RNA–Protein interactions for RNA: ENST00000513048.5

DHFR-206, Transcript of dihydrofolate reductase, humanhuman

TSL 1 (best)

Gene DHFR, Length 994 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-206ENST00000513048 FGAP02671 866 aa11.18□□□□□ -0.62
DHFR-206ENST00000513048 PRELPP51888 382 aa11.18□□□□□ -0.62
DHFR-206ENST00000513048 PPP4CP60510 307 aa11.18□□□□□ -0.62
DHFR-206ENST00000513048 DYNLL1P63167 89 aaKnown RBP11.18□□□□□ -0.62
DHFR-206ENST00000513048 COL9A3Q14050 684 aaPredicted RBP11.18□□□□□ -0.62
DHFR-206ENST00000513048 DIXDC1Q155Q3 683 aa11.18□□□□□ -0.62
DHFR-206ENST00000513048 ADCK5Q3MIX3 580 aa11.18□□□□□ -0.62
DHFR-206ENST00000513048 STRIP1Q5VSL9 837 aa11.18□□□□□ -0.62
DHFR-206ENST00000513048 TTLL5Q6EMB2 1281 aa11.18□□□□□ -0.62
DHFR-206ENST00000513048 DZIP1Q86YF9 867 aaKnown RBP11.18□□□□□ -0.62
DHFR-206ENST00000513048 AIDAQ96BJ3 306 aa11.18□□□□□ -0.62
DHFR-206ENST00000513048 DDRGK1Q96HY6 314 aa11.18□□□□□ -0.62
DHFR-206ENST00000513048 TBC1D2Q9BYX2 928 aa11.18□□□□□ -0.62
DHFR-206ENST00000513048 TM6SF1Q9BZW5 370 aa11.18□□□□□ -0.62
DHFR-206ENST00000513048 FHDC1Q9C0D6 1143 aaPredicted RBP11.18□□□□□ -0.62
DHFR-206ENST00000513048 CDK5RAP2Q96SN8 1893 aa11.17□□□□□ -0.62
DHFR-206ENST00000513048 MROH7-TTC4A0A0A0MT08 1334 aa11.17□□□□□ -0.62
DHFR-206ENST00000513048 GNAT2P19087 354 aa11.17□□□□□ -0.62
DHFR-206ENST00000513048 IARSP41252 1262 aaKnown RBP11.17□□□□□ -0.62
DHFR-206ENST00000513048 GSTO1P78417 241 aa11.17□□□□□ -0.62
DHFR-206ENST00000513048 STOX1Q6ZVD7 989 aa11.17□□□□□ -0.62
DHFR-206ENST00000513048 NBPF3Q9H094 633 aa11.17□□□□□ -0.62
DHFR-206ENST00000513048 TAOK3Q9H2K8 898 aa11.17□□□□□ -0.62
DHFR-206ENST00000513048 BCS1LQ9Y276 419 aa11.17□□□□□ -0.62
DHFR-206ENST00000513048 ADAMTSL1Q8N6G6 1762 aa11.17□□□□□ -0.62
DHFR-206ENST00000513048 TIAM2Q8IVF5 1701 aa11.17□□□□□ -0.62
DHFR-206ENST00000513048 GPR75-ASB3A0A0A6YYF3 556 aa11.16□□□□□ -0.62
DHFR-206ENST00000513048 USP17L3A6NCW0 530 aa11.16□□□□□ -0.62
DHFR-206ENST00000513048 USP17L4A6NCW7 530 aa11.16□□□□□ -0.62
DHFR-206ENST00000513048 G3V3G9 751 aa11.16□□□□□ -0.62
DHFR-206ENST00000513048 LDHCP07864 332 aa11.16□□□□□ -0.62
DHFR-206ENST00000513048 DCAF8Q5TAQ9 597 aa11.16□□□□□ -0.62
DHFR-206ENST00000513048 RNF20Q5VTR2 975 aa11.16□□□□□ -0.62
DHFR-206ENST00000513048 USP17L1Q7RTZ2 530 aa11.16□□□□□ -0.62
DHFR-206ENST00000513048 IFNL3Q8IZI9 196 aa11.16□□□□□ -0.62
DHFR-206ENST00000513048 LARGE2Q8N3Y3 721 aa11.16□□□□□ -0.62
DHFR-206ENST00000513048 TTC14Q96N46 770 aa11.16□□□□□ -0.62
DHFR-206ENST00000513048 ZSWIM6Q9HCJ5 1215 aa11.16□□□□□ -0.62
DHFR-206ENST00000513048 CTNNA3Q9UI47 895 aa11.16□□□□□ -0.62
DHFR-206ENST00000513048 FARP1Q9Y4F1 1045 aaPredicted RBP11.16□□□□□ -0.62
DHFR-206ENST00000513048 SLC4A4Q9Y6R1 1079 aa11.16□□□□□ -0.62
DHFR-206ENST00000513048 FOCADQ5VW36 1801 aa11.15□□□□□ -0.62
DHFR-206ENST00000513048 ZKSCAN1P17029 563 aaPredicted RBP11.15□□□□□ -0.62
DHFR-206ENST00000513048 JAKMIP1Q96N16 626 aaKnown RBP11.15□□□□□ -0.62
DHFR-206ENST00000513048 GMLQ99445 158 aa11.15□□□□□ -0.62
DHFR-206ENST00000513048 SYT17Q9BSW7 474 aa11.15□□□□□ -0.62
DHFR-206ENST00000513048 MRIQ9BWK5 157 aa11.15□□□□□ -0.62
DHFR-206ENST00000513048 UPF3BQ9BZI7 483 aaKnown RBP11.15□□□□□ -0.62
DHFR-206ENST00000513048 AATFQ9NY61 560 aaKnown RBP eCLIP11.15□□□□□ -0.62
DHFR-206ENST00000513048 MKRN1Q9UHC7 482 aaKnown RBP11.15□□□□□ -0.62
DHFR-206ENST00000513048 DAGLAQ9Y4D2 1042 aa11.15□□□□□ -0.62
DHFR-206ENST00000513048 TACC3Q9Y6A5 838 aa11.15□□□□□ -0.62
DHFR-206ENST00000513048 BAZ2AQ9UIF9 1905 aaKnown RBP11.15□□□□□ -0.62
DHFR-206ENST00000513048 DDX60LQ5H9U9 1706 aaKnown RBP11.15□□□□□ -0.63
DHFR-206ENST00000513048 VIL1P09327 827 aaKnown RBP11.14□□□□□ -0.63
DHFR-206ENST00000513048 CPA1P15085 419 aa11.14□□□□□ -0.63
DHFR-206ENST00000513048 BTDP43251 543 aa11.14□□□□□ -0.63
DHFR-206ENST00000513048 NEK4P51957 841 aa11.14□□□□□ -0.63
DHFR-206ENST00000513048 RHBDL3P58872 404 aa11.14□□□□□ -0.63
DHFR-206ENST00000513048 RASSF7Q02833 373 aa11.14□□□□□ -0.63
DHFR-206ENST00000513048 KRT32Q14532 448 aa11.14□□□□□ -0.63
DHFR-206ENST00000513048 GIMAP6Q6P9H5 292 aa11.14□□□□□ -0.63
DHFR-206ENST00000513048 HHIPL2Q6UWX4 724 aa11.14□□□□□ -0.63
DHFR-206ENST00000513048 IL27Q8NEV9 243 aa11.14□□□□□ -0.63
DHFR-206ENST00000513048 SH3RF3Q8TEJ3 882 aaPredicted RBP11.14□□□□□ -0.63
DHFR-206ENST00000513048 SDR42E1Q8WUS8 393 aa11.14□□□□□ -0.63
DHFR-206ENST00000513048 FBXW7Q969H0 707 aa11.14□□□□□ -0.63
DHFR-206ENST00000513048 ZNRF3Q9ULT6 936 aa11.14□□□□□ -0.63
DHFR-206ENST00000513048 TTF2Q9UNY4 1162 aaKnown RBP11.14□□□□□ -0.63
DHFR-206ENST00000513048 LAMB1P07942 1786 aa11.13□□□□□ -0.63
DHFR-206ENST00000513048 E7EWF7 191 aa11.13□□□□□ -0.63
DHFR-206ENST00000513048 APPP05067 770 aa11.13□□□□□ -0.63
DHFR-206ENST00000513048 CASTP20810 708 aaKnown RBP11.13□□□□□ -0.63
DHFR-206ENST00000513048 SLC4A3P48751 1232 aa11.13□□□□□ -0.63
DHFR-206ENST00000513048 HAND2P61296 217 aa11.13□□□□□ -0.63
DHFR-206ENST00000513048 HDLBPQ00341 1268 aaKnown RBP11.13□□□□□ -0.63
DHFR-206ENST00000513048 IMMTQ16891 758 aaKnown RBP11.13□□□□□ -0.63
DHFR-206ENST00000513048 RUFY3Q7L099 469 aa11.13□□□□□ -0.63
DHFR-206ENST00000513048 TBC1D10CQ8IV04 446 aa11.13□□□□□ -0.63
DHFR-206ENST00000513048 SLF2Q8IX21 1173 aa11.13□□□□□ -0.63
DHFR-206ENST00000513048 NIM1KQ8IY84 436 aa11.13□□□□□ -0.63
DHFR-206ENST00000513048 NKX2-3Q8TAU0 364 aa11.13□□□□□ -0.63
DHFR-206ENST00000513048 CRNKL1Q9BZJ0 848 aaKnown RBP11.13□□□□□ -0.63
DHFR-206ENST00000513048 ALDH8A1Q9H2A2 487 aaPredicted RBP11.13□□□□□ -0.63
DHFR-206ENST00000513048 DCP1AQ9NPI6 582 aaPredicted RBP11.13□□□□□ -0.63
DHFR-206ENST00000513048 DICER1Q9UPY3 1922 aaKnown RBP11.13□□□□□ -0.63
DHFR-206ENST00000513048 SBF1O95248 1867 aa11.12□□□□□ -0.63
DHFR-206ENST00000513048 NAV1Q8NEY1 1877 aa11.12□□□□□ -0.63
DHFR-206ENST00000513048 ECM29Q5VYK3 1845 aa11.12□□□□□ -0.63
DHFR-206ENST00000513048 F8W031 263 aaPredicted RBP11.12□□□□□ -0.63
DHFR-206ENST00000513048 SMIM22K7EJ46 135 aa11.12□□□□□ -0.63
DHFR-206ENST00000513048 PSMD14O00487 310 aa11.12□□□□□ -0.63
DHFR-206ENST00000513048 ZNF213O14771 459 aa11.12□□□□□ -0.63
DHFR-206ENST00000513048 RAD17O75943 681 aa11.12□□□□□ -0.63
DHFR-206ENST00000513048 BAG3O95817 575 aa11.12□□□□□ -0.63
DHFR-206ENST00000513048 RPS6KB1P23443 525 aa11.12□□□□□ -0.63
DHFR-206ENST00000513048 PSMA5P28066 241 aa11.12□□□□□ -0.63
DHFR-206ENST00000513048 CRKP46108 304 aa11.12□□□□□ -0.63
DHFR-206ENST00000513048 SCNN1DP51172 638 aa11.12□□□□□ -0.63
DHFR-206ENST00000513048 EXOSC10Q01780 885 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms