593 aa21.73■■□□□ 1.07
DDR1-272ENST00000513243 LRP2BPQ9P2M1 347 aa21.73■■□□□ 1.07
DDR1-272ENST00000513243 MROH7-TTC4A0A0A0MT08 1334 aa21.73■■□□□ 1.07
DDR1-272ENST00000513243 AKAP11Q9UKA4 1901 aa21.72■■□□□ 1.07
DDR1-272ENST00000513243 MYH2Q9UKX2 1941 aa21.72■■□□□ 1.07
DDR1-272ENST00000513243 CTCFP49711 727 aaPredicted RBP21.72■■□□□ 1.07
DDR1-272ENST00000513243 CLMNQ96JQ2 1002 aa21.72■■□□□ 1.07
DDR1-272ENST00000513243 FAM198AQ9UFP1 575 aa21.72■■□□□ 1.07
DDR1-272ENST00000513243 GPR75-ASB3A0A0A6YYF3 556 aa21.71■■□□□ 1.07
DDR1-272ENST00000513243 BTDP43251 543 aa21.71■■□□□ 1.07
DDR1-272ENST00000513243 IREB2P48200 963 aaKnown RBP21.71■■□□□ 1.07
DDR1-272ENST00000513243 GSTO1P78417 241 aa21.71■■□□□ 1.07
DDR1-272ENST00000513243 TCP10Q12799 353 aa21.71■■□□□ 1.07
DDR1-272ENST00000513243 FAM151AQ8WW52 585 aa21.71■■□□□ 1.07
DDR1-272ENST00000513243 CSRNP1Q96S65 589 aa21.71■■□□□ 1.07
DDR1-272ENST00000513243 CRBNQ96SW2 442 aa21.71■■□□□ 1.07
DDR1-272ENST00000513243 BCL11AQ9H165 835 aa21.71■■□□□ 1.07
DDR1-272ENST00000513243 PCDHB15Q9Y5E8 787 aa21.71■■□□□ 1.07
DDR1-272ENST00000513243 LDHCP07864 332 aa21.7■■□□□ 1.06
DDR1-272ENST00000513243 COL13A1Q5TAT6 717 aaPredicted RBP21.7■■□□□ 1.06
DDR1-272ENST00000513243 SLC10A4Q96EP9 437 aa21.7■■□□□ 1.06
DDR1-272ENST00000513243 PIH1D3Q9NQM4 214 aaKnown RBP21.7■■□□□ 1.06
DDR1-272ENST00000513243 UNCXA6NJT0 531 aa21.69■■□□□ 1.06
DDR1-272ENST00000513243 IFIT2P09913 472 aaKnown RBP21.69■■□□□ 1.06
DDR1-272ENST00000513243 HSPA8P11142 646 aaKnown RBP21.69■■□□□ 1.06
DDR1-272ENST00000513243 LBX1P52954 281 aa21.69■■□□□ 1.06
DDR1-272ENST00000513243 MKRN3Q13064 507 aaKnown RBP21.69■■□□□ 1.06
DDR1-272ENST00000513243 ZFPM1Q8IX07 1006 aa21.69■■□□□ 1.06
DDR1-272ENST00000513243 IDI2Q9BXS1 227 aa21.69■■□□□ 1.06
DDR1-272ENST00000513243 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.69■■□□□ 1.06
DDR1-272ENST00000513243 NDUFB9Q9Y6M9 179 aa21.69■■□□□ 1.06
DDR1-272ENST00000513243 RPAP1Q9BWH6 1393 aaPredicted RBP21.69■■□□□ 1.06
DDR1-272ENST00000513243 RGS3P49796 1198 aa21.68■■□□□ 1.06
DDR1-272ENST00000513243 RHBDL3P58872 404 aa21.68■■□□□ 1.06
DDR1-272ENST00000513243 ANKRD13AQ8IZ07 590 aa21.68■■□□□ 1.06
DDR1-272ENST00000513243 DCTPP1Q9H773 170 aa21.68■■□□□ 1.06
DDR1-272ENST00000513243 TSKSQ9UJT2 592 aa21.68■■□□□ 1.06
DDR1-272ENST00000513243 RFX7Q2KHR2 1363 aa21.67■■□□□ 1.06
DDR1-272ENST00000513243 CA12O43570 354 aa21.67■■□□□ 1.06
DDR1-272ENST00000513243 WDHD1O75717 1129 aaPredicted RBP21.67■■□□□ 1.06
DDR1-272ENST00000513243 SPRYD7Q5W111 196 aa21.67■■□□□ 1.06
DDR1-272ENST00000513243 NAA16Q6N069 864 aaPredicted RBP21.67■■□□□ 1.06
DDR1-272ENST00000513243 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.67■■□□□ 1.06
DDR1-272ENST00000513243 LRRCC1Q9C099 1032 aa21.67■■□□□ 1.06
DDR1-272ENST00000513243 SMARCA5O60264 1052 aaPredicted RBP21.66■■□□□ 1.06
DDR1-272ENST00000513243 ENTPD3O75355 529 aa21.66■■□□□ 1.06
DDR1-272ENST00000513243 MAP3K9P80192 1104 aa21.66■■□□□ 1.06
DDR1-272ENST00000513243 MIGA2Q7L4E1 593 aa21.66■■□□□ 1.06
DDR1-272ENST00000513243 REM2Q8IYK8 340 aaPredicted RBP21.66■■□□□ 1.06
DDR1-272ENST00000513243 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.66■■□□□ 1.06
DDR1-272ENST00000513243 HOOK2Q96ED9 719 aa21.66■■□□□ 1.06
DDR1-272ENST00000513243 ANTXR1Q9H6X2 564 aa21.66■■□□□ 1.06
DDR1-272ENST00000513243 DDX4Q9NQI0 724 aaKnown RBP21.66■■□□□ 1.06
DDR1-272ENST00000513243 PRDM10Q9NQV6 1147 aa21.66■■□□□ 1.06
DDR1-272ENST00000513243 IGSF3O75054 1194 aa21.65■■□□□ 1.06
DDR1-272ENST00000513243 ADGRA1Q86SQ6 560 aa21.65■■□□□ 1.06
DDR1-272ENST00000513243 WNK4Q96J92 1243 aa21.65■■□□□ 1.06
DDR1-272ENST00000513243 IDH1O75874 414 aaKnown RBP21.64■■□□□ 1.05
DDR1-272ENST00000513243 VGLL4Q14135 290 aa21.64■■□□□ 1.05
DDR1-272ENST00000513243 DCAF15Q66K64 600 aa21.64■■□□□ 1.05
DDR1-272ENST00000513243 SH3BP5LQ7L8J4 393 aa21.64■■□□□ 1.05
DDR1-272ENST00000513243 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.64■■□□□ 1.05
DDR1-272ENST00000513243 ELP3Q9H9T3 547 aa21.64■■□□□ 1.05
DDR1-272ENST00000513243 RNF186Q9NXI6 227 aa21.64■■□□□ 1.05
DDR1-272ENST00000513243 MYO5AQ9Y4I1 1855 aaKnown RBP21.63■■□□□ 1.05
DDR1-272ENST00000513243 MAP4K4O95819 1239 aaPredicted RBP21.63■■□□□ 1.05
DDR1-272ENST00000513243 ZBTB48P10074 688 aaPredicted RBP21.63■■□□□ 1.05
DDR1-272ENST00000513243 GJA5P36382 358 aa21.63■■□□□ 1.05
DDR1-272ENST00000513243 TM4SF4P48230 202 aa21.63■■□□□ 1.05
DDR1-272ENST00000513243 PICALMQ13492 652 aa21.63■■□□□ 1.05
DDR1-272ENST00000513243 OTOFQ9HC10 1997 aa21.62■■□□□ 1.05
DDR1-272ENST00000513243 NPM3O75607 178 aaKnown RBP21.62■■□□□ 1.05
DDR1-272ENST00000513243 TRPA1O75762 1119 aa21.62■■□□□ 1.05
DDR1-272ENST00000513243 PPP4CP60510 307 aa21.62■■□□□ 1.05
DDR1-272ENST00000513243 SH3RF3Q8TEJ3 882 aaPredicted RBP21.62■■□□□ 1.05
DDR1-272ENST00000513243 WRNIP1Q96S55 665 aa21.62■■□□□ 1.05
DDR1-272ENST00000513243 NOL10Q9BSC4 688 aaKnown RBP21.62■■□□□ 1.05
DDR1-272ENST00000513243 ZNF341Q9BYN7 854 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms